Comprehensive prediction of secondary metabolite structure and biological activity from microbial genome sequences
Skinnider, Michael A, Johnston, Chad W, Gunabalasingam, Mathusan, Merwin, Nishanth J, Kieliszek, Agata M, MacLellan, Robyn J, Li, Haoxin, Ranieri, Michael R M, Webster, Andrew L H, Cao, My P T, Pfeifle, Annabelle, Spencer, Norman, To, Q Huy, Wallace, Dan Peter, Dejong, Chris A, Magarvey, Nathan A
Published in Nature communications (27.11.2020)
Published in Nature communications (27.11.2020)
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Journal Article
Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM)
Skinnider, Michael A, Dejong, Chris A, Rees, Philip N, Johnston, Chad W, Li, Haoxin, Webster, Andrew L H, Wyatt, Morgan A, Magarvey, Nathan A
Published in Nucleic acids research (16.11.2015)
Published in Nucleic acids research (16.11.2015)
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Journal Article
DeepRiPP integrates multiomics data to automate discovery of novel ribosomally synthesized natural products
Merwin, Nishanth J., Mousa, Walaa K., Dejong, Chris A., Skinnider, Michael A., Cannon, Michael J., Li, Haoxin, Dial, Keshav, Gunabalasingam, Mathusan, Johnston, Chad, Magarvey, Nathan A.
Published in Proceedings of the National Academy of Sciences - PNAS (07.01.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (07.01.2020)
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Genomic charting of ribosomally synthesized natural product chemical space facilitates targeted mining
Skinnider, Michael A., Johnston, Chad W., Edgar, Robyn E., Dejong, Chris A., Merwin, Nishanth J., Rees, Philip N., Magarvey, Nathan A.
Published in Proceedings of the National Academy of Sciences - PNAS (18.10.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (18.10.2016)
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Journal Article
Global analysis of prokaryotic tRNA-derived cyclodipeptide biosynthesis
Skinnider, Michael A, Johnston, Chad W, Merwin, Nishanth J, Dejong, Chris A, Magarvey, Nathan A
Published in BMC genomics (15.01.2018)
Published in BMC genomics (15.01.2018)
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Journal Article
Comparative analysis of chemical similarity methods for modular natural products with a hypothetical structure enumeration algorithm
Skinnider, Michael A., Dejong, Chris A., Franczak, Brian C., McNicholas, Paul D., Magarvey, Nathan A.
Published in Journal of cheminformatics (16.08.2017)
Published in Journal of cheminformatics (16.08.2017)
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Journal Article
Polyketide and nonribosomal peptide retro-biosynthesis and global gene cluster matching
Dejong, Chris A, Chen, Gregory M, Li, Haoxin, Johnston, Chad W, Edwards, Mclean R, Rees, Philip N, Skinnider, Michael A, Webster, Andrew L H, Magarvey, Nathan A
Published in Nature chemical biology (03.10.2016)
Published in Nature chemical biology (03.10.2016)
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Journal Article
Polyketide and nonribosomal peptide retro-biosynthesis and global gene cluster matching
Dejong, Chris A, Chen, Gregory M, Li, Haoxin, Johnston, Chad W, Edwards, Mclean R, Rees, Philip N, Skinnider, Michael A, Webster, Andrew L H, Magarvey, Nathan A
Published in Nature chemical biology (01.12.2016)
Published in Nature chemical biology (01.12.2016)
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Artificial intelligence for natural product drug discovery
Mullowney, Michael W, Duncan, Katherine R, Elsayed, Somayah S, Garg, Neha, van der Hooft, Justin J J, Martin, Nathaniel I, Meijer, David, Terlouw, Barbara R, Biermann, Friederike, Blin, Kai, Durairaj, Janani, Gorostiola González, Marina, Helfrich, Eric J N, Huber, Florian, Leopold-Messer, Stefan, Rajan, Kohulan, de Rond, Tristan, van Santen, Jeffrey A, Sorokina, Maria, Balunas, Marcy J, Beniddir, Mehdi A, van Bergeijk, Doris A, Carroll, Laura M, Clark, Chase M, Clevert, Djork-Arné, Dejong, Chris A, Du, Chao, Ferrinho, Scarlet, Grisoni, Francesca, Hofstetter, Albert, Jespers, Willem, Kalinina, Olga V, Kautsar, Satria A, Kim, Hyunwoo, Leao, Tiago F, Masschelein, Joleen, Rees, Evan R, Reher, Raphael, Reker, Daniel, Schwaller, Philippe, Segler, Marwin, Skinnider, Michael A, Walker, Allison S, Willighagen, Egon L, Zdrazil, Barbara, Ziemert, Nadine, Goss, Rebecca J M, Guyomard, Pierre, Volkamer, Andrea, Gerwick, William H, Kim, Hyun Uk, Müller, Rolf, van Wezel, Gilles P, van Westen, Gerard J P, Hirsch, Anna K H, Linington, Roger G, Robinson, Serina L, Medema, Marnix H
Published in Nature reviews. Drug discovery (01.11.2023)
Published in Nature reviews. Drug discovery (01.11.2023)
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