Top-down proteomics reveals a unique protein S-thiolation switch in Salmonella Typhimurium in response to infection-like conditions
Ansong, Charles, Wu, Si, Da Meng, Liu, Xiaowen, Brewer, Heather M., Kaiser, Brooke L. Deatherage, Nakayasu, Ernesto S., Cort, John R., Pevzner, Pavel, Smith, Richard D., Heffron, Fred, Adkins, Joshua N., Paša-Tolić, Ljiljana
Published in Proceedings of the National Academy of Sciences - PNAS (18.06.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (18.06.2013)
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Journal Article
Phosphate-Containing Polyethylene Glycol Polymers Prevent Lethal Sepsis by Multidrug-Resistant Pathogens
ZABORIN, Alexander, DEFAZIO, Jennifer R, GOLDFELD, David, FIRESTONE, Millicent A, COLLIER, Joel H, JABRI, Bana, TIRRELL, Matthew, ZABORINA, Olga, ALVERDY, John C, KADE, Matthew, DEATHERAGE KAISER, Brooke L, BELOGORTSEVA, Natalia, CAMP, David G, SMITH, Richard D, ADKINS, Joshua N, KIM, Sangman M, ALVERDY, Alexandria
Published in Antimicrobial Agents and Chemotherapy (01.02.2014)
Published in Antimicrobial Agents and Chemotherapy (01.02.2014)
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Journal Article
A Multi-Omic View of Host-Pathogen-Commensal Interplay in Salmonella-Mediated Intestinal Infection
Deatherage Kaiser, Brooke L, Li, Jie, Sanford, James A, Kim, Young-Mo, Kronewitter, Scott R, Jones, Marcus B, Peterson, Christine T, Peterson, Scott N, Frank, Bryan C, Purvine, Samuel O, Brown, Joseph N, Metz, Thomas O, Smith, Richard D, Heffron, Fred, Adkins, Joshua N
Published in PloS one (26.06.2013)
Published in PloS one (26.06.2013)
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Journal Article
Unified feature association networks through integration of transcriptomic and proteomic data
McClure, Ryan S, Wendler, Jason P, Adkins, Joshua N, Swanstrom, Jesica, Baric, Ralph, Kaiser, Brooke L Deatherage, Oxford, Kristie L, Waters, Katrina M, McDermott, Jason E
Published in PLoS computational biology (17.09.2019)
Published in PLoS computational biology (17.09.2019)
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Journal Article
Proteomic analysis of four Clostridium botulinum strains identifies proteins that link biological responses to proteomic signatures
Deatherage Kaiser, Brooke L, Hill, Karen K, Smith, Theresa J, Williamson, Charles H D, Keim, Paul, Sahl, Jason W, Wahl, Karen L
Published in PloS one (15.10.2018)
Published in PloS one (15.10.2018)
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Journal Article
Mutations in global regulators lead to metabolic selection during adaptation to complex environments
Saxer, Gerda, Krepps, Michael D, Merkley, Eric D, Ansong, Charles, Deatherage Kaiser, Brooke L, Valovska, Marie-Thérèse, Ristic, Nikola, Yeh, Ping T, Prakash, Vittal P, Leiser, Owen P, Nakhleh, Luay, Gibbons, Henry S, Kreuzer, Helen W, Shamoo, Yousif
Published in PLoS genetics (01.12.2014)
Published in PLoS genetics (01.12.2014)
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Journal Article
Polysaccharide-based liquid storage and transport media for non-refrigerated preservation of bacterial pathogens
Hutchison, Janine R, Brooks, Shelby M, Kennedy, Zachary C, Pope, Timothy R, Deatherage Kaiser, Brooke L, Victry, Kristin D, Warner, Cynthia L, Oxford, Kristie L, Omberg, Kristin M, Warner, Marvin G
Published in PloS one (06.09.2019)
Published in PloS one (06.09.2019)
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Journal Article
Optimizing metaproteomics database construction: lessons from a study of the vaginal microbiome
Lee, Elliot M, Srinivasan, Sujatha, Purvine, Samuel O, Fiedler, Tina L, Leiser, Owen P, Proll, Sean C, Minot, Samuel S, Deatherage Kaiser, Brooke L, Fredricks, David N
Published in mSystems (23.06.2023)
Published in mSystems (23.06.2023)
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Journal Article
Salmonella serotype determination utilizing high-throughput genome sequencing data
Zhang, Shaokang, Yin, Yanlong, Jones, Marcus B, Zhang, Zhenzhen, Deatherage Kaiser, Brooke L, Dinsmore, Blake A, Fitzgerald, Collette, Fields, Patricia I, Deng, Xiangyu
Published in Journal of clinical microbiology (01.05.2015)
Published in Journal of clinical microbiology (01.05.2015)
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Journal Article
Protein abundances can distinguish between naturally-occurring and laboratory strains of Yersinia pestis, the causative agent of plague
Merkley, Eric D, Sego, Landon H, Lin, Andy, Leiser, Owen P, Kaiser, Brooke L Deatherage, Adkins, Joshua N, Keim, Paul S, Wagner, David M, Kreuzer, Helen W
Published in PloS one (30.08.2017)
Published in PloS one (30.08.2017)
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Journal Article
Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach
Leiser, Owen P, Merkley, Eric D, Clowers, Brian H, Deatherage Kaiser, Brooke L, Lin, Andy, Hutchison, Janine R, Melville, Angela M, Wagner, David M, Keim, Paul S, Foster, Jeffrey T, Kreuzer, Helen W
Published in PloS one (24.11.2015)
Published in PloS one (24.11.2015)
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Journal Article
A multi-omic systems approach to elucidating Yersinia virulence mechanisms
Ansong, Charles, Schrimpe-Rutledge, Alexandra C, Mitchell, Hugh D, Chauhan, Sadhana, Jones, Marcus B, Kim, Young-Mo, McAteer, Kathleen, Deatherage Kaiser, Brooke L, Dubois, Jennifer L, Brewer, Heather M, Frank, Bryan C, McDermott, Jason E, Metz, Thomas O, Peterson, Scott N, Smith, Richard D, Motin, Vladimir L, Adkins, Joshua N
Published in Molecular bioSystems (01.01.2013)
Published in Molecular bioSystems (01.01.2013)
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Journal Article
Measurement of Fructose–Asparagine Concentrations in Human and Animal Foods
Wu, Jikang, Sabag-Daigle, Anice, Metz, Thomas O, Deatherage Kaiser, Brooke L, Gopalan, Venkat, Behrman, Edward J, Wysocki, Vicki H, Ahmer, Brian M. M
Published in Journal of agricultural and food chemistry (10.01.2018)
Published in Journal of agricultural and food chemistry (10.01.2018)
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Journal Article
Salmonella-Mediated Inflammation Eliminates Competitors for Fructose-Asparagine in the Gut
Wu, Jikang, Sabag-Daigle, Anice, Borton, Mikayla A, Kop, Linnea F M, Szkoda, Blake E, Deatherage Kaiser, Brooke L, Lindemann, Stephen R, Renslow, Ryan S, Wei, Siwei, Nicora, Carrie D, Weitz, Karl K, Kim, Young-Mo, Adkins, Joshua N, Metz, Thomas O, Boyaka, Prosper, Gopalan, Venkat, Wrighton, Kelly C, Wysocki, Vicki H, Ahmer, Brian M M
Published in Infection and immunity (01.05.2018)
Published in Infection and immunity (01.05.2018)
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Journal Article
Insights into PG‐binding, conformational change, and dimerization of the OmpA C‐terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi
Tan, Kemin, Deatherage Kaiser, Brooke L., Wu, Ruiying, Cuff, Marianne, Fan, Yao, Bigelow, Lance, Jedrzejczak, Robert P., Adkins, Joshua N., Cort, John R., Babnigg, Gyorgy, Joachimiak, Andrzej
Published in Protein science (01.09.2017)
Published in Protein science (01.09.2017)
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Journal Article
LipidOz enables automated elucidation of lipid carbon–carbon double bond positions from ozone-induced dissociation mass spectrometry data
Ross, Dylan H., Lee, Joon-Yong, Bilbao, Aivett, Orton, Daniel J., Eder, Josie G., Burnet, Meagan C., Deatherage Kaiser, Brooke L., Kyle, Jennifer E., Zheng, Xueyun
Published in Communications chemistry (19.04.2023)
Published in Communications chemistry (19.04.2023)
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Journal Article
Improved proteomic analysis following trichloroacetic acid extraction of Bacillus anthracis spore proteins
Deatherage Kaiser, Brooke L., Wunschel, David S., Sydor, Michael A., Warner, Marvin G., Wahl, Karen L., Hutchison, Janine R.
Published in Journal of microbiological methods (01.11.2015)
Published in Journal of microbiological methods (01.11.2015)
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Journal Article
Assessment of the Utility of the Oral Fluid and Plasma Proteomes for Hydrocodone Exposure
Deatherage Kaiser, Brooke L., Jacobs, Jon M., Schepmoes, Athena A., Brewer, Heather M., Webb-Robertson, Bobbie-Jo M., Valtier, Sandra, Bebarta, Vikhyat S., Adkins, Joshua N.
Published in Journal of medical toxicology (01.01.2020)
Published in Journal of medical toxicology (01.01.2020)
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Journal Article
Identification of Salmonella Typhimurium Deubiquitinase SseL Substrates by Immunoaffinity Enrichment and Quantitative Proteomic Analysis
Nakayasu, Ernesto S, Sydor, Michael A, Brown, Roslyn N, Sontag, Ryan L, Sobreira, Tiago J. P, Slysz, Gordon W, Humphrys, Daniel R, Skarina, Tatiana, Onoprienko, Olena, Di Leo, Rosa, Deatherage Kaiser, Brooke L, Li, Jie, Ansong, Charles, Cambronne, Eric D, Smith, Richard D, Savchenko, Alexei, Adkins, Joshua N
Published in Journal of proteome research (04.09.2015)
Published in Journal of proteome research (04.09.2015)
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Journal Article
Salmonella modulates metabolism during growth under conditions that induce expression of virulence genes
Kim, Young-Mo, Schmidt, Brian J, Kidwai, Afshan S, Jones, Marcus B, Deatherage Kaiser, Brooke L, Brewer, Heather M, Mitchell, Hugh D, Palsson, Bernhard O, McDermott, Jason E, Heffron, Fred, Smith, Richard D, Peterson, Scott N, Ansong, Charles, Hyduke, Daniel R, Metz, Thomas O, Adkins, Joshua N
Published in Molecular bioSystems (01.01.2013)
Published in Molecular bioSystems (01.01.2013)
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Journal Article