RNA-SeQC: RNA-seq metrics for quality control and process optimization
DELUCA, David S, LEVIN, Joshua Z, SIVACHENKO, Andrey, FENNELL, Timothy, NAZAIRE, Marc-Danie, WILLIAMS, Chris, REICH, Michael, WINCKLER, Wendy, GETZ, Gad
Published in Bioinformatics (Oxford, England) (01.06.2012)
Published in Bioinformatics (Oxford, England) (01.06.2012)
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Journal Article
The human transcriptome across tissues and individuals
Melé, Marta, Ferreira, Pedro G., Reverter, Ferran, DeLuca, David S., Monlong, Jean, Sammeth, Michael, Young, Taylor R., Goldmann, Jakob M, Pervouchine, Dmitri D., Sullivan, Timothy J., Johnson, Rory, Segrè, Ayellet V., Djebali, Sarah, Niarchou, Anastasia, Wright, Fred A., Lappalainen, Tuuli, Calvo, Miquel, Getz, Gad, Dermitzakis, Emmanouil T., Ardlie, Kristin G., Guigó, Roderic
Published in Science (American Association for the Advancement of Science) (08.05.2015)
Published in Science (American Association for the Advancement of Science) (08.05.2015)
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Journal Article
Comparative analysis of RNA sequencing methods for degraded or low-input samples
Adiconis, Xian, Borges-Rivera, Diego, Satija, Rahul, DeLuca, David S, Busby, Michele A, Berlin, Aaron M, Sivachenko, Andrey, Thompson, Dawn Anne, Wysoker, Alec, Fennell, Timothy, Gnirke, Andreas, Pochet, Nathalie, Regev, Aviv, Levin, Joshua Z
Published in Nature methods (01.07.2013)
Published in Nature methods (01.07.2013)
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Journal Article
Understanding explanatory mechanisms for racial and ethnic differences in mental health stigma: the role of vertical individualism and right-wing authoritarianism
DeLuca, Joseph S., Hwang, Junseon, Stepinski, Lauren, Yanos, Philip T.
Published in Journal of mental health (Abingdon, England) (01.02.2022)
Published in Journal of mental health (Abingdon, England) (01.02.2022)
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Journal Article
A pan-cancer analysis of transcriptome changes associated with somatic mutations in U2AF1 reveals commonly altered splicing events
Brooks, Angela N, Choi, Peter S, de Waal, Luc, Sharifnia, Tanaz, Imielinski, Marcin, Saksena, Gordon, Pedamallu, Chandra Sekhar, Sivachenko, Andrey, Rosenberg, Mara, Chmielecki, Juliann, Lawrence, Michael S, DeLuca, David S, Getz, Gad, Meyerson, Matthew
Published in PloS one (31.01.2014)
Published in PloS one (31.01.2014)
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Journal Article
IL‐17 regulates DC migration to the peribronchial LNs and allergen presentation in experimental allergic asthma
Jirmo, Adan Chari, Busse, Mandy, Happle, Christine, Skuljec, Jelena, Dalüge, Kathleen, Habener, Anika, Grychtol, Ruth, DeLuca, David S., Breiholz, Oliver D., Prinz, Immo, Hansen, Gesine
Published in European journal of immunology (01.07.2020)
Published in European journal of immunology (01.07.2020)
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Journal Article
Loss of Serpina1 in Mice Leads to Altered Gene Expression in Inflammatory and Metabolic Pathways
Meghadri, Sri Harsha, Martinez-Delgado, Beatriz, Ostermann, Lena, Gomez-Mariano, Gema, Perez-Luz, Sara, Tumpara, Srinu, Wrenger, Sabine, DeLuca, David S., Maus, Ulrich A., Welte, Tobias, Janciauskiene, Sabina
Published in International journal of molecular sciences (09.09.2022)
Published in International journal of molecular sciences (09.09.2022)
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Journal Article
Distinct metabolic responses to heme in inflammatory human and mouse macrophages – Role of nitric oxide
Pradhan, Pooja, Vijayan, Vijith, Liu, Bin, Martinez-Delgado, Beatriz, Matamala, Nerea, Nikolin, Christoph, Greite, Robert, DeLuca, David S., Janciauskiene, Sabina, Motterlini, Roberto, Foresti, Roberta, Immenschuh, Stephan
Published in Redox biology (01.07.2024)
Published in Redox biology (01.07.2024)
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Journal Article
Cross-sectional and prospective correlates of associative stigma among mental health service providers
Yanos, Philip T, DeLuca, Joseph S, Salyers, Michelle P, Fischer, Melanie W, Song, Jennifer, Caro, Juliana
Published in Psychiatric rehabilitation journal (01.06.2020)
Published in Psychiatric rehabilitation journal (01.06.2020)
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Journal Article
Filtration and Normalization of Sequencing Read Data in Whole-Metagenome Shotgun Samples
Chouvarine, Philippe, Wiehlmann, Lutz, Moran Losada, Patricia, DeLuca, David S, Tümmler, Burkhard
Published in PloS one (19.10.2016)
Published in PloS one (19.10.2016)
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Journal Article
Molecular profiling of rheumatoid arthritis patients reveals an association between innate and adaptive cell populations and response to anti-tumor necrosis factor
Farutin, Victor, Prod'homme, Thomas, McConnell, Kevin, Washburn, Nathaniel, Halvey, Patrick, Etzel, Carol J, Guess, Jamey, Duffner, Jay, Getchell, Kristen, Meccariello, Robin, Gutierrez, Bryan, Honan, Christopher, Zhao, Ganlin, Cilfone, Nicholas A, Gunay, Nur Sibel, Hillson, Jan L, DeLuca, David S, Saunders, Katherine C, Pappas, Dimitrios A, Greenberg, Jeffrey D, Kremer, Joel M, Manning, Anthony M, Ling, Leona E, Capila, Ishan
Published in Arthritis research & therapy (23.10.2019)
Published in Arthritis research & therapy (23.10.2019)
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Journal Article
MicroRNA-449a Inhibits Triple Negative Breast Cancer by Disturbing DNA Repair and Chromatid Separation
Vajen, Beate, Bhowmick, Rahul, Greiwe, Luisa, Schäffer, Vera, Eilers, Marlies, Reinkens, Thea, Stalke, Amelie, Schmidt, Gunnar, Fiedler, Jan, Thum, Thomas, DeLuca, David S, Hickson, Ian D, Schlegelberger, Brigitte, Illig, Thomas, Skawran, Britta
Published in International journal of molecular sciences (04.05.2022)
Published in International journal of molecular sciences (04.05.2022)
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Journal Article
The Delivery of α1-Antitrypsin Therapy Through Transepidermal Route: Worthwhile to Explore
Tumpara, Srinu, Martinez-Delgado, Beatriz, Gomez-Mariano, Gema, Liu, Bin, DeLuca, David S., Korenbaum, Elena, Jonigk, Danny, Jugert, Frank, Wurm, Florian M., Wurm, Maria J., Welte, Tobias, Janciauskiene, Sabina
Published in Frontiers in pharmacology (03.07.2020)
Published in Frontiers in pharmacology (03.07.2020)
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Journal Article
Review of factors resulting in systemic biases in the screening, assessment, and treatment of individuals at clinical high-risk for psychosis in the United States
Bridgwater, Miranda A, Petti, Emily, Giljen, Maksim, Akouri-Shan, LeeAnn, DeLuca, Joseph S, Rakhshan Rouhakhtar, Pamela, Millar, Caroline, Karcher, Nicole R, Martin, Elizabeth A, DeVylder, Jordan, Anglin, Deidre, Williams, Raquel, Ellman, Lauren M, Mittal, Vijay A, Schiffman, Jason
Published in Frontiers in psychiatry (13.03.2023)
Published in Frontiers in psychiatry (13.03.2023)
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Journal Article
Smokers with COPD Show a Shift in Energy and Nitrogen Metabolism at Rest and During Exercise
Holz, Olaf, DeLuca, David S, Roepcke, Stefan, Illig, Thomas, Weinberger, Klaus M, Schudt, Christian, Hohlfeld, Jens M
Published in International journal of chronic obstructive pulmonary disease (01.01.2020)
Published in International journal of chronic obstructive pulmonary disease (01.01.2020)
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Journal Article
Lung Adenocarcinoma Cell Sensitivity to Chemotherapies: A Spotlight on Lipid Droplets and SREBF1 Gene
Gründing, Anna Ricarda, Schneider, Marc A., Richtmann, Sarah, Kriegsmann, Mark, Winter, Hauke, Martinez-Delgado, Beatriz, Varona, Sarai, Liu, Bin, DeLuca, David S., Held, Julia, Wrenger, Sabine, Muley, Thomas, Meister, Michael, Welte, Tobias, Janciauskiene, Sabina
Published in Cancers (14.09.2022)
Published in Cancers (14.09.2022)
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