Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress
Yun, Kil-Young, Mohanty, Bijayalaxmi, Herath, Venura, Xu, Fuyu, Mauleon, Ramil, Wijaya, Edward, Bajic, Vladimir B, Bruskiewich, Richard, Reyes, Benildo G. de los
Published in BMC plant biology (25.01.2010)
Published in BMC plant biology (25.01.2010)
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An early response regulatory cluster induced by low temperature and hydrogen peroxide in seedlings of chilling-tolerant japonica rice
Cheng, Chen, Yun, Kil-Young, Ressom, Habtom W, Mohanty, Bijayalaxmi, Bajic, Vladimir B, Jia, Yulin, Yun, Song Joong, de los Reyes, Benildo G
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Published in BMC genomics (18.06.2007)
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Potential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementation
Kitazumi, Ai, Pabuayon, Isaiah C M, Ohyanagi, Hajime, Fujita, Masahiro, Osti, Bipush, Shenton, Matthew R, Kakei, Yusuke, Nakamura, Yasukazu, Brar, Darshan S, Kurata, Nori, de Los Reyes, Benildo G
Published in Scientific reports (05.11.2018)
Published in Scientific reports (05.11.2018)
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Cis-regulatory signatures of orthologous stress-associated bZIP transcription factors from rice, sorghum and Arabidopsis based on phylogenetic footprints
Xu, Fuyu, Park, Myoung-Ryoul, Kitazumi, Ai, Herath, Venura, Mohanty, Bijayalaxmi, Yun, Song Joong, de los Reyes, Benildo G
Published in BMC genomics (20.09.2012)
Published in BMC genomics (20.09.2012)
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Novel allelic variation in the Phospholipase D alpha1 gene (OsPLDα1) of wild Oryza species implies to its low expression in rice bran
Kaur, Amandeep, Neelam, Kumari, Kaur, Karminderbir, Kitazumi, Ai, de Los Reyes, Benildo G, Singh, Kuldeep
Published in Scientific reports (20.04.2020)
Published in Scientific reports (20.04.2020)
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MicroRNA-mediated host defense mechanisms against pathogens and herbivores in rice: balancing gains from genetic resistance with trade-offs to productivity potential
Kumar, Kishor, Mandal, Swarupa Nanda, Neelam, Kumari, de los Reyes, Benildo G
Published in BMC plant biology (18.07.2022)
Published in BMC plant biology (18.07.2022)
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Simultaneous Colorimetric Detection of a Variety of Salmonella spp. in Food and Environmental Samples by Optical Biosensing Using Oligonucleotide-Gold Nanoparticles
Quintela, Irwin A, de Los Reyes, Benildo G, Lin, Chih-Sheng, Wu, Vivian C H
Published in Frontiers in microbiology (31.05.2019)
Published in Frontiers in microbiology (31.05.2019)
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Responses of Escherichia coli and Listeria monocytogenes to ozone treatment on non-host tomato: Efficacy of intervention and evidence of induced acclimation
Shu, Xiaomei, Singh, Manavi, Karampudi, Naga Bhushana Rao, Bridges, David F, Kitazumi, Ai, Wu, Vivian C. H, De los Reyes, Benildo G
Published in PloS one (28.10.2021)
Published in PloS one (28.10.2021)
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Novel and Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice Created by Physiological Coupling-Uncoupling and Network Rewiring Effects
Pabuayon, Isaiah C M, Kitazumi, Ai, Cushman, Kevin R, Singh, Rakesh Kumar, Gregorio, Glenn B, Dhatt, Balpreet, Zabet-Moghaddam, Masoud, Walia, Harkamal, de Los Reyes, Benildo G
Published in Frontiers in plant science (23.02.2021)
Published in Frontiers in plant science (23.02.2021)
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Networks of Physiological Adjustments and Defenses, and Their Synergy With Sodium (Na + ) Homeostasis Explain the Hidden Variation for Salinity Tolerance Across the Cultivated Gossypium hirsutum Germplasm
Cushman, Kevin R, Pabuayon, Isaiah C M, Hinze, Lori L, Sweeney, Megan E, de Los Reyes, Benildo G
Published in Frontiers in plant science (08.12.2020)
Published in Frontiers in plant science (08.12.2020)
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Metagenomic investigation reveals bacteriophage-mediated horizontal transfer of antibiotic resistance genes in microbial communities of an organic agricultural ecosystem
Zhang, Yujie, Kitazumi, Ai, Liao, Yen-Te, de los Reyes, Benildo G., Wu, Vivian C. H.
Published in Microbiology spectrum (01.10.2023)
Published in Microbiology spectrum (01.10.2023)
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Xenobiotic Effects of Chlorine Dioxide to Escherichia coli O157:H7 on Non-host Tomato Environment Revealed by Transcriptional Network Modeling: Implications to Adaptation and Selection
Shu, Xiaomei, Singh, Manavi, Karampudi, Naga Bhushana Rao, Bridges, David F., Kitazumi, Ai, Wu, Vivian C. H., De los Reyes, Benildo G.
Published in Frontiers in microbiology (03.06.2020)
Published in Frontiers in microbiology (03.06.2020)
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Contributions of Adaptive Plant Architecture to Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice: Molecular Mechanisms Based on Transcriptional Networks
Pabuayon, Isaiah Catalino M, Kitazumi, Ai, Gregorio, Glenn B, Singh, Rakesh Kumar, de Los Reyes, Benildo G
Published in Frontiers in genetics (23.10.2020)
Published in Frontiers in genetics (23.10.2020)
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Reverse engineering module networks by PSO-RNN hybrid modeling
Zhang, Yuji, Xuan, Jianhua, de los Reyes, Benildo G, Clarke, Robert, Ressom, Habtom W
Published in BMC genomics (07.07.2009)
Published in BMC genomics (07.07.2009)
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