Variation graph toolkit improves read mapping by representing genetic variation in the reference
Garrison, Erik, Sirén, Jouni, Novak, Adam M, Hickey, Glenn, Eizenga, Jordan M, Dawson, Eric T, Jones, William, Garg, Shilpa, Markello, Charles, Lin, Michael F, Paten, Benedict, Durbin, Richard
Published in Nature biotechnology (01.10.2018)
Published in Nature biotechnology (01.10.2018)
Get full text
Journal Article
Genotyping structural variants in pangenome graphs using the vg toolkit
Hickey, Glenn, Heller, David, Monlong, Jean, Sibbesen, Jonas A, Sirén, Jouni, Eizenga, Jordan, Dawson, Eric T, Garrison, Erik, Novak, Adam M, Paten, Benedict
Published in Genome Biology (12.02.2020)
Published in Genome Biology (12.02.2020)
Get full text
Journal Article
Discovery, Synthesis, And Structure-Based Optimization of a Series of N‑(tert-Butyl)-2‑(N‑arylamido)-2-(pyridin-3-yl) Acetamides (ML188) as Potent Noncovalent Small Molecule Inhibitors of the Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) 3CL Protease
Jacobs, Jon, Grum-Tokars, Valerie, Zhou, Ya, Turlington, Mark, Saldanha, S. Adrian, Chase, Peter, Eggler, Aimee, Dawson, Eric S, Baez-Santos, Yahira M, Tomar, Sakshi, Mielech, Anna M, Baker, Susan C, Lindsley, Craig W, Hodder, Peter, Mesecar, Andrew, Stauffer, Shaun R
Published in Journal of medicinal chemistry (24.01.2013)
Published in Journal of medicinal chemistry (24.01.2013)
Get full text
Journal Article
ReactomeFIViz: a Cytoscape app for pathway and network-based data analysis
Wu, Guanming, Dawson, Eric, Duong, Adrian, Haw, Robin, Stein, Lincoln
Published in F1000 research (2014)
Published in F1000 research (2014)
Get full text
Journal Article
Genomic characterization of cervical lymph node metastases in papillary thyroid carcinoma following the Chornobyl accident
Morton, Lindsay M., Lee, Olivia W., Karyadi, Danielle M., Bogdanova, Tetiana I., Stewart, Chip, Hartley, Stephen W., Breeze, Charles E., Schonfeld, Sara J., Cahoon, Elizabeth K., Drozdovitch, Vladimir, Masiuk, Sergii, Chepurny, Mykola, Zurnadzhy, Liudmyla Yu, Dai, Jieqiong, Krznaric, Marko, Yeager, Meredith, Hutchinson, Amy, Hicks, Belynda D., Dagnall, Casey L., Steinberg, Mia K., Jones, Kristine, Jain, Komal, Jordan, Ben, Machiela, Mitchell J., Dawson, Eric T., Vij, Vibha, Gastier-Foster, Julie M., Bowen, Jay, Mabuchi, Kiyohiko, Hatch, Maureen, Berrington de Gonzalez, Amy, Getz, Gad, Tronko, Mykola D., Thomas, Gerry A., Chanock, Stephen J.
Published in Nature communications (13.06.2024)
Published in Nature communications (13.06.2024)
Get full text
Journal Article
Viral coinfection analysis using a MinHash toolkit
Dawson, Eric T, Wagner, Sarah, Roberson, David, Yeager, Meredith, Boland, Joseph, Garrison, Erik, Chanock, Stephen, Schiffman, Mark, Raine-Bennett, Tina, Lorey, Thomas, Castle, Phillip E, Mirabello, Lisa, Durbin, Richard
Published in BMC bioinformatics (12.07.2019)
Published in BMC bioinformatics (12.07.2019)
Get full text
Journal Article
Predicting Evolutionary Site Variability from Structure in Viral Proteins: Buriedness, Packing, Flexibility, and Design
Shahmoradi, Amir, Sydykova, Dariya K., Spielman, Stephanie J., Jackson, Eleisha L., Dawson, Eric T., Meyer, Austin G., Wilke, Claus O.
Published in Journal of molecular evolution (01.10.2014)
Published in Journal of molecular evolution (01.10.2014)
Get full text
Journal Article
Limited utility of residue masking for positive-selection inference
Spielman, Stephanie J, Dawson, Eric T, Wilke, Claus O
Published in Molecular biology and evolution (01.09.2014)
Published in Molecular biology and evolution (01.09.2014)
Get full text
Journal Article
Optimized Translocator Protein Ligand for Optical Molecular Imaging and Screening
Li, Jun, Smith, Jarrod A, Dawson, Eric S, Fu, Allie, Nickels, Michael L, Schulte, Michael L, Manning, H. Charles
Published in Bioconjugate chemistry (19.04.2017)
Published in Bioconjugate chemistry (19.04.2017)
Get full text
Journal Article
A Peptide-Based Positron Emission Tomography Probe for In Vivo Detection of Caspase Activity in Apoptotic Cells
HIGHT, Matthew R, CHEUNG, Yiu-Yin, MANNING, H. Charles, NICKELS, Michael L, DAWSON, Eric S, PING ZHAO, SALEH, Samir, BUCK, Jason R, DEWEI TANG, WASHINGTON, M. Kay, COFFEY, Robert J
Published in Clinical cancer research (15.04.2014)
Published in Clinical cancer research (15.04.2014)
Get full text
Journal Article
Development of a selective small-molecule inhibitor of Kir1.1, the renal outer medullary potassium channel
Bhave, Gautam, Chauder, Brian A, Liu, Wen, Dawson, Eric S, Kadakia, Rishin, Nguyen, Thuy T, Lewis, L Michelle, Meiler, Jens, Weaver, C David, Satlin, Lisa M, Lindsley, Craig W, Denton, Jerod S
Published in Molecular pharmacology (01.01.2011)
Published in Molecular pharmacology (01.01.2011)
Get full text
Journal Article
A crowdsourced set of curated structural variants for the human genome
Chapman, Lesley M, Spies, Noah, Pai, Patrick, Lim, Chun Shen, Carroll, Andrew, Narzisi, Giuseppe, Watson, Christopher M, Proukakis, Christos, Clarke, Wayne E, Nariai, Naoki, Dawson, Eric, Jones, Garan, Blankenberg, Daniel, Brueffer, Christian, Xiao, Chunlin, Kolora, Sree Rohit Raj, Alexander, Noah, Wolujewicz, Paul, Ahmed, Azza E, Smith, Graeme, Shehreen, Saadlee, Wenger, Aaron M, Salit, Marc, Zook, Justin M
Published in PLoS computational biology (19.06.2020)
Published in PLoS computational biology (19.06.2020)
Get full text
Journal Article
Selective inhibition of the K(ir)2 family of inward rectifier potassium channels by a small molecule probe: the discovery, SAR, and pharmacological characterization of ML133
Wang, Hao-Ran, Wu, Meng, Yu, Haibo, Long, Shunyou, Stevens, Amy, Engers, Darren W, Sackin, Henry, Daniels, J Scott, Dawson, Eric S, Hopkins, Corey R, Lindsley, Craig W, Li, Min, McManus, Owen B
Published in ACS chemical biology (19.08.2011)
Published in ACS chemical biology (19.08.2011)
Get full text
Journal Article
A Model for the Solution Structure of the Rod Arrestin Tetramer
Hanson, Susan M., Dawson, Eric S., Francis, Derek J., Van Eps, Ned, Klug, Candice S., Hubbell, Wayne L., Meiler, Jens, Gurevich, Vsevolod V.
Published in Structure (London) (01.06.2008)
Published in Structure (London) (01.06.2008)
Get full text
Journal Article