Exploring power and parameter estimation of the BiSSE method for analyzing species diversification
Davis, Matthew P, Midford, Peter E, Maddison, Wayne
Published in BMC evolutionary biology (11.02.2013)
Published in BMC evolutionary biology (11.02.2013)
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Journal Article
Resolution of ray-finned fish phylogeny and timing of diversification
Near, Thomas J., Eytan, Ron I., Dornburg, Alex, Kuhn, Kristen L., Moore, Jon A., Davis, Matthew P., Wainwright, Peter C., Friedman, Matt, Smith, W. Leo
Published in Proceedings of the National Academy of Sciences - PNAS (21.08.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (21.08.2012)
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Journal Article
A high-resolution mRNA expression time course of embryonic development in zebrafish
White, Richard J, Collins, John E, Sealy, Ian M, Wali, Neha, Dooley, Christopher M, Digby, Zsofia, Stemple, Derek L, Murphy, Daniel N, Billis, Konstantinos, Hourlier, Thibaut, Füllgrabe, Anja, Davis, Matthew P, Enright, Anton J, Busch-Nentwich, Elisabeth M
Published in eLife (16.11.2017)
Published in eLife (16.11.2017)
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Journal Article
Extracellular Vesicles from Neural Stem Cells Transfer IFN-γ via Ifngr1 to Activate Stat1 Signaling in Target Cells
Cossetti, Chiara, Iraci, Nunzio, Mercer, Tim R., Leonardi, Tommaso, Alpi, Emanuele, Drago, Denise, Alfaro-Cervello, Clara, Saini, Harpreet K., Davis, Matthew P., Schaeffer, Julia, Vega, Beatriz, Stefanini, Matilde, Zhao, CongJian, Muller, Werner, Garcia-Verdugo, Jose Manuel, Mathivanan, Suresh, Bachi, Angela, Enright, Anton J., Mattick, John S., Pluchino, Stefano
Published in Molecular cell (23.10.2014)
Published in Molecular cell (23.10.2014)
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Journal Article
Large-scale analysis of microRNA expression, epi-transcriptomic features and biogenesis
Vitsios, Dimitrios M, Davis, Matthew P, van Dongen, Stijn, Enright, Anton J
Published in Nucleic acids research (17.02.2017)
Published in Nucleic acids research (17.02.2017)
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Journal Article
MiR-25 regulates Wwp2 and Fbxw7 and promotes reprogramming of mouse fibroblast cells to iPSCs
Lu, Dong, Davis, Matthew P A, Abreu-Goodger, Cei, Wang, Wei, Campos, Lia S, Siede, Julia, Vigorito, Elena, Skarnes, William C, Dunham, Ian, Enright, Anton J, Liu, Pentao
Published in PloS one (17.08.2012)
Published in PloS one (17.08.2012)
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Journal Article
Temporal patterns of diversification across global cichlid biodiversity (Acanthomorpha: Cichlidae)
McMahan, Caleb D, Chakrabarty, Prosanta, Sparks, John S, Smith, W M Leo, Davis, Matthew P
Published in PloS one (19.08.2013)
Published in PloS one (19.08.2013)
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Journal Article
Transposon‐driven transcription is a conserved feature of vertebrate spermatogenesis and transcript evolution
Davis, Matthew P, Carrieri, Claudia, Saini, Harpreet K, van Dongen, Stijn, Leonardi, Tommaso, Bussotti, Giovanni, Monahan, Jack M, Auchynnikava, Tania, Bitetti, Angelo, Rappsilber, Juri, Allshire, Robin C, Shkumatava, Alena, O'Carroll, Dónal, Enright, Anton J
Published in EMBO reports (01.07.2017)
Published in EMBO reports (01.07.2017)
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Journal Article
Biofluorescence in Catsharks (Scyliorhinidae): Fundamental Description and Relevance for Elasmobranch Visual Ecology
Gruber, David F., Loew, Ellis R., Deheyn, Dimitri D., Akkaynak, Derya, Gaffney, Jean P., Smith, W. Leo, Davis, Matthew P., Stern, Jennifer H., Pieribone, Vincent A., Sparks, John S.
Published in Scientific reports (25.04.2016)
Published in Scientific reports (25.04.2016)
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Journal Article
Investigations into the ancestry of the Grape-eye Seabass (Hemilutjanus macrophthalmos) reveal novel limits and relationships for the Acropomatiformes (Teleostei: Percomorpha)
Smith, W. Leo, Ghedotti, Michael J., Domínguez-Domínguez, Omar, McMahan, Caleb D., Espinoza, Eduardo, Martin, Rene P., Girard, Matthew G., Davis, Matthew P.
Published in Neotropical Ichthyology (01.01.2022)
Published in Neotropical Ichthyology (01.01.2022)
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Journal Article
Large-scale identification of microRNA targets in murine Dgcr8-deficient embryonic stem cell lines
Davis, Matthew P A, Abreu-Goodger, Cei, van Dongen, Stijn, Lu, Dong, Tate, Peri H, Bartonicek, Nenad, Kutter, Claudia, Liu, Pentao, Skarnes, William C, Enright, Anton J, Dunham, Ian
Published in PloS one (17.08.2012)
Published in PloS one (17.08.2012)
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Journal Article
Recombinant VP4 of Human Rhinovirus Induces Permeability in Model Membranes
DAVIS, Matthew P, BOTTLEY, Graham, BEALES, Lucy P, KILLINGTON, Richard A, ROWLANDS, David J, TUTHILL, Tobias J
Published in Journal of Virology (01.04.2008)
Published in Journal of Virology (01.04.2008)
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Journal Article
Mirnovo: genome-free prediction of microRNAs from small RNA sequencing data and single-cells using decision forests
Vitsios, Dimitrios M, Kentepozidou, Elissavet, Quintais, Leonor, Benito-Gutiérrez, Elia, van Dongen, Stijn, Davis, Matthew P, Enright, Anton J
Published in Nucleic acids research (01.12.2017)
Published in Nucleic acids research (01.12.2017)
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Journal Article
Evolution of Venomous Cartilaginous and Ray-Finned Fishes
Smith, W. Leo, Stern, Jennifer H., Girard, Matthew G., Davis, Matthew P.
Published in Integrative and comparative biology (01.11.2016)
Published in Integrative and comparative biology (01.11.2016)
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