Large scale genome reconstructions illuminate Wolbachia evolution
Scholz, Matthias, Albanese, Davide, Tuohy, Kieran, Donati, Claudio, Segata, Nicola, Rota-Stabelli, Omar
Published in Nature communications (16.10.2020)
Published in Nature communications (16.10.2020)
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Journal Article
MICCA: a complete and accurate software for taxonomic profiling of metagenomic data
Albanese, Davide, Fontana, Paolo, De Filippo, Carlotta, Cavalieri, Duccio, Donati, Claudio
Published in Scientific reports (19.05.2015)
Published in Scientific reports (19.05.2015)
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Journal Article
Diet, Environments, and Gut Microbiota. A Preliminary Investigation in Children Living in Rural and Urban Burkina Faso and Italy
De Filippo, Carlotta, Di Paola, Monica, Ramazzotti, Matteo, Albanese, Davide, Pieraccini, Giuseppe, Banci, Elena, Miglietta, Franco, Cavalieri, Duccio, Lionetti, Paolo
Published in Frontiers in microbiology (13.10.2017)
Published in Frontiers in microbiology (13.10.2017)
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Journal Article
New evidences on the altered gut microbiota in autism spectrum disorders
Strati, Francesco, Cavalieri, Duccio, Albanese, Davide, De Felice, Claudio, Donati, Claudio, Hayek, Joussef, Jousson, Olivier, Leoncini, Silvia, Renzi, Daniela, Calabrò, Antonio, De Filippo, Carlotta
Published in Microbiome (22.02.2017)
Published in Microbiome (22.02.2017)
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Journal Article
Interactions between parasitic helminths and gut microbiota in wild tropical primates from intact and fragmented habitats
Barelli, Claudia, Donati, Claudio, Albanese, Davide, Pafčo, Barbora, Modrý, David, Rovero, Francesco, Hauffe, Heidi C.
Published in Scientific reports (03.11.2021)
Published in Scientific reports (03.11.2021)
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Journal Article
Microbiome of vineyard soils is shaped by geography and management
Coller, Emanuela, Cestaro, Alessandro, Zanzotti, Roberto, Bertoldi, Daniela, Pindo, Massimo, Larger, Simone, Albanese, Davide, Mescalchin, Enzo, Donati, Claudio
Published in Microbiome (08.11.2019)
Published in Microbiome (08.11.2019)
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Journal Article
Habitat fragmentation is associated to gut microbiota diversity of an endangered primate: implications for conservation
Barelli, Claudia, Albanese, Davide, Donati, Claudio, Pindo, Massimo, Dallago, Chiara, Rovero, Francesco, Cavalieri, Duccio, Tuohy, Kieran Michael, Hauffe, Heidi Christine, De Filippo, Carlotta
Published in Scientific reports (07.10.2015)
Published in Scientific reports (07.10.2015)
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Journal Article
Age and Gender Affect the Composition of Fungal Population of the Human Gastrointestinal Tract
Strati, Francesco, Di Paola, Monica, Stefanini, Irene, Albanese, Davide, Rizzetto, Lisa, Lionetti, Paolo, Calabrò, Antonio, Jousson, Olivier, Donati, Claudio, Cavalieri, Duccio, De Filippo, Carlotta
Published in Frontiers in microbiology (03.08.2016)
Published in Frontiers in microbiology (03.08.2016)
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Journal Article
The Gut Microbiota Communities of Wild Arboreal and Ground-Feeding Tropical Primates Are Affected Differently by Habitat Disturbance
Barelli, Claudia, Albanese, Davide, Stumpf, Rebecca M, Asangba, Abigail, Donati, Claudio, Rovero, Francesco, Hauffe, Heidi C
Published in mSystems (26.05.2020)
Published in mSystems (26.05.2020)
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Journal Article
Raw milk and fecal microbiota of commercial Alpine dairy cows varies with herd, fat content and diet
Albonico, Francesca, Barelli, Claudia, Albanese, Davide, Manica, Mattia, Partel, Erika, Rosso, Fausta, Ripellino, Silvia, Pindo, Massimo, Donati, Claudio, Zecconi, Alfonso, Mortarino, Michele, Hauffe, Heidi C
Published in PloS one (06.08.2020)
Published in PloS one (06.08.2020)
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Journal Article
Explaining diversity in metagenomic datasets by phylogenetic-based feature weighting
Albanese, Davide, De Filippo, Carlotta, Cavalieri, Duccio, Donati, Claudio
Published in PLoS computational biology (01.03.2015)
Published in PLoS computational biology (01.03.2015)
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Journal Article
Power Play of Commensal Bacteria in the Buccal Cavity of Female Nile Tilapia
Abdelhafiz, Yousri, Fernandes, Jorge M. O., Stefani, Erika, Albanese, Davide, Donati, Claudio, Kiron, Viswanath
Published in Frontiers in microbiology (16.11.2021)
Published in Frontiers in microbiology (16.11.2021)
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Journal Article
Alteration of Fecal Microbiota Profiles in Juvenile Idiopathic Arthritis. Associations with HLA-B27 Allele and Disease Status
Di Paola, Monica, Cavalieri, Duccio, Albanese, Davide, Sordo, Maddalena, Pindo, Massimo, Donati, Claudio, Pagnini, Ilaria, Giani, Teresa, Simonini, Gabriele, Paladini, Alessia, Lionetti, Paolo, De Filippo, Carlotta, Cimaz, Rolando
Published in Frontiers in microbiology (26.10.2016)
Published in Frontiers in microbiology (26.10.2016)
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Journal Article
Legal immigrants: invasion of alien microbial communities during winter occurring desert dust storms
Weil, Tobias, De Filippo, Carlotta, Albanese, Davide, Donati, Claudio, Pindo, Massimo, Pavarini, Lorenzo, Carotenuto, Federico, Pasqui, Massimiliano, Poto, Luisa, Gabrieli, Jacopo, Barbante, Carlo, Sattler, Birgit, Cavalieri, Duccio, Miglietta, Franco
Published in Microbiome (10.03.2017)
Published in Microbiome (10.03.2017)
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Journal Article
Breeding Strategy Shapes the Composition of Bacterial Communities in Female Nile Tilapia Reared in a Recirculating Aquaculture System
Abdelhafiz, Yousri, Fernandes, Jorge M O, Larger, Simone, Albanese, Davide, Donati, Claudio, Jafari, Omid, Nedoluzhko, Artem V, Kiron, Viswanath
Published in Frontiers in microbiology (10.09.2021)
Published in Frontiers in microbiology (10.09.2021)
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Journal Article
Pre-Cambrian roots of novel Antarctic cryptoendolithic bacterial lineages
Albanese, Davide, Coleine, Claudia, Rota-Stabelli, Omar, Onofri, Silvano, Tringe, Susannah G, Stajich, Jason E, Selbmann, Laura, Donati, Claudio
Published in Microbiome (19.03.2021)
Published in Microbiome (19.03.2021)
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Journal Article
Highly diverse and unknown viruses may enhance Antarctic endoliths' adaptability
Ettinger, Cassandra L, Saunders, Morgan, Selbmann, Laura, Delgado-Baquerizo, Manuel, Donati, Claudio, Albanese, Davide, Roux, Simon, Tringe, Susannah, Pennacchio, Christa, Del Rio, Tijana G, Stajich, Jason E, Coleine, Claudia
Published in Microbiome (08.05.2023)
Published in Microbiome (08.05.2023)
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Journal Article