In vitro co-cultures of human gut bacterial species as predicted from co-occurrence network analysis
Das, Promi, Ji, Boyang, Kovatcheva-Datchary, Petia, Bäckhed, Fredrik, Nielsen, Jens
Published in PloS one (30.03.2018)
Published in PloS one (30.03.2018)
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Journal Article
Effects of 'Healthy' Fecal Microbiota Transplantation against the Deterioration of Depression in Fawn-Hooded Rats
Hu, Bing, Das, Promi, Lv, Xianglin, Shi, Meng, Aa, Jiye, Wang, Kun, Duan, Liping, Gilbert, Jack A, Nie, Yong, Wu, Xiao-Lei
Published in mSystems (28.06.2022)
Published in mSystems (28.06.2022)
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Journal Article
Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy
Zhu, Qiyun, Huang, Shi, Gonzalez, Antonio, McGrath, Imran, McDonald, Daniel, Haiminen, Niina, Armstrong, George, Vázquez-Baeza, Yoshiki, Yu, Julian, Kuczynski, Justin, Sepich-Poore, Gregory D, Swafford, Austin D, Das, Promi, Shaffer, Justin P, Lejzerowicz, Franck, Belda-Ferre, Pedro, Havulinna, Aki S, Méric, Guillaume, Niiranen, Teemu, Lahti, Leo, Salomaa, Veikko, Kim, Ho-Cheol, Jain, Mohit, Inouye, Michael, Gilbert, Jack A, Knight, Rob
Published in mSystems (26.04.2022)
Published in mSystems (26.04.2022)
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Journal Article
Erratum for Hu et al., "Effects of 'Healthy' Fecal Microbiota Transplantation against the Deterioration of Depression in Fawn-Hooded Rats"
Hu, Bing, Das, Promi, Lv, Xianglin, Shi, Meng, Aa, Jiye, Wang, Kun, Duan, Liping, Gilbert, Jack A, Nie, Yong, Wu, Xiao-Lei
Published in mSystems (20.12.2022)
Published in mSystems (20.12.2022)
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Journal Article
Correction for Zhu et al., "Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy"
Zhu, Qiyun, Huang, Shi, Gonzalez, Antonio, McGrath, Imran, McDonald, Daniel, Haiminen, Niina, Armstrong, George, Vázquez-Baeza, Yoshiki, Yu, Julian, Kuczynski, Justin, Sepich-Poore, Gregory D, Swafford, Austin D, Das, Promi, Shaffer, Justin P, Lejzerowicz, Franck, Belda-Ferre, Pedro, Havulinna, Aki S, Méric, Guillaume, Niiranen, Teemu, Lahti, Leo, Salomaa, Veikko, Kim, Ho-Cheol, Jain, Mohit, Inouye, Michael, Gilbert, Jack A, Knight, Rob
Published in mSystems (19.11.2024)
Published in mSystems (19.11.2024)
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Journal Article
The Future of Microbiome-Based Therapeutics in Clinical Applications
Sharma, Anukriti, Das, Promi, Buschmann, Mary, Gilbert, Jack A
Published in Clinical pharmacology and therapeutics (01.01.2020)
Published in Clinical pharmacology and therapeutics (01.01.2020)
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Journal Article
Carbohydrate active enzymes are affected by diet transition from milk to solid food in infant gut microbiota
Ye, Lingqun, Das, Promi, Li, Peishun, Ji, Boyang, Nielsen, Jens
Published in FEMS microbiology ecology (01.11.2019)
Published in FEMS microbiology ecology (01.11.2019)
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Journal Article
Gut microbiota dysbiosis is associated with malnutrition and reduced plasma amino acid levels: Lessons from genome-scale metabolic modeling
Kumar, Manish, Ji, Boyang, Babaei, Parizad, Das, Promi, Lappa, Dimitra, Ramakrishnan, Girija, Fox, Todd E., Haque, Rashidul, Petri, William A., Bäckhed, Fredrik, Nielsen, Jens
Published in Metabolic engineering (01.09.2018)
Published in Metabolic engineering (01.09.2018)
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Journal Article
Commensal Oral Microbiota, Disease Severity, and Mortality in Fibrotic Lung Disease
O'Dwyer, David N, Kim, John S, Ma, Shwu-Fan, Ranjan, Piyush, Das, Promi, Lipinski, Jay H, Metcalf, Joseph D, Falkowski, Nicole R, Yow, Eric, Anstrom, Kevin, Dickson, Robert P, Huang, Yong, Gilbert, Jack A, Martinez, Fernando J, Noth, Imre
Published in American journal of respiratory and critical care medicine (01.05.2024)
Published in American journal of respiratory and critical care medicine (01.05.2024)
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Journal Article
Longitudinal urinary microbiome characteristics in women with urgency urinary incontinence undergoing sacral neuromodulation
Mueller, Margaret G., Das, Promi, Andy, Uduak, Brennaman, Lisa, Dieter, Alexis A., Dwarica, Denicia, Kirby, Anna C., Shepherd, Jonathan P., Gregory, W. Thomas, Amundsen, Cindy L.
Published in International Urogynecology Journal (01.02.2023)
Published in International Urogynecology Journal (01.02.2023)
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Journal Article
Characterization of the GU microbiome in women with self‐perceived bladder health over the life course
Mueller, Margaret G., Das, Promi, Andy, Uduak, Dieter, Alexis A., Dwarica, Denicia, Kirby, Anna C., Shepherd, Jonathan P., Gregory, W. Thomas, Amundsen, Cindy L., Kenton, Kimberly
Published in Neurourology and urodynamics (01.01.2023)
Published in Neurourology and urodynamics (01.01.2023)
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Journal Article
System biology approaches for systemic diseases: Emphasis on type II diabetes mellitus and allied metabolism
Das, Mohan, Chakraborty, Moumita, Das, Promi, Santra, Sayantan, Mukherjee, Abhishek, Das, Sarobi, Banyai, Krisztian, Roy, Souvik, Choudhury, Lopamudra, Gupta, Rudrak, Dey, Tama, Das, Dibya, Bose, Anirbandeep, Ganesh, Balasubramanian, Banerjee, Rintu
Published in Biocatalysis and agricultural biotechnology (01.06.2024)
Published in Biocatalysis and agricultural biotechnology (01.06.2024)
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Journal Article
SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment
Marotz, Clarisse, Belda-Ferre, Pedro, Ali, Farhana, Das, Promi, Huang, Shi, Cantrell, Kalen, Jiang, Lingjing, Martino, Cameron, Diner, Rachel E., Rahman, Gibraan, McDonald, Daniel, Armstrong, George, Kodera, Sho, Donato, Sonya, Ecklu-Mensah, Gertrude, Gottel, Neil, Salas Garcia, Mariana C., Chiang, Leslie Y., Salido, Rodolfo A., Shaffer, Justin P., Bryant, Mac Kenzie, Sanders, Karenina, Humphrey, Greg, Ackermann, Gail, Haiminen, Niina, Beck, Kristen L., Kim, Ho-Cheol, Carrieri, Anna Paola, Parida, Laxmi, Vázquez-Baeza, Yoshiki, Torriani, Francesca J., Knight, Rob, Gilbert, Jack, Sweeney, Daniel A., Allard, Sarah M.
Published in Microbiome (08.06.2021)
Published in Microbiome (08.06.2021)
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Journal Article
Characterization of SARS-CoV-2 Distribution and Microbial Succession in a Clinical Microbiology Testing Facility during the SARS-CoV-2 Pandemic
Sah, Govind Prasad, Kovalick, Grace, Chopyk, Jessica, Kuo, Peiting, Huang, Lina, Ghatbale, Pooja, Das, Promi, Realegeno, Susan, Knight, Rob, Gilbert, Jack A, Pride, David T
Published in Microbiology spectrum (14.03.2023)
Published in Microbiology spectrum (14.03.2023)
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Journal Article