Spatiotemporal single-cell RNA sequencing of developing chicken hearts identifies interplay between cellular differentiation and morphogenesis
Mantri, Madhav, Scuderi, Gaetano J., Abedini-Nassab, Roozbeh, Wang, Michael F. Z., McKellar, David, Shi, Hao, Grodner, Benjamin, Butcher, Jonathan T., De Vlaminck, Iwijn
Published in Nature communications (19.03.2021)
Published in Nature communications (19.03.2021)
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Journal Article
Temporal Response of the Human Virome to Immunosuppression and Antiviral Therapy
De Vlaminck, Iwijn, Khush, Kiran K., Strehl, Calvin, Kohli, Bitika, Luikart, Helen, Neff, Norma F., Okamoto, Jennifer, Snyder, Thomas M., Cornfield, David N., Nicolls, Mark R., Weill, David, Bernstein, Daniel, Valantine, Hannah A., Quake, Stephen R.
Published in Cell (21.11.2013)
Published in Cell (21.11.2013)
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Journal Article
Large-scale integration of single-cell transcriptomic data captures transitional progenitor states in mouse skeletal muscle regeneration
McKellar, David W., Walter, Lauren D., Song, Leo T., Mantri, Madhav, Wang, Michael F. Z., De Vlaminck, Iwijn, Cosgrove, Benjamin D.
Published in Communications biology (12.11.2021)
Published in Communications biology (12.11.2021)
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Journal Article
Uncovering transcriptional dark matter via gene annotation independent single-cell RNA sequencing analysis
Wang, Michael F. Z., Mantri, Madhav, Chou, Shao-Pei, Scuderi, Gaetano J., McKellar, David W., Butcher, Jonathan T., Danko, Charles G., De Vlaminck, Iwijn
Published in Nature communications (12.04.2021)
Published in Nature communications (12.04.2021)
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Journal Article
Mechanism of Homology Recognition in DNA Recombination from Dual-Molecule Experiments
De Vlaminck, Iwijn, van Loenhout, Marijn T.J., Zweifel, Ludovit, den Blanken, Johan, Hooning, Koen, Hage, Susanne, Kerssemakers, Jacob, Dekker, Cees
Published in Molecular cell (08.06.2012)
Published in Molecular cell (08.06.2012)
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Journal Article
Single-Cell-Genomics-Facilitated Read Binning of Candidate Phylum EM19 Genomes from Geothermal Spring Metagenomes
Becraft, Eric D, Dodsworth, Jeremy A, Murugapiran, Senthil K, Ohlsson, J Ingemar, Briggs, Brandon R, Kanbar, Jad, De Vlaminck, Iwijn, Quake, Stephen R, Dong, Hailiang, Hedlund, Brian P, Swingley, Wesley D
Published in Applied and environmental microbiology (15.02.2016)
Published in Applied and environmental microbiology (15.02.2016)
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Journal Article
Urinary cell-free DNA is a versatile analyte for monitoring infections of the urinary tract
Burnham, Philip, Dadhania, Darshana, Heyang, Michael, Chen, Fanny, Westblade, Lars F., Suthanthiran, Manikkam, Lee, John Richard, De Vlaminck, Iwijn
Published in Nature communications (20.06.2018)
Published in Nature communications (20.06.2018)
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Journal Article
Single-Cell Analysis of the Muscle Stem Cell Hierarchy Identifies Heterotypic Communication Signals Involved in Skeletal Muscle Regeneration
De Micheli, Andrea J., Laurilliard, Emily J., Heinke, Charles L., Ravichandran, Hiranmayi, Fraczek, Paula, Soueid-Baumgarten, Sharon, De Vlaminck, Iwijn, Elemento, Olivier, Cosgrove, Benjamin D.
Published in Cell reports (Cambridge) (10.03.2020)
Published in Cell reports (Cambridge) (10.03.2020)
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Journal Article
Development of a comprehensive noninvasive prenatal test
Malcher, Carolina, Yamamoto, Guilherme L, Burnham, Philip, Ezquina, Suzana A M, Lourenço, Naila C V, Balkassmi, Sahilla, Antonio, David S Marco, Hsia, Gabriella S P, Gollop, Thomaz, Pavanello, Rita C, Lopes, Marco Antonio, Bakker, Egbert, Zatz, Mayana, Bertola, Débora, Vlaminck, Iwijn De, Passos-Bueno, Maria Rita
Published in Genetics and molecular biology (01.07.2018)
Published in Genetics and molecular biology (01.07.2018)
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Journal Article
Gut uropathogen abundance is a risk factor for development of bacteriuria and urinary tract infection
Magruder, Matthew, Sholi, Adam N., Gong, Catherine, Zhang, Lisa, Edusei, Emmanuel, Huang, Jennifer, Albakry, Shady, Satlin, Michael J., Westblade, Lars F., Crawford, Carl, Dadhania, Darshana M., Lubetzky, Michelle, Taur, Ying, Littman, Eric, Ling, Lilan, Burnham, Philip, De Vlaminck, Iwijn, Pamer, Eric, Suthanthiran, Manikkam, Lee, John Richard
Published in Nature communications (04.12.2019)
Published in Nature communications (04.12.2019)
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Journal Article
Electrical detection of confined gap plasmons in metal-insulator-metal waveguides
Neutens, Pieter, Van Dorpe, Pol, De Vlaminck, Iwijn, Lagae, Liesbet, Borghs, Gustaaf
Published in Nature photonics (01.05.2009)
Published in Nature photonics (01.05.2009)
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Journal Article
Circulating cell-free DNA enables noninvasive diagnosis of heart transplant rejection
De Vlaminck, Iwijn, Valantine, Hannah A, Snyder, Thomas M, Strehl, Calvin, Cohen, Garrett, Luikart, Helen, Neff, Norma F, Okamoto, Jennifer, Bernstein, Daniel, Weisshaar, Dana, Quake, Stephen R, Khush, Kiran K
Published in Science translational medicine (18.06.2014)
Published in Science translational medicine (18.06.2014)
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Journal Article
Noninvasive monitoring of infection and rejection after lung transplantation
De Vlaminck, Iwijn, Martin, Lance, Kertesz, Michael, Patel, Kapil, Kowarsky, Mark, Strehl, Calvin, Cohen, Garrett, Luikart, Helen, Neff, Norma F., Okamoto, Jennifer, Nicolls, Mark R., Cornfield, David, Weill, David, Valantine, Hannah, Khush, Kiran K., Quake, Stephen R.
Published in Proceedings of the National Academy of Sciences - PNAS (27.10.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (27.10.2015)
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Journal Article
Single-stranded DNA library preparation uncovers the origin and diversity of ultrashort cell-free DNA in plasma
Burnham, Philip, Kim, Min Seong, Agbor-Enoh, Sean, Luikart, Helen, Valantine, Hannah A., Khush, Kiran K., De Vlaminck, Iwijn
Published in Scientific reports (14.06.2016)
Published in Scientific reports (14.06.2016)
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Journal Article
A quantitative comparison of single-cell whole genome amplification methods
de Bourcy, Charles F A, De Vlaminck, Iwijn, Kanbar, Jad N, Wang, Jianbin, Gawad, Charles, Quake, Stephen R
Published in PloS one (19.08.2014)
Published in PloS one (19.08.2014)
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Journal Article
Myriad Applications of Circulating Cell-Free DNA in Precision Organ Transplant Monitoring
Burnham, Philip, Khush, Kiran, De Vlaminck, Iwijn
Published in Annals of the American Thoracic Society (01.09.2017)
Published in Annals of the American Thoracic Society (01.09.2017)
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Journal Article
Molecular Approaches to Transplant Monitoring; Is the Horizon Here?
Agbor-Enoh, Sean, Oellerich, Michael, Wu, Angela, Halloran, Philip F, De Vlaminck, Iwijn, Keller, Michael
Published in Clinical chemistry (01.11.2021)
Published in Clinical chemistry (01.11.2021)
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