Genetic architecture of 11 organ traits derived from abdominal MRI using deep learning
Liu, Yi, Basty, Nicolas, Whitcher, Brandon, Bell, Jimmy D, Sorokin, Elena P, van Bruggen, Nick, Thomas, E Louise, Cule, Madeleine
Published in eLife (15.06.2021)
Published in eLife (15.06.2021)
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Journal Article
Estimating the Effect of Liver and Pancreas Volume and Fat Content on Risk of Diabetes: A Mendelian Randomization Study
Martin, Susan, Sorokin, Elena P, Thomas, E Louise, Sattar, Naveed, Cule, Madeleine, Bell, Jimmy D, Yaghootkar, Hanieh
Published in Diabetes care (01.02.2022)
Published in Diabetes care (01.02.2022)
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Journal Article
Diverse Sources of C. difficile Infection Identified on Whole-Genome Sequencing
Eyre, David W, Cule, Madeleine L, Wilson, Daniel J, Griffiths, David, Vaughan, Alison, O'Connor, Lily, Ip, Camilla L.C, Golubchik, Tanya, Batty, Elizabeth M, Finney, John M, Wyllie, David H, Didelot, Xavier, Piazza, Paolo, Bowden, Rory, Dingle, Kate E, Harding, Rosalind M, Crook, Derrick W, Wilcox, Mark H, Peto, Tim E.A, Walker, A. Sarah
Published in The New England journal of medicine (26.09.2013)
Published in The New England journal of medicine (26.09.2013)
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Journal Article
Precision MRI phenotyping enables detection of small changes in body composition for longitudinal cohorts
Whitcher, Brandon, Thanaj, Marjola, Cule, Madeleine, Liu, Yi, Basty, Nicolas, Sorokin, Elena P, Bell, Jimmy D, Thomas, E Louise
Published in Scientific reports (08.03.2022)
Published in Scientific reports (08.03.2022)
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Journal Article
Detection of mixed infection from bacterial whole genome sequence data allows assessment of its role in Clostridium difficile transmission
Eyre, David W, Cule, Madeleine L, Griffiths, David, Crook, Derrick W, Peto, Tim E A, Walker, A Sarah, Wilson, Daniel J
Published in PLoS computational biology (01.05.2013)
Published in PLoS computational biology (01.05.2013)
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Journal Article
Abdominal imaging associates body composition with COVID-19 severity
Basty, Nicolas, Sorokin, Elena P, Thanaj, Marjola, Srinivasan, Ramprakash, Whitcher, Brandon, Bell, Jimmy D, Cule, Madeleine, Thomas, E Louise
Published in PloS one (13.04.2023)
Published in PloS one (13.04.2023)
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Journal Article
Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
Young, Bernadette C, Golubchik, Tanya, Batty, Elizabeth M, Fung, Rowena, Larner-Svensson, Hanna, Votintseva, Antonina A, Miller, Ruth R, Godwin, Heather, Knox, Kyle, Everitt, Richard G, Iqbal, Zamin, Rimmer, Andrew J, Cule, Madeleine, Ip, Camilla L. C, Didelot, Xavier, Harding, Rosalind M, Donnelly, Peter, Peto, Tim E, Crook, Derrick W, Bowden, Rory, Wilson, Daniel J
Published in Proceedings of the National Academy of Sciences - PNAS (20.03.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (20.03.2012)
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Journal Article
Within-host evolution of Staphylococcus aureus during asymptomatic carriage
Golubchik, Tanya, Batty, Elizabeth M, Miller, Ruth R, Farr, Helen, Young, Bernadette C, Larner-Svensson, Hanna, Fung, Rowena, Godwin, Heather, Knox, Kyle, Votintseva, Antonina, Everitt, Richard G, Street, Teresa, Cule, Madeleine, Ip, Camilla L C, Didelot, Xavier, Peto, Timothy E A, Harding, Rosalind M, Wilson, Daniel J, Crook, Derrick W, Bowden, Rory
Published in PloS one (01.05.2013)
Published in PloS one (01.05.2013)
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Journal Article
Precision MRI phenotyping of muscle volume and quality at a population scale
Thanaj, Marjola, Basty, Nicolas, Whitcher, Brandon, Sorokin, Elena P, Liu, Yi, Srinivasan, Ramprakash, Cule, Madeleine, Thomas, E Louise, Bell, Jimmy D
Published in Frontiers in physiology (2024)
Published in Frontiers in physiology (2024)
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Journal Article
Calcification of the abdominal aorta is an under-appreciated cardiovascular disease risk factor in the general population
Sethi, Anurag, Taylor, D Leland, Ruby, J Graham, Venkataraman, Jagadish, Sorokin, Elena, Cule, Madeleine, Melamud, Eugene
Published in Frontiers in cardiovascular medicine (06.10.2022)
Published in Frontiers in cardiovascular medicine (06.10.2022)
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Journal Article
Kidney shape statistical analysis: associations with disease and anthropometric factors
Thanaj, Marjola, Basty, Nicolas, Cule, Madeleine, Sorokin, Elena P, Whitcher, Brandon, Srinivasan, Ramprakash, Lennon, Rachel, Bell, Jimmy D, Thomas, E Louise
Published in BMC nephrology (06.12.2023)
Published in BMC nephrology (06.12.2023)
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Journal Article
Liver shape analysis using statistical parametric maps at population scale
Thanaj, Marjola, Basty, Nicolas, Cule, Madeleine, Sorokin, Elena P, Whitcher, Brandon, Bell, Jimmy D, Thomas, E Louise
Published in BMC medical imaging (09.01.2024)
Published in BMC medical imaging (09.01.2024)
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Journal Article
A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samples
Batty, Elizabeth M, Wong, T H Nicholas, Trebes, Amy, Argoud, Karène, Attar, Moustafa, Buck, David, Ip, Camilla L C, Golubchik, Tanya, Cule, Madeleine, Bowden, Rory, Manganis, Charis, Klenerman, Paul, Barnes, Eleanor, Walker, A Sarah, Wyllie, David H, Wilson, Daniel J, Dingle, Kate E, Peto, Tim E A, Crook, Derrick W, Piazza, Paolo
Published in PloS one (10.06.2013)
Published in PloS one (10.06.2013)
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Journal Article
Artifact-free fat-water separation in Dixon MRI using deep learning
Basty, Nicolas, Thanaj, Marjola, Cule, Madeleine, Sorokin, Elena P., Liu, Yi, Thomas, E. Louise, Bell, Jimmy D., Whitcher, Brandon
Published in Journal of big data (01.01.2023)
Published in Journal of big data (01.01.2023)
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Journal Article
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission
Didelot, Xavier, Eyre, David W, Cule, Madeleine, Ip, Camilla LC, Ansari, M Azim, Griffiths, David, Vaughan, Alison, O’Connor, Lily, Golubchik, Tanya, Batty, Elizabeth M, Piazza, Paolo, Wilson, Daniel J, Bowden, Rory, Donnelly, Peter J, Dingle, Kate E, Wilcox, Mark, Walker, A Sarah, Crook, Derrick W, A Peto, Tim E, Harding, Rosalind M
Published in Genome biology (01.01.2012)
Published in Genome biology (01.01.2012)
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Journal Article
Towards eliminating bias in cluster analysis of TB genotyped data
van Schalkwyk, Cari, Cule, Madeleine, Welte, Alex, van Helden, Paul, van der Spuy, Gian, Uys, Pieter
Published in PloS one (29.03.2012)
Published in PloS one (29.03.2012)
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Journal Article
Hospital and community transmission of Clostridium difficile : a whole genome sequencing study
Eyre, David W, Dr, Cule, Madeleine L, PhD, Walker, A Sarah, PhD, Crook, Derrick W, Prof, Wilcox, Mark H, Prof, Peto, Tim E A, Prof
Published in The Lancet (British edition) (2012)
Published in The Lancet (British edition) (2012)
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