Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple
Chagné, David, Crowhurst, Ross N, Troggio, Michela, Davey, Mark W, Gilmore, Barbara, Lawley, Cindy, Vanderzande, Stijn, Hellens, Roger P, Kumar, Satish, Cestaro, Alessandro, Velasco, Riccardo, Main, Dorrie, Rees, Jasper D, Iezzoni, Amy, Mockler, Todd, Wilhelm, Larry, Van de Weg, Eric, Gardiner, Susan E, Bassil, Nahla, Peace, Cameron, Bendahmane, Mohammed
Published in PloS one (21.02.2012)
Published in PloS one (21.02.2012)
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Journal Article
De novo transcriptome sequence assembly and analysis of RNA silencing genes of Nicotiana benthamiana
Nakasugi, Kenlee, Crowhurst, Ross N, Bally, Julia, Wood, Craig C, Hellens, Roger P, Waterhouse, Peter M
Published in PloS one (28.03.2013)
Published in PloS one (28.03.2013)
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Journal Article
The draft genome sequence of European pear (Pyrus communis L. 'Bartlett')
Chagné, David, Crowhurst, Ross N, Pindo, Massimo, Thrimawithana, Amali, Deng, Cecilia, Ireland, Hilary, Fiers, Mark, Dzierzon, Helge, Cestaro, Alessandro, Fontana, Paolo, Bianco, Luca, Lu, Ashley, Storey, Roy, Knäbel, Mareike, Saeed, Munazza, Montanari, Sara, Kim, Yoon Kyeong, Nicolini, Daniela, Larger, Simone, Stefani, Erika, Allan, Andrew C, Bowen, Judith, Harvey, Isaac, Johnston, Jason, Malnoy, Mickael, Troggio, Michela, Perchepied, Laure, Sawyer, Greg, Wiedow, Claudia, Won, Kyungho, Viola, Roberto, Hellens, Roger P, Brewer, Lester, Bus, Vincent G M, Schaffer, Robert J, Gardiner, Susan E, Velasco, Riccardo
Published in PloS one (03.04.2014)
Published in PloS one (03.04.2014)
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Journal Article
An Ancient Duplication of Apple MYB Transcription Factors Is Responsible for Novel Red Fruit-Flesh Phenotypes
Chagné, David, Lin-Wang, Kui, Espley, Richard V., Volz, Richard K., How, Natalie M., Rouse, Simon, Brendolise, Cyril, Carlisle, Charmaine M., Kumar, Satish, De Silva, Nihal, Micheletti, Diego, McGhie, Tony, Crowhurst, Ross N., Storey, Roy D., Velasco, Riccardo, Hellens, Roger P., Gardiner, Susan E., Allan, Andrew C.
Published in Plant physiology (Bethesda) (01.01.2013)
Published in Plant physiology (Bethesda) (01.01.2013)
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Journal Article
Advanced engineering of lipid metabolism in Nicotiana benthamiana using a draft genome and the V2 viral silencing-suppressor protein
Naim, Fatima, Nakasugi, Kenlee, Crowhurst, Ross N, Hilario, Elena, Zwart, Alexander B, Hellens, Roger P, Taylor, Jennifer M, Waterhouse, Peter M, Wood, Craig C
Published in PloS one (26.12.2012)
Published in PloS one (26.12.2012)
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Journal Article
The Onion ( Allium cepa L.) R2R3-MYB Gene MYB1 Regulates Anthocyanin Biosynthesis
Schwinn, Kathy E, Ngo, Hanh, Kenel, Fernand, Brummell, David A, Albert, Nick W, McCallum, John A, Pither-Joyce, Meeghan, Crowhurst, Ross N, Eady, Colin, Davies, Kevin M
Published in Frontiers in plant science (09.12.2016)
Published in Frontiers in plant science (09.12.2016)
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Journal Article
Assembling large genomes: analysis of the stick insect (Clitarchus hookeri) genome reveals a high repeat content and sex-biased genes associated with reproduction
Wu, Chen, Twort, Victoria G, Crowhurst, Ross N, Newcomb, Richard D, Buckley, Thomas R
Published in BMC genomics (16.11.2017)
Published in BMC genomics (16.11.2017)
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Journal Article
Identification of Pyrus single nucleotide polymorphisms (SNPs) and evaluation for genetic mapping in European pear and interspecific Pyrus hybrids
Montanari, Sara, Saeed, Munazza, Knäbel, Mareike, Kim, YoonKyeong, Troggio, Michela, Malnoy, Mickael, Velasco, Riccardo, Fontana, Paolo, Won, KyungHo, Durel, Charles-Eric, Perchepied, Laure, Schaffer, Robert, Wiedow, Claudia, Bus, Vincent, Brewer, Lester, Gardiner, Susan E, Crowhurst, Ross N, Chagné, David
Published in PloS one (14.10.2013)
Published in PloS one (14.10.2013)
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Journal Article
The Peripheral Olfactory Repertoire of the Lightbrown Apple Moth, Epiphyas postvittana
Corcoran, Jacob A, Jordan, Melissa D, Thrimawithana, Amali H, Crowhurst, Ross N, Newcomb, Richard D
Published in PloS one (27.05.2015)
Published in PloS one (27.05.2015)
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Journal Article
Global gene expression analysis of apple fruit development from the floral bud to ripe fruit
Janssen, Bart J, Thodey, Kate, Schaffer, Robert J, Alba, Rob, Balakrishnan, Lena, Bishop, Rebecca, Bowen, Judith H, Crowhurst, Ross N, Gleave, Andrew P, Ledger, Susan, McArtney, Steve, Pichler, Franz B, Snowden, Kimberley C, Ward, Shayna
Published in BMC plant biology (17.02.2008)
Published in BMC plant biology (17.02.2008)
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Journal Article
Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution
Wu, Chen, Jordan, Melissa D, Newcomb, Richard D, Gemmell, Neil J, Bank, Sarah, Meusemann, Karen, Dearden, Peter K, Duncan, Elizabeth J, Grosser, Sefanie, Rutherford, Kim, Gardner, Paul P, Crowhurst, Ross N, Steinwender, Bernd, Tooman, Leah K, Stevens, Mark I, Buckley, Thomas R
Published in BMC genomics (17.10.2017)
Published in BMC genomics (17.10.2017)
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Journal Article
A gene-rich linkage map in the dioecious species Actinidia chinensis (kiwifruit) reveals putative X/Y sex-determining chromosomes
Fraser, Lena G, Tsang, Gianna K, Datson, Paul M, De Silva, H Nihal, Harvey, Catherine F, Gill, Geoffrey P, Crowhurst, Ross N, McNeilage, Mark A
Published in BMC genomics (10.03.2009)
Published in BMC genomics (10.03.2009)
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Journal Article
Mapping a candidate gene (MdMYB10) for red flesh and foliage colour in apple
Chagné, David, Carlisle, Charmaine M, Blond, Céline, Volz, Richard K, Whitworth, Claire J, Oraguzie, Nnadozie C, Crowhurst, Ross N, Allan, Andrew C, Espley, Richard V, Hellens, Roger P, Gardiner, Susan E
Published in BMC genomics (03.07.2007)
Published in BMC genomics (03.07.2007)
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Journal Article
The genome of the domesticated apple ( Malus × domestica Borkh.)
Velasco, Riccardo, Zharkikh, Andrey, Affourtit, Jason, Dhingra, Amit, Cestaro, Alessandro, Kalyanaraman, Ananth, Fontana, Paolo, Bhatnagar, Satish K, Troggio, Michela, Pruss, Dmitry, Salvi, Silvio, Pindo, Massimo, Baldi, Paolo, Castelletti, Sara, Cavaiuolo, Marina, Coppola, Giuseppina, Costa, Fabrizio, Cova, Valentina, Dal Ri, Antonio, Goremykin, Vadim, Komjanc, Matteo, Longhi, Sara, Magnago, Pierluigi, Malacarne, Giulia, Malnoy, Mickael, Micheletti, Diego, Moretto, Marco, Perazzolli, Michele, Si-Ammour, Azeddine, Vezzulli, Silvia, Zini, Elena, Eldredge, Glenn, Fitzgerald, Lisa M, Gutin, Natalia, Lanchbury, Jerry, Macalma, Teresita, Mitchell, Jeff T, Reid, Julia, Wardell, Bryan, Kodira, Chinnappa, Chen, Zhoutao, Desany, Brian, Niazi, Faheem, Palmer, Melinda, Koepke, Tyson, Jiwan, Derick, Schaeffer, Scott, Krishnan, Vandhana, Wu, Changjun, Chu, Vu T, King, Stephen T, Vick, Jessica, Tao, Quanzhou, Mraz, Amy, Stormo, Aimee, Stormo, Keith, Bogden, Robert, Ederle, Davide, Stella, Alessandra, Vecchietti, Alberto, Kater, Martin M, Masiero, Simona, Lasserre, Pauline, Lespinasse, Yves, Allan, Andrew C, Bus, Vincent, Chagné, David, Crowhurst, Ross N, Gleave, Andrew P, Lavezzo, Enrico, Fawcett, Jeffrey A, Proost, Sebastian, Rouzé, Pierre, Sterck, Lieven, Toppo, Stefano, Lazzari, Barbara, Hellens, Roger P, Durel, Charles-Eric, Gutin, Alexander, Bumgarner, Roger E, Gardiner, Susan E, Skolnick, Mark, Egholm, Michael, Van de Peer, Yves, Salamini, Francesco, Viola, Roberto
Published in Nature genetics (01.10.2010)
Published in Nature genetics (01.10.2010)
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Journal Article
The genome of woodland strawberry ( Fragaria vesca )
Folta, Kevin M, Shulaev, Vladimir, Sargent, Daniel J, Crowhurst, Ross N, Mockler, Todd C, Folkerts, Otto, Delcher, Arthur L, Jaiswal, Pankaj, Mockaitis, Keithanne, Liston, Aaron, Mane, Shrinivasrao P, Burns, Paul, Davis, Thomas M, Slovin, Janet P, Bassil, Nahla, Hellens, Roger P, Evans, Clive, Harkins, Tim, Kodira, Chinnappa, Desany, Brian, Crasta, Oswald R, Jensen, Roderick V, Allan, Andrew C, Michael, Todd P, Setubal, Joao Carlos, Celton, Jean-Marc, Rees, D Jasper G, Williams, Kelly P, Holt, Sarah H, Rojas, Juan Jairo Ruiz, Chatterjee, Mithu, Liu, Bo, Silva, Herman, Meisel, Lee, Adato, Avital, Filichkin, Sergei A, Troggio, Michela, Viola, Roberto, Ashman, Tia-Lynn, Wang, Hao, Dharmawardhana, Palitha, Elser, Justin, Raja, Rajani, Priest, Henry D, Bryant, Douglas W, Fox, Samuel E, Givan, Scott A, Wilhelm, Larry J, Naithani, Sushma, Christoffels, Alan, Salama, David Y, Carter, Jade, Girona, Elena Lopez, Zdepski, Anna, Wang, Wenqin, Kerstetter, Randall A, Schwab, Wilfried, Korban, Schuyler S, Davik, Jahn, Monfort, Amparo, Denoyes-Rothan, Beatrice, Arus, Pere, Mittler, Ron, Flinn, Barry, Aharoni, Asaph, Bennetzen, Jeffrey L, Salzberg, Steven L, Dickerman, Allan W, Velasco, Riccardo, Borodovsky, Mark, Veilleux, Richard E
Published in Nature genetics (01.02.2011)
Published in Nature genetics (01.02.2011)
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Journal Article
Genomics Approach Reveals That Aroma Production in Apple Is Controlled by Ethylene Predominantly at the Final Step in Each Biosynthetic Pathway
Schaffer, Robert J, Friel, Ellen N, Souleyre, Edwige J.F, Bolitho, Karen, Thodey, Kate, Ledger, Susan, Bowen, Judith H, Ma, Jun-Hong, Nain, Bhawana, Cohen, Daniel, Gleave, Andrew P, Crowhurst, Ross N, Janssen, Bart J, Yao, Jia-Long, Newcomb, Richard D
Published in Plant physiology (Bethesda) (01.08.2007)
Published in Plant physiology (Bethesda) (01.08.2007)
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Journal Article
The extremophile Nicotiana benthamiana has traded viral defence for early vigour
Bally, Julia, Nakasugi, Kenlee, Jia, Fangzhi, Jung, Hyungtaek, Ho, Simon Y W, Wong, Mei, Paul, Chloe M, Naim, Fatima, Wood, Craig C, Crowhurst, Ross N, Hellens, Roger P, Dale, James L, Waterhouse, Peter M
Published in Nature plants (02.11.2015)
Published in Nature plants (02.11.2015)
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Journal Article
Construction of a high density genetic map for hexaploid kiwifruit (Actinidia chinensis var. deliciosa) using genotyping by sequencing
Popowski, Elizabeth, Thomson, Susan J, Knäbel, Mareika, Tahir, Jibran, Crowhurst, Ross N, Davy, Marcus, Foster, Toshi M, Schaffer, Robert J, Tustin, D Stuart, Allan, Andrew C, McCallum, John, Chagné, David
Published in G3 : genes - genomes - genetics (01.07.2021)
Published in G3 : genes - genomes - genetics (01.07.2021)
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