Molecular approaches to determine the multiplicity of Plasmodium infections
Zhong, Daibin, Koepfli, Cristian, Cui, Liwang, Yan, Guiyun
Published in Malaria journal (23.04.2018)
Published in Malaria journal (23.04.2018)
Get full text
Journal Article
The lead-up to epidemic transmission: malaria trends and control interventions in Burundi 2000 to 2019
Sinzinkayo, Denis, Baza, Dismas, Gnanguenon, Virgile, Koepfli, Cristian
Published in Malaria journal (02.07.2021)
Published in Malaria journal (02.07.2021)
Get full text
Journal Article
Malaria epidemiology and interventions in Ethiopia from 2001 to 2016
Taffese, Hiwot S, Hemming-Schroeder, Elizabeth, Koepfli, Cristian, Tesfaye, Gezahegn, Lee, Ming-Chieh, Kazura, James, Yan, Gui-Yun, Zhou, Guo-Fa
Published in Infectious diseases of poverty (05.11.2018)
Published in Infectious diseases of poverty (05.11.2018)
Get full text
Journal Article
Development of amplicon deep sequencing markers and data analysis pipeline for genotyping multi-clonal malaria infections
Lerch, Anita, Koepfli, Cristian, Hofmann, Natalie E, Messerli, Camilla, Wilcox, Stephen, Kattenberg, Johanna H, Betuela, Inoni, O'Connor, Liam, Mueller, Ivo, Felger, Ingrid
Published in BMC genomics (13.11.2017)
Published in BMC genomics (13.11.2017)
Get full text
Journal Article
Sensitive and accurate quantification of human malaria parasites using droplet digital PCR (ddPCR)
Koepfli, Cristian, Nguitragool, Wang, Hofmann, Natalie E, Robinson, Leanne J, Ome-Kaius, Maria, Sattabongkot, Jetsumon, Felger, Ingrid, Mueller, Ivo
Published in Scientific reports (16.12.2016)
Published in Scientific reports (16.12.2016)
Get full text
Journal Article
Plasmodium falciparum and Plasmodium vivax Adjust Investment in Transmission in Response to Change in Transmission Intensity: A Review of the Current State of Research
Oduma, Colins O, Koepfli, Cristian
Published in Frontiers in cellular and infection microbiology (08.12.2021)
Published in Frontiers in cellular and infection microbiology (08.12.2021)
Get full text
Journal Article
Longitudinal tracking and quantification of individual Plasmodium falciparum clones in complex infections
Lerch, Anita, Koepfli, Cristian, Hofmann, Natalie E, Kattenberg, Johanna H, Rosanas-Urgell, Anna, Betuela, Inoni, Mueller, Ivo, Felger, Ingrid
Published in Scientific reports (04.03.2019)
Published in Scientific reports (04.03.2019)
Get full text
Journal Article
Challenges in diagnosis of clinical and subclinical Plasmodium falciparum infections in Ghana and feasibility of reactive interventions to shrink the subclinical reservoir
Reynders, Madeline, Tweneboah, Austine, Abbas, Dawood Ackom, Opoku Afriyie, Stephen, Nketsiah, Stephen Nelly, Badu, Kingsley, Koepfli, Cristian
Published in Malaria journal (10.09.2024)
Published in Malaria journal (10.09.2024)
Get full text
Journal Article
Investigating differences in village-level heterogeneity of malaria infection and household risk factors in Papua New Guinea
Gul, Desmond, Rodríguez-Rodríguez, Daniela, Nate, Elma, Auwan, Alma, Salib, Mary, Lorry, Lina, Keven, John B., Katusele, Michelle, Rosado, Jason, Hofmann, Natalie, Ome-Kaius, Maria, Koepfli, Cristian, Felger, Ingrid, Kazura, James W., Hetzel, Manuel W., Mueller, Ivo, Karl, Stephan, Clements, Archie C. A., Fowkes, Freya J. I., Laman, Moses, Robinson, Leanne J.
Published in Scientific reports (16.08.2021)
Published in Scientific reports (16.08.2021)
Get full text
Journal Article
High-throughput Plasmodium falciparum hrp2 and hrp3 gene deletion typing by digital PCR to monitor malaria rapid diagnostic test efficacy
Vera-Arias, Claudia A, Holzschuh, Aurel, Oduma, Colins O, Badu, Kingsley, Abdul-Hakim, Mutala, Yukich, Joshua, Hetzel, Manuel W, Fakih, Bakar S, Ali, Abdullah, Ferreira, Marcelo U, Ladeia-Andrade, Simone, Sáenz, Fabián E, Afrane, Yaw, Zemene, Endalew, Yewhalaw, Delenasaw, Kazura, James W, Yan, Guiyun, Koepfli, Cristian
Published in eLife (28.06.2022)
Published in eLife (28.06.2022)
Get full text
Journal Article
Amplicon deep sequencing of five highly polymorphic markers of Plasmodium falciparum reveals high parasite genetic diversity and moderate population structure in Ethiopia
Reda, Abeba Gebretsadik, Huwe, Tiffany, Koepfli, Cristian, Assefa, Ashenafi, Tessema, Sofonias Kifle, Messele, Alebachew, Golassa, Lemu, Mamo, Hassen
Published in Malaria journal (12.12.2023)
Published in Malaria journal (12.12.2023)
Get full text
Journal Article
High prevalence of asymptomatic and subpatent Plasmodium falciparum infections but no histidine-rich protein 2 gene deletion in Bouaké, Côte d’Ivoire
Sagna, André Barembaye, Gebre, Yilekal, Vera-Arias, Claudia Abigail, Traoré, Dipomin François, Tchekoi, Bertin N’cho, Assi, Serge Brice, Koffi, Amnan Alphonsine, Rogier, Christophe, Remoue, Franck, Koepfli, Cristian
Published in Scientific reports (17.08.2024)
Published in Scientific reports (17.08.2024)
Get full text
Journal Article
Burden of malaria, impact of interventions and climate variability in Western Ethiopia: an area with large irrigation based farming
Haileselassie, Werissaw, Parker, Daniel M, Taye, Behailu, David, Randy E, Zemene, Endalew, Lee, Ming-Chieh, Zhong, Daibin, Zhou, Guofa, Alemu, Tesfahun, Tadele, Getnet, Kazura, James W, Koepfli, Cristian, Deressa, Wakgari, Yewhalaw, Delenasaw, Yan, Guiyun
Published in BMC public health (29.01.2022)
Published in BMC public health (29.01.2022)
Get full text
Journal Article
Accuracy of diagnosis among clinical malaria patients: comparing microscopy, RDT and a highly sensitive quantitative PCR looking at the implications for submicroscopic infections
Opoku Afriyie, Stephen, Addison, Thomas Kwame, Gebre, Yilekal, Mutala, Abdul-Hakim, Antwi, Kwasi Baako, Abbas, Dawood Ackom, Addo, Kofi Agyapong, Tweneboah, Austine, Ayisi-Boateng, Nana Kwame, Koepfli, Cristian, Badu, Kingsley
Published in Malaria journal (04.03.2023)
Published in Malaria journal (04.03.2023)
Get full text
Journal Article
Substantial population structure of Plasmodium vivax in Thailand facilitates identification of the sources of residual transmission
Kittichai, Veerayuth, Koepfli, Cristian, Nguitragool, Wang, Sattabongkot, Jetsumon, Cui, Liwang
Published in PLoS neglected tropical diseases (16.10.2017)
Published in PLoS neglected tropical diseases (16.10.2017)
Get full text
Journal Article
Multiplexed ddPCR-amplicon sequencing reveals isolated Plasmodium falciparum populations amenable to local elimination in Zanzibar, Tanzania
Holzschuh, Aurel, Lerch, Anita, Gerlovina, Inna, Fakih, Bakar S, Al-Mafazy, Abdul-Wahid H, Reaves, Erik J, Ali, Abdullah, Abbas, Faiza, Ali, Mohamed Haji, Ali, Mohamed Ali, Hetzel, Manuel W, Yukich, Joshua, Koepfli, Cristian
Published in Nature communications (22.06.2023)
Published in Nature communications (22.06.2023)
Get full text
Journal Article
Comparison of three rapid diagnostic tests for Plasmodium falciparum diagnosis in Ghana
Kayode, Tolulope Adeyemi, Addo, Agyapong Kofi, Addison, Thomas Kwame, Tweneboah, Austine, Afriyie, Stephen Opoku, Abbas, Dawood Ackom, Seth, Ayesha, Badu-Tawiah, Abraham K, Badu, Kingsley, Koepfli, Cristian
Published in Malaria journal (30.08.2024)
Published in Malaria journal (30.08.2024)
Get full text
Journal Article