Sequencing and assembly of the 22-gb loblolly pine genome
Zimin, Aleksey, Stevens, Kristian A, Crepeau, Marc W, Holtz-Morris, Ann, Koriabine, Maxim, Marçais, Guillaume, Puiu, Daniela, Roberts, Michael, Wegrzyn, Jill L, de Jong, Pieter J, Neale, David B, Salzberg, Steven L, Yorke, James A, Langley, Charles H
Published in Genetics (Austin) (01.03.2014)
Published in Genetics (Austin) (01.03.2014)
Get full text
Journal Article
Population Genomics of sub-saharan Drosophila melanogaster: African diversity and non-African admixture
Pool, John E, Corbett-Detig, Russell B, Sugino, Ryuichi P, Stevens, Kristian A, Cardeno, Charis M, Crepeau, Marc W, Duchen, Pablo, Emerson, J J, Saelao, Perot, Begun, David J, Langley, Charles H
Published in PLoS genetics (01.12.2012)
Published in PLoS genetics (01.12.2012)
Get full text
Journal Article
Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation
Wegrzyn, Jill L, Liechty, John D, Stevens, Kristian A, Wu, Le-Shin, Loopstra, Carol A, Vasquez-Gross, Hans A, Dougherty, William M, Lin, Brian Y, Zieve, Jacob J, Martínez-García, Pedro J, Holt, Carson, Yandell, Mark, Zimin, Aleksey V, Yorke, James A, Crepeau, Marc W, Puiu, Daniela, Salzberg, Steven L, Dejong, Pieter J, Mockaitis, Keithanne, Main, Doreen, Langley, Charles H, Neale, David B
Published in Genetics (Austin) (01.03.2014)
Published in Genetics (Austin) (01.03.2014)
Get full text
Journal Article
The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non‐structural polyphenols
Martínez‐García, Pedro J., Crepeau, Marc W., Puiu, Daniela, Gonzalez‐Ibeas, Daniel, Whalen, Jeanne, Stevens, Kristian A., Paul, Robin, Butterfield, Timothy S., Britton, Monica T., Reagan, Russell L., Chakraborty, Sandeep, Walawage, Sriema L., Vasquez‐Gross, Hans A., Cardeno, Charis, Famula, Randi A., Pratt, Kevin, Kuruganti, Sowmya, Aradhya, Mallikarjuna K., Leslie, Charles A., Dandekar, Abhaya M., Salzberg, Steven L., Wegrzyn, Jill L., Langley, Charles H., Neale, David B.
Published in The Plant journal : for cell and molecular biology (01.09.2016)
Published in The Plant journal : for cell and molecular biology (01.09.2016)
Get full text
Journal Article
The Drosophila genome nexus: a population genomic resource of 623 Drosophila melanogaster genomes, including 197 from a single ancestral range population
Lack, Justin B, Cardeno, Charis M, Crepeau, Marc W, Taylor, William, Corbett-Detig, Russell B, Stevens, Kristian A, Langley, Charles H, Pool, John E
Published in Genetics (Austin) (01.04.2015)
Published in Genetics (Austin) (01.04.2015)
Get full text
Journal Article
A new genomic tool for walnut (Juglans regia L.): development and validation of the high‐density Axiom™ J. regia 700K SNP genotyping array
Marrano, Annarita, Martínez‐García, Pedro J., Bianco, Luca, Sideli, Gina M., Di Pierro, Erica A., Leslie, Charles A., Stevens, Kristian A., Crepeau, Marc W., Troggio, Michela, Langley, Charles H., Neale, David B.
Published in Plant biotechnology journal (01.06.2019)
Published in Plant biotechnology journal (01.06.2019)
Get full text
Journal Article
An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing
Zimin, Aleksey V., Stevens, Kristian A., Crepeau, Marc W., Puiu, Daniela, Wegrzyn, Jill L., Yorke, James A., Langley, Charles H., Neale, David B., Salzberg, Steven L.
Published in Gigascience (01.01.2017)
Published in Gigascience (01.01.2017)
Get full text
Journal Article
Genomic signatures of local adaptation in recent invasive Aedes aegypti populations in California
Soudi, Shaghayegh, Crepeau, Marc, Collier, Travis C, Lee, Yoosook, Cornel, Anthony J, Lanzaro, Gregory C
Published in BMC genomics (10.06.2023)
Published in BMC genomics (10.06.2023)
Get full text
Journal Article
Anopheles gambiae on remote islands in the Indian Ocean: origins and prospects for malaria elimination by genetic modification of extant populations
Ditter, Robert E, Campos, Melina, Crepeau, Marc W, Pinto, João, Toilibou, Ali, Amina, Yssouf, Tantely, Luciano Michaël, Girod, Romain, Lee, Yoosook, Cornel, Anthony J, Lanzaro, Gregory C
Published in Scientific reports (27.11.2023)
Published in Scientific reports (27.11.2023)
Get full text
Journal Article
Genomic architecture of complex traits in loblolly pine
De La Torre, Amanda R., Puiu, Daniela, Crepeau, Marc W., Stevens, Kristian, Salzberg, Steven L., Langley, Charles H., Neale, David B.
Published in The New phytologist (01.03.2019)
Published in The New phytologist (01.03.2019)
Get full text
Journal Article
Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization
Montanari, Sara, Bianco, Luca, Allen, Brian J, Martínez-García, Pedro J, Bassil, Nahla V, Postman, Joseph, Knäbel, Mareike, Kitson, Biff, Deng, Cecilia H, Chagné, David, Crepeau, Marc W, Langley, Charles H, Evans, Kate, Dhingra, Amit, Troggio, Michela, Neale, David B
Published in BMC genomics (02.05.2019)
Published in BMC genomics (02.05.2019)
Get full text
Journal Article
Sequence of the Sugar Pine Megagenome
Stevens, Kristian A, Wegrzyn, Jill L, Zimin, Aleksey, Puiu, Daniela, Crepeau, Marc, Cardeno, Charis, Paul, Robin, Gonzalez-Ibeas, Daniel, Koriabine, Maxim, Holtz-Morris, Ann E, Martínez-García, Pedro J, Sezen, Uzay U, Marçais, Guillaume, Jermstad, Kathy, McGuire, Patrick E, Loopstra, Carol A, Davis, John M, Eckert, Andrew, de Jong, Pieter, Yorke, James A, Salzberg, Steven L, Neale, David B, Langley, Charles H
Published in Genetics (Austin) (01.12.2016)
Published in Genetics (Austin) (01.12.2016)
Get full text
Journal Article
Genomic basis of white pine blister rust quantitative disease resistance and its relationship with qualitative resistance
Weiss, Matthew, Sniezko, Richard A., Puiu, Daniela, Crepeau, Marc W., Stevens, Kristian, Salzberg, Steven L., Langley, Charles H., Neale, David B., De La Torre, Amanda R.
Published in The Plant journal : for cell and molecular biology (01.10.2020)
Published in The Plant journal : for cell and molecular biology (01.10.2020)
Get full text
Journal Article
The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae
Neale, David B, McGuire, Patrick E, Wheeler, Nicholas C, Stevens, Kristian A, Crepeau, Marc W, Cardeno, Charis, Zimin, Aleksey V, Puiu, Daniela, Pertea, Geo M, Sezen, U Uzay, Casola, Claudio, Koralewski, Tomasz E, Paul, Robin, Gonzalez-Ibeas, Daniel, Zaman, Sumaira, Cronn, Richard, Yandell, Mark, Holt, Carson, Langley, Charles H, Yorke, James A, Salzberg, Steven L, Wegrzyn, Jill L
Published in G3 : genes - genomes - genetics (01.09.2017)
Published in G3 : genes - genomes - genetics (01.09.2017)
Get full text
Journal Article
Genomic Variation Among and Within Six Juglans Species
Stevens, Kristian A, Woeste, Keith, Chakraborty, Sandeep, Crepeau, Marc W, Leslie, Charles A, Martínez-García, Pedro J, Puiu, Daniela, Romero-Severson, Jeanne, Coggeshall, Mark, Dandekar, Abhaya M, Kluepfel, Daniel, Neale, David B, Salzberg, Steven L, Langley, Charles H
Published in G3 : genes - genomes - genetics (01.07.2018)
Published in G3 : genes - genomes - genetics (01.07.2018)
Get full text
Journal Article
First Draft Assembly and Annotation of the Genome of a California Endemic Oak Quercus lobata Née (Fagaceae)
Sork, Victoria L, Fitz-Gibbon, Sorel T, Puiu, Daniela, Crepeau, Marc, Gugger, Paul F, Sherman, Rachel, Stevens, Kristian, Langley, Charles H, Pellegrini, Matteo, Salzberg, Steven L
Published in G3 : genes - genomes - genetics (01.11.2016)
Published in G3 : genes - genomes - genetics (01.11.2016)
Get full text
Journal Article
Spontaneous mutation rate estimates for the principal malaria vectors Anopheles coluzzii and Anopheles stephensi
Rashid, Iliyas, Campos, Melina, Collier, Travis, Crepeau, Marc, Weakley, Allison, Gripkey, Hans, Lee, Yoosook, Schmidt, Hanno, Lanzaro, Gregory C
Published in Scientific reports (07.01.2022)
Published in Scientific reports (07.01.2022)
Get full text
Journal Article
Dissecting the Polygenic Basis of Cold Adaptation Using Genome-Wide Association of Traits and Environmental Data in Douglas-fir
De La Torre, Amanda R, Wilhite, Benjamin, Puiu, Daniela, St Clair, John Bradley, Crepeau, Marc W, Salzberg, Steven L, Langley, Charles H, Allen, Brian, Neale, David B
Published in Genes (18.01.2021)
Published in Genes (18.01.2021)
Get full text
Journal Article
From Pine Cones to Read Clouds: Rescaffolding the Megagenome of Sugar Pine ( Pinus lambertiana )
Crepeau, Marc W, Langley, Charles H, Stevens, Kristian A
Published in G3 : genes - genomes - genetics (01.05.2017)
Published in G3 : genes - genomes - genetics (01.05.2017)
Get full text
Journal Article
Population Genetics of Anopheles pretoriensis in Grande Comore Island
Campos, Melina, Patel, Nikita, Marshall, Carly, Gripkey, Hans, Ditter, Robert E, Crepeau, Marc W, Toilibou, Ali, Amina, Yssouf, Cornel, Anthony J, Lee, Yoosook, Lanzaro, Gregory C
Published in Insects (Basel, Switzerland) (23.12.2022)
Published in Insects (Basel, Switzerland) (23.12.2022)
Get full text
Journal Article