Evolution via recombination: Cell-to-cell contact facilitates larger recombination events in Streptococcus pneumoniae
Cowley, Lauren A, Petersen, Fernanda C, Junges, Roger, Jimson D Jimenez, Med, Morrison, Donald A, Hanage, William P
Published in PLoS genetics (13.06.2018)
Published in PLoS genetics (13.06.2018)
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Journal Article
The acquisition of clinically relevant amoxicillin resistance in Streptococcus pneumoniae requires ordered horizontal gene transfer of four loci
Gibson, Paddy S, Bexkens, Evan, Zuber, Sylvia, Cowley, Lauren A, Veening, Jan-Willem
Published in PLoS pathogens (01.07.2022)
Published in PLoS pathogens (01.07.2022)
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Journal Article
Whole-Genome Sequencing for National Surveillance of Shiga Toxin–Producing Escherichia coli O157
Dallman, Timothy J., Byrne, Lisa, Ashton, Philip M., Cowley, Lauren A., Perry, Neil T., Adak, Goutam, Petrovska, Liljana, Ellis, Richard J., Elson, Richard, Underwood, Anthony, Green, Jonathan, Hanage, William P., Jenkins, Claire, Grant, Kathie, Wain, John
Published in Clinical infectious diseases (01.08.2015)
Published in Clinical infectious diseases (01.08.2015)
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Journal Article
The evolution and international spread of extensively drug resistant Shigella sonnei
Mason, Lewis C. E., Greig, David R., Cowley, Lauren A., Partridge, Sally R., Martinez, Elena, Blackwell, Grace A., Chong, Charlotte E., De Silva, P. Malaka, Bengtsson, Rebecca J., Draper, Jenny L., Ginn, Andrew N., Sandaradura, Indy, Sim, Eby M., Iredell, Jonathan R., Sintchenko, Vitali, Ingle, Danielle J., Howden, Benjamin P., Lefèvre, Sophie, Njamkepo, Elisabeth, Weill, François-Xavier, Ceyssens, Pieter-Jan, Jenkins, Claire, Baker, Kate S.
Published in Nature communications (08.04.2023)
Published in Nature communications (08.04.2023)
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Journal Article
ESBL-Producing and Macrolide-Resistant Shigella sonnei Infections among Men Who Have Sex with Men, England, 2015
Mook, Piers, McCormick, Jacquelyn, Bains, Manpreet, Cowley, Lauren A, Chattaway, Marie A, Jenkins, Claire, Mikhail, Amy, Hughes, Gwenda, Elson, Richard, Day, Martin, Manuel, Rohini, Dave, Jayshree, Field, Nigel, Godbole, Gauri, Dallman, Timothy, Crook, Paul
Published in Emerging infectious diseases (01.11.2016)
Published in Emerging infectious diseases (01.11.2016)
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Journal Article
An investigation of the diversity of strains of enteroaggregative Escherichia coli isolated from cases associated with a large multi-pathogen foodborne outbreak in the UK
Dallman, Timothy J, Chattaway, Marie A, Cowley, Lauren A, Doumith, Michel, Tewolde, Rediat, Wooldridge, David J, Underwood, Anthony, Ready, Derren, Wain, John, Foster, Kirsty, Grant, Kathie A, Jenkins, Claire
Published in PloS one (20.05.2014)
Published in PloS one (20.05.2014)
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Journal Article
Author Correction: The evolution and international spread of extensively drug resistant Shigella sonnei
Mason, Lewis C. E., Greig, David R., Cowley, Lauren A., Partridge, Sally R., Martinez, Elena, Blackwell, Grace A., Chong, Charlotte E., De Silva, P. Malaka, Bengtsson, Rebecca J., Draper, Jenny L., Ginn, Andrew N., Sandaradura, Indy, Sim, Eby M., Iredell, Jonathan R., Sintchenko, Vitali, Ingle, Danielle J., Howden, Benjamin P., Lefèvre, Sophie, Njamkepo, Elisabeth, Weill, François-Xavier, Ceyssens, Pieter-Jan, Jenkins, Claire, Baker, Kate S.
Published in Nature communications (21.04.2023)
Published in Nature communications (21.04.2023)
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Journal Article
Evolutionary Context of Non-Sorbitol-Fermenting Shiga Toxin-Producing Escherichia coli O55:H7
Schutz, Kyle, Cowley, Lauren A, Shaaban, Sharif, Carroll, Anne, McNamara, Eleanor, Gally, David L, Godbole, Gauri, Jenkins, Claire, Dallman, Timothy J
Published in Emerging infectious diseases (01.12.2017)
Published in Emerging infectious diseases (01.12.2017)
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Journal Article
Phylogenetic comparison of enteroinvasive Escherichia coli isolated from cases of diarrhoeal disease in England, 2005-2016
Cowley, Lauren A, Oresegun, Damilola R, Chattaway, Marie A, Dallman, Timothy J, Jenkins, Claire
Published in Journal of medical microbiology (01.06.2018)
Published in Journal of medical microbiology (01.06.2018)
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Journal Article
Acquisition and loss of CTX-M plasmids in Shigella species associated with MSM transmission in the UK
Locke, Rebecca K, Greig, David R, Jenkins, Claire, Dallman, Tim J, Cowley, Lauren A
Published in Microbial genomics (01.08.2021)
Published in Microbial genomics (01.08.2021)
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Journal Article
Analysis of whole genome sequencing for the Escherichia coli O157:H7 typing phages
Cowley, Lauren A, Beckett, Stephen J, Chase-Topping, Margo, Perry, Neil, Dallman, Tim J, Gally, David L, Jenkins, Claire
Published in BMC genomics (08.04.2015)
Published in BMC genomics (08.04.2015)
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Journal Article
Transposon Insertion Sequencing Elucidates Novel Gene Involvement in Susceptibility and Resistance to Phages T4 and T7 in Escherichia coli O157
Cowley, Lauren A, Low, Alison S, Pickard, Derek, Boinett, Christine J, Dallman, Timothy J, Day, Martin, Perry, Neil, Gally, David L, Parkhill, Julian, Jenkins, Claire, Cain, Amy K
Published in mBio (24.07.2018)
Published in mBio (24.07.2018)
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Journal Article
Exploring feasibility, perceptions of acceptability, and potential benefits of an 8-week yoga intervention delivered by videoconference for young adults affected by cancer: a single-arm hybrid effectiveness-implementation pilot study
Wurz, Amanda, McLaughlin, Emma, Hughes, Kimberly, Ellis, Kelsey, Chen, Amy, Cowley, Lauren, Molina, Heather, Duchek, Delaney, Eisele, Maximilian, Culos-Reed, S Nicole
Published in Pilot and feasibility studies (10.03.2023)
Published in Pilot and feasibility studies (10.03.2023)
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Journal Article
Evolution of a zoonotic pathogen: investigating prophage diversity in enterohaemorrhagic Escherichia coli O157 by long-read sequencing
Shaaban, Sharif, Cowley, Lauren A, McAteer, Sean P, Jenkins, Claire, Dallman, Timothy J, Bono, James L, Gally, David L
Published in Microbial genomics (01.12.2016)
Published in Microbial genomics (01.12.2016)
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Journal Article
Within-host Mycobacterium tuberculosis diversity and its utility for inferences of transmission
Martin, Michael A, Lee, Robyn S, Cowley, Lauren A, Gardy, Jennifer L, Hanage, William P
Published in Microbial genomics (01.10.2018)
Published in Microbial genomics (01.10.2018)
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Journal Article
Genomics, social media and mobile phone data enable mapping of SARS-CoV-2 lineages to inform health policy in Bangladesh
Cowley, Lauren A., Afrad, Mokibul Hassan, Rahman, Sadia Isfat Ara, Mamun, Md Mahfuz Al, Chin, Taylor, Mahmud, Ayesha, Rahman, Mohammed Ziaur, Billah, Mallick Masum, Khan, Manjur Hossain, Sultana, Sharmin, Khondaker, Tilovatul, Baker, Stephen, Banik, Nandita, Alam, Ahmed Nawsher, Mannoor, Kaiissar, Banu, Sayera, Chowdhury, Anir, Flora, Meerjady Sabrina, Thomson, Nicholas R., Buckee, Caroline O., Qadri, Firdausi, Shirin, Tahmina
Published in Nature microbiology (01.10.2021)
Published in Nature microbiology (01.10.2021)
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