Next-Generation Machine Learning for Biological Networks
Camacho, Diogo M., Collins, Katherine M., Powers, Rani K., Costello, James C., Collins, James J.
Published in Cell (14.06.2018)
Published in Cell (14.06.2018)
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Journal Article
Tumor-Derived Cell Lines as Molecular Models of Cancer Pharmacogenomics
Goodspeed, Andrew, Heiser, Laura M, Gray, Joe W, Costello, James C
Published in Molecular cancer research (01.01.2016)
Published in Molecular cancer research (01.01.2016)
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Journal Article
Bactericidal antibiotics induce mitochondrial dysfunction and oxidative damage in Mammalian cells
Kalghatgi, Sameer, Spina, Catherine S, Costello, James C, Liesa, Marc, Morones-Ramirez, J Ruben, Slomovic, Shimyn, Molina, Anthony, Shirihai, Orian S, Collins, James J
Published in Science translational medicine (03.07.2013)
Published in Science translational medicine (03.07.2013)
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Journal Article
Marine spatial planning makes room for offshore aquaculture in crowded coastal waters
Lester, S E, Stevens, J M, Gentry, R R, Kappel, C V, Bell, T W, Costello, C J, Gaines, S D, Kiefer, D A, Maue, C C, Rensel, J E, Simons, R D, Washburn, L, White, C
Published in Nature communications (05.03.2018)
Published in Nature communications (05.03.2018)
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Journal Article
Crowdsourcing biomedical research: leveraging communities as innovation engines
Saez-Rodriguez, Julio, Costello, James C, Friend, Stephen H, Kellen, Michael R, Mangravite, Lara, Meyer, Pablo, Norman, Thea, Stolovitzky, Gustavo
Published in Nature reviews. Genetics (01.08.2016)
Published in Nature reviews. Genetics (01.08.2016)
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Journal Article
Wisdom of crowds for robust gene network inference
Marbach, Daniel, Costello, James C, Küffner, Robert, Vega, Nicole M, Prill, Robert J, Camacho, Diogo M, Allison, Kyle R, Kellis, Manolis, Collins, James J, Stolovitzky, Gustavo
Published in Nature methods (15.07.2012)
Published in Nature methods (15.07.2012)
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Zinc as an anti-tumor agent in prostate cancer and in other cancers
Franklin, Renty B., Costello, Leslie C.
Published in Archives of biochemistry and biophysics (15.07.2007)
Published in Archives of biochemistry and biophysics (15.07.2007)
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Journal Article
Neutral endopeptidase inhibition and the natriuretic peptide system: an evolving strategy in cardiovascular therapeutics
Mangiafico, Sarah, Costello-Boerrigter, Lisa C, Andersen, Ingrid A, Cataliotti, Alessandro, Burnett, Jr, John C
Published in European heart journal (21.03.2013)
Published in European heart journal (21.03.2013)
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Journal Article
Trisomy 21 activates the kynurenine pathway via increased dosage of interferon receptors
Powers, Rani K, Culp-Hill, Rachel, Ludwig, Michael P, Smith, Keith P, Waugh, Katherine A, Minter, Ross, Tuttle, Kathryn D, Lewis, Hannah C, Rachubinski, Angela L, Granrath, Ross E, Carmona-Iragui, María, Wilkerson, Rebecca B, Kahn, Darcy E, Joshi, Molishree, Lleó, Alberto, Blesa, Rafael, Fortea, Juan, D'Alessandro, Angelo, Costello, James C, Sullivan, Kelly D, Espinosa, Joaquin M
Published in Nature communications (18.10.2019)
Published in Nature communications (18.10.2019)
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Journal Article
Molecular analysis of urothelial cancer cell lines for modeling tumor biology and drug response
Nickerson, M L, Witte, N, Im, K M, Turan, S, Owens, C, Misner, K, Tsang, S X, Cai, Z, Wu, S, Dean, M, Costello, J C, Theodorescu, D
Published in Oncogene (05.01.2017)
Published in Oncogene (05.01.2017)
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Journal Article
stochastic nature of larval connectivity among nearshore marine populations
Siegel, D.A, Mitarai, S, Costello, C.J, Gaines, S.D, Kendall, B.E, Warner, R.R, Winters, K.B
Published in Proceedings of the National Academy of Sciences - PNAS (01.07.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (01.07.2008)
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Journal Article
Metastatic cells are preferentially vulnerable to lysosomal inhibition
Morgan, Michael J., Fitzwalter, Brent E., Owens, Charles R., Powers, Rani K., Sottnik, Joseph L., Gamez, Graciela, Costello, James C., Theodorescu, Dan, Thorburn, Andrew
Published in Proceedings of the National Academy of Sciences - PNAS (04.09.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (04.09.2018)
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Journal Article
Allele-Specific DNA Methylation and Its Interplay with Repressive Histone Marks at Promoter-Mutant TERT Genes
Stern, Josh Lewis, Paucek, Richard D., Huang, Franklin W., Ghandi, Mahmoud, Nwumeh, Ronald, Costello, James C., Cech, Thomas R.
Published in Cell reports (Cambridge) (26.12.2017)
Published in Cell reports (Cambridge) (26.12.2017)
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Journal Article
Zinc is decreased in prostate cancer: an established relationship of prostate cancer
Costello, Leslie C, Franklin, Renty B
Published in Journal of biological inorganic chemistry (01.01.2011)
Published in Journal of biological inorganic chemistry (01.01.2011)
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Journal Article
Concurrent alterations in TERT, KDM6A, and the BRCA pathway in bladder cancer
Nickerson, Michael L, Dancik, Garrett M, Im, Kate M, Edwards, Michael G, Turan, Sevilay, Brown, Joseph, Ruiz-Rodriguez, Christina, Owens, Charles, Costello, James C, Guo, Guangwu, Tsang, Shirley X, Li, Yingrui, Zhou, Quan, Cai, Zhiming, Moore, Lee E, Lucia, M Scott, Dean, Michael, Theodorescu, Dan
Published in Clinical cancer research (15.09.2014)
Published in Clinical cancer research (15.09.2014)
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Inhibition of the CCL2 receptor, CCR2, enhances tumor response to immune checkpoint therapy
Tu, Megan M, Abdel-Hafiz, Hany A, Jones, Robert T, Jean, Annie, Hoff, Katelyn J, Duex, Jason E, Chauca-Diaz, Ana, Costello, James C, Dancik, Garrett M, Tamburini, Beth A Jirón, Czerniak, Bogdan, Kaye, Jonathan, Theodorescu, Dan
Published in Communications biology (27.11.2020)
Published in Communications biology (27.11.2020)
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Journal Article
ProstaMine: a bioinformatics tool for identifying subtype-specific co-alterations associated with aggressiveness in prostate cancer
Orman, Michael V, Sreekanth, Varsha, Laajala, Teemu D, Cramer, Scott D, Costello, James C
Published in Frontiers in pharmacology (01.05.2024)
Published in Frontiers in pharmacology (01.05.2024)
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