Detection and Surveillance of Bladder Cancer Using Urine Tumor DNA
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Published in Cancer discovery (01.04.2019)
Published in Cancer discovery (01.04.2019)
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Transcriptome sequencing from diverse human populations reveals differentiated regulatory architecture
Martin, Alicia R, Costa, Helio A, Lappalainen, Tuuli, Henn, Brenna M, Kidd, Jeffrey M, Yee, Muh-Ching, Grubert, Fabian, Cann, Howard M, Snyder, Michael, Montgomery, Stephen B, Bustamante, Carlos D
Published in PLoS genetics (01.08.2014)
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Discovery and functional characterization of a neomorphic PTEN mutation
Costa, Helio A., Leitner, Michael G., Sos, Martin L., Mavrantoni, Angeliki, Rychkova, Anna, Johnson, Jeffrey R., Newton, Billy W., Yee, Muh-Ching, De La Vega, Francisco M., Ford, James M., Krogan, Nevan J., Shokat, Kevan M., Oliver, Dominik, Halaszovich, Christian R., Bustamante, Carlos D.
Published in Proceedings of the National Academy of Sciences - PNAS (10.11.2015)
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Gene‐specific criteria for PTEN variant curation: Recommendations from the ClinGen PTEN Expert Panel
Mester, Jessica L., Ghosh, Rajarshi, Pesaran, Tina, Huether, Robert, Karam, Rachid, Hruska, Kathleen S., Costa, Helio A., Lachlan, Katherine, Ngeow, Joanne, Barnholtz‐Sloan, Jill, Sesock, Kaitlin, Hernandez, Felicia, Zhang, Liying, Milko, Laura, Plon, Sharon E., Hegde, Madhuri, Eng, Charis
Published in Human mutation (01.11.2018)
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Clinical Accuracy and Impact of Plasma Cell-Free DNA Fungal Polymerase Chain Reaction Panel for Noninvasive Diagnosis of Fungal Infection
Senchyna, Fiona, Hogan, Catherine A, Murugesan, Kanagavel, Moreno, Angel, Ho, Dora Y, Subramanian, Aruna, Schwenk, Hayden T, Budvytiene, Indre, Costa, Helio A, Gombar, Saurabh, Banaei, Niaz
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Genomic Evidence for Local Adaptation of Hunter-Gatherers to the African Rainforest
Lopez, Marie, Choin, Jeremy, Sikora, Martin, Siddle, Katherine, Harmant, Christine, Costa, Helio A., Silvert, Martin, Mouguiama-Daouda, Patrick, Hombert, Jean-Marie, Froment, Alain, Le Bomin, Sylvie, Perry, George H., Barreiro, Luis B., Bustamante, Carlos D., Verdu, Paul, Patin, Etienne, Quintana-Murci, Lluís
Published in Current biology (09.09.2019)
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Neoantigen-specific cytotoxic Tr1 CD4 T cells suppress cancer immunotherapy
Sultan, Hussein, Takeuchi, Yoshiko, Ward, Jeffrey P., Sharma, Naveen, Liu, Tian-Tian, Sukhov, Vladimir, Firulyova, Maria, Song, Yuang, Ameh, Samuel, Brioschi, Simone, Khantakova, Darya, Arthur, Cora D., White, J. Michael, Kohlmiller, Heather, Salazar, Andres M., Burns, Robert, Costa, Helio A., Moynihan, Kelly D., Yeung, Yik Andy, Djuretic, Ivana, Schumacher, Ton N., Sheehan, Kathleen C. F., Colonna, Marco, Allison, James P., Murphy, Kenneth M., Artyomov, Maxim N., Schreiber, Robert D.
Published in Nature (London) (01.08.2024)
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Promoting appropriate genetic testing: the impact of a combined test review and consultative service
Suarez, Carlos J., Yu, Linbo, Downs, Natalie, Costa, Helio A., Stevenson, David A.
Published in Genetics in medicine (01.09.2017)
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High-throughput Sequencing of Subcutaneous Panniculitis-like T-Cell Lymphoma Reveals Candidate Pathogenic Mutations
Fernandez-Pol, Sebastian, Costa, Helio A, Steiner, David F, Ma, Lisa, Merker, Jason D, Kim, Youn H, Arber, Daniel A, Kim, Jinah
Published in Applied immunohistochemistry & molecular morphology (01.11.2019)
Published in Applied immunohistochemistry & molecular morphology (01.11.2019)
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Structural Variation Detection by Proximity Ligation from Formalin-Fixed, Paraffin-Embedded Tumor Tissue
Troll, Christopher J., Putnam, Nicholas H., Hartley, Paul D., Rice, Brandon, Blanchette, Marco, Siddiqui, Sameed, Ganbat, Javkhlan-Ochir, Powers, Martin P., Ramakrishnan, Ramesh, Kunder, Christian A., Bustamante, Carlos D., Zehnder, James L., Green, Richard E., Costa, Helio A.
Published in The Journal of molecular diagnostics : JMD (01.05.2019)
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Increasing Clinical Trial Accrual via Automated Matching of Biomarker Criteria
Chen, Jessica W, Kunder, Christian A, Bui, Nam, Zehnder, James L, Costa, Helio A, Stehr, Henning
Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2020)
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Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2020)
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LitGen: Genetic Literature Recommendation Guided by Human Explanations
Nie, Allen, Pineda, Arturo L, Wright, Matt W, Wand, Hannah, Wulf, Bryan, Costa, Helio A, Patel, Ronak Y, Bustamante, Carlos D, Zou, James
Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2020)
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Tumor Molecular Profiling Aids in Determining Tissue of Origin and Therapy for Metastatic Adenocarcinoma in a Patient With Multiple Primary Malignancies
Costa, Helio A, Reyes, Rochelle, Mills, Meredith, Zehnder, James L, Sledge, George, Curtis, Christina, Ford, James M, Suarez, Carlos J
Published in JCO precision oncology (01.11.2018)
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Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact
da Silveira, Willian A., Fazelinia, Hossein, Rosenthal, Sara Brin, Laiakis, Evagelia C., Kim, Man S., Meydan, Cem, Kidane, Yared, Rathi, Komal S., Smith, Scott M., Stear, Benjamin, Ying, Yue, Zhang, Yuanchao, Foox, Jonathan, Zanello, Susana, Crucian, Brian, Wang, Dong, Nugent, Adrienne, Costa, Helio A., Zwart, Sara R., Schrepfer, Sonja, Elworth, R.A. Leo, Sapoval, Nicolae, Treangen, Todd, MacKay, Matthew, Gokhale, Nandan S., Horner, Stacy M., Singh, Larry N., Wallace, Douglas C., Willey, Jeffrey S., Schisler, Jonathan C., Meller, Robert, McDonald, J. Tyson, Fisch, Kathleen M., Hardiman, Gary, Taylor, Deanne, Mason, Christopher E., Costes, Sylvain V., Beheshti, Afshin
Published in Cell (25.11.2020)
Published in Cell (25.11.2020)
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Abstract 5655: Association between tumor genomic variants and the long term post surgical recurrence as detected by a tumor informed ctDNA assay
Friedman, Noah, Richters, Megan, Ortiz, J. Bryce, Burns, Robert, Bristow, Sara L., Liu, Minetta C., Aleshin, Alexey, Jurdi, Adham, Costa, Helio A.
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Clinical Accuracy and Impact of Plasma Cell-Free DNA Fungal PCR Panel for Non-Invasive Diagnosis of Fungal Infection
Senchyna, Fiona, Hogan, Catherine A, Murugesan, Kanagavel, Moreno, Angel, Ho, Dora Y, Subramanian, Aruna, Schwenk, Hayden T, Budvytiene, Indre, Costa, Helio A, Gombar, Saurabh, Banaei, Niaz
Published in Clinical infectious diseases (19.02.2021)
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Published in Clinical infectious diseases (19.02.2021)
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NASA GeneLab RNA-seq consensus pipeline: Standardized processing of short-read RNA-seq data
Overbey, Eliah G., Saravia-Butler, Amanda M., Zhang, Zhe, Rathi, Komal S., Fogle, Homer, da Silveira, Willian A., Barker, Richard J., Bass, Joseph J., Beheshti, Afshin, Berrios, Daniel C., Blaber, Elizabeth A., Cekanaviciute, Egle, Costa, Helio A., Davin, Laurence B., Fisch, Kathleen M., Gebre, Samrawit G., Geniza, Matthew, Gilbert, Rachel, Gilroy, Simon, Hardiman, Gary, Herranz, Raúl, Kidane, Yared H., Kruse, Colin P.S., Lee, Michael D., Liefeld, Ted, Lewis, Norman G., McDonald, J. Tyson, Meller, Robert, Mishra, Tejaswini, Perera, Imara Y., Ray, Shayoni, Reinsch, Sigrid S., Rosenthal, Sara Brin, Strong, Michael, Szewczyk, Nathaniel J., Tahimic, Candice G.T., Taylor, Deanne M., Vandenbrink, Joshua P., Villacampa, Alicia, Weging, Silvio, Wolverton, Chris, Wyatt, Sarah E., Zea, Luis, Costes, Sylvain V., Galazka, Jonathan M.
Published in iScience (23.04.2021)
Published in iScience (23.04.2021)
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Changes on the physicochemical and fatty acid profile of meat induced by inclusion of biscuit bran in lamb diet
Alencar, Renata T, Vega, Wilder H O, Silva, Luiza N C DA, Costa, Hélio H A, Parente, Michelle O M, Lima, Lisiane D DE, Landim, Aline V
Published in Anais da Academia Brasileira de Ciências (01.01.2022)
Published in Anais da Academia Brasileira de Ciências (01.01.2022)
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