Sources of erroneous sequences and artifact chimeric reads in next generation sequencing of genomic DNA from formalin-fixed paraffin-embedded samples
Haile, Simon, Corbett, Richard D, Bilobram, Steve, Bye, Morgan H, Kirk, Heather, Pandoh, Pawan, Trinh, Eva, MacLeod, Tina, McDonald, Helen, Bala, Miruna, Miller, Diane, Novik, Karen, Coope, Robin J, Moore, Richard A, Zhao, Yongjun, Mungall, Andrew J, Ma, Yussanne, Holt, Rob A, Jones, Steven J, Marra, Marco A
Published in Nucleic acids research (25.01.2019)
Published in Nucleic acids research (25.01.2019)
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Extraction-free clinical detection of SARS-CoV-2 virus from saline gargle samples using Hamilton STARlet liquid handler
Gadkar, Vijay J, Goldfarb, David M, Al-Rawahi, Ghada N, Srigley, Jocelyn A, Smailus, Duane E, Coope, Robin J N, Pleasance, Stephen, Watson, Nicole, Chen, Tammy, Lam, Sunny, Hoang, Linda, Tilley, Peter A G
Published in Scientific reports (14.03.2023)
Published in Scientific reports (14.03.2023)
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Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics' GemCode Sequencing Data
Coombe, Lauren, Warren, René L, Jackman, Shaun D, Yang, Chen, Vandervalk, Benjamin P, Moore, Richard A, Pleasance, Stephen, Coope, Robin J, Bohlmann, Joerg, Holt, Robert A, Jones, Steven J M, Birol, Inanc
Published in PloS one (15.09.2016)
Published in PloS one (15.09.2016)
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Evaluation of protocols for rRNA depletion-based RNA sequencing of nanogram inputs of mammalian total RNA
Haile, Simon, Corbett, Richard D, Bilobram, Steve, Mungall, Karen, Grande, Bruno M, Kirk, Heather, Pandoh, Pawan, MacLeod, Tina, McDonald, Helen, Bala, Miruna, Coope, Robin J, Moore, Richard A, Mungall, Andrew J, Zhao, Yongjun, Morin, Ryan D, Jones, Steven J, Marra, Marco A
Published in PloS one (31.10.2019)
Published in PloS one (31.10.2019)
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Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis
Haile, Simon, Pandoh, Pawan, McDonald, Helen, Corbett, Richard D, Tsao, Philip, Kirk, Heather, MacLeod, Tina, Jones, Martin, Bilobram, Steve, Brooks, Denise, Smailus, Duane, Steidl, Christian, Scott, David W, Bala, Miruna, Hirst, Martin, Miller, Diane, Moore, Richard A, Mungall, Andrew J, Coope, Robin J, Ma, Yussanne, Zhao, Yongjun, Holt, Rob A, Jones, Steven J, Marra, Marco A
Published in PloS one (01.06.2017)
Published in PloS one (01.06.2017)
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Increasing quality, throughput and speed of sample preparation for strand-specific messenger RNA sequencing
Haile, Simon, Corbett, Richard D, MacLeod, Tina, Bilobram, Steve, Smailus, Duane, Tsao, Philip, Kirk, Heather, McDonald, Helen, Pandoh, Pawan, Bala, Miruna, Hirst, Martin, Miller, Diane, Moore, Richard A, Mungall, Andrew J, Schein, Jacquie, Coope, Robin J, Ma, Yussanne, Zhao, Yongjun, Holt, Rob A, Jones, Steven J, Marra, Marco A
Published in BMC genomics (05.07.2017)
Published in BMC genomics (05.07.2017)
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A Clinically Validated Diagnostic Second-Generation Sequencing Assay for Detection of Hereditary BRCA1 and BRCA2 Mutations
Bosdet, Ian E, Docking, T. Roderick, Butterfield, Yaron S, Mungall, Andrew J, Zeng, Thomas, Coope, Robin J, Yorida, Erika, Chow, Katie, Bala, Miruna, Young, Sean S, Hirst, Martin, Birol, Inanc, Moore, Richard A, Jones, Steven J, Marra, Marco A, Holt, Rob, Karsan, Aly
Published in The Journal of molecular diagnostics : JMD (01.11.2013)
Published in The Journal of molecular diagnostics : JMD (01.11.2013)
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A Scalable Strand-Specific Protocol Enabling Full-Length Total RNA Sequencing From Single Cells
Haile, Simon, Corbett, Richard D., LeBlanc, Veronique G., Wei, Lisa, Pleasance, Stephen, Bilobram, Steve, Nip, Ka Ming, Brown, Kirstin, Trinh, Eva, Smith, Jillian, Trinh, Diane L., Bala, Miruna, Chuah, Eric, Coope, Robin J. N., Moore, Richard A., Mungall, Andrew J., Mungall, Karen L., Zhao, Yongjun, Hirst, Martin, Aparicio, Samuel, Birol, Inanc, Jones, Steven J. M., Marra, Marco A.
Published in Frontiers in genetics (03.06.2021)
Published in Frontiers in genetics (03.06.2021)
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The Genome of the Northern Sea Otter (Enhydra lutris kenyoni)
Jones, Samantha J, Haulena, Martin, Taylor, Gregory A, Chan, Simon, Bilobram, Steven, Warren, René L, Hammond, S Austin, Mungall, Karen L, Choo, Caleb, Kirk, Heather, Pandoh, Pawan, Ally, Adrian, Dhalla, Noreen, Tam, Angela K Y, Troussard, Armelle, Paulino, Daniel, Coope, Robin J N, Mungall, Andrew J, Moore, Richard, Zhao, Yongjun, Birol, Inanc, Ma, Yussanne, Marra, Marco, Jones, Steven J M
Published in Genes (11.12.2017)
Published in Genes (11.12.2017)
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Complete Mitochondrial Genome of a Gymnosperm, Sitka Spruce (Picea sitchensis), Indicates a Complex Physical Structure
Jackman, Shaun D, Coombe, Lauren, Warren, René L, Kirk, Heather, Trinh, Eva, MacLeod, Tina, Pleasance, Stephen, Pandoh, Pawan, Zhao, Yongjun, Coope, Robin J, Bousquet, Jean, Bohlmann, Joerg, Jones, Steven J M, Birol, Inanc
Published in Genome biology and evolution (01.07.2020)
Published in Genome biology and evolution (01.07.2020)
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Optimization of magnetic bead-based nucleic acid extraction for SARS-CoV-2 testing using readily available reagents
Haile, Simon, Nikiforuk, Aidan M., Pandoh, Pawan K., Twa, David D.W., Smailus, Duane E., Nguyen, Jason, Pleasance, Stephen, Wong, Angus, Zhao, Yongjun, Eisler, Diane, Moksa, Michelle, Cao, Qi, Wong, Marcus, Su, Edmund, Krzywinski, Martin, Nelson, Jessica, Mungall, Andrew J., Tsang, Frankie, Prentice, Leah M., Jassem, Agatha, Manges, Amee R., Jones, Steven J.M., Coope, Robin J., Prystajecky, Natalie, Marra, Marco A., Krajden, Mel, Hirst, Martin
Published in Journal of virological methods (01.01.2022)
Published in Journal of virological methods (01.01.2022)
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Rapid microdissection of tissue sections via laser ablation
Coope, Robin Jn, Pleasance, Stephen, Pandoh, Pawan, Schlosser, Colin, Corbett, Richard D, Marra, Marco A
Published in Journal of clinical pathology (01.06.2024)
Published in Journal of clinical pathology (01.06.2024)
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Construction of Strand-seq libraries in open nanoliter arrays
Hanlon, Vincent C.T., Chan, Daniel D., Hamadeh, Zeid, Wang, Yanni, Mattsson, Carl-Adam, Spierings, Diana C.J., Coope, Robin J.N., Lansdorp, Peter M.
Published in Cell reports methods (24.01.2022)
Published in Cell reports methods (24.01.2022)
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Whole‐slide laser microdissection for tumour enrichment
Coope, Robin JN, Schlosser, Colin, Corbett, Richard D, Pleasance, Stephen, Tessier‐Cloutier, Basile, Pandoh, Pawan, Kirk, Heather, Haile, Simon, Zhao, Yongjun, Mungall, Andrew J, Marra, Marco A
Published in The Journal of pathology (01.02.2021)
Published in The Journal of pathology (01.02.2021)
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A feasibility study of pelvic morphology for curved implants
Zakariaee, Roja, MSc, Schlosser, Colin L., BASc, Baker, Daniel R, Meek, Robert N., MD, Coope, Robin J.N., PhD
Published in Injury (01.10.2016)
Published in Injury (01.10.2016)
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The Genome of the Beluga Whale (Delphinapterus leucas)
Jones, Steven J M, Taylor, Gregory A, Chan, Simon, Warren, René L, Hammond, S Austin, Bilobram, Steven, Mordecai, Gideon, Suttle, Curtis A, Miller, Kristina M, Schulze, Angela, Chan, Amy M, Jones, Samantha J, Tse, Kane, Li, Irene, Cheung, Dorothy, Mungall, Karen L, Choo, Caleb, Ally, Adrian, Dhalla, Noreen, Tam, Angela K Y, Troussard, Armelle, Kirk, Heather, Pandoh, Pawan, Paulino, Daniel, Coope, Robin J N, Mungall, Andrew J, Moore, Richard, Zhao, Yongjun, Birol, Inanc, Ma, Yussanne, Marra, Marco, Haulena, Martin
Published in Genes (11.12.2017)
Published in Genes (11.12.2017)
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Modulation of retroreflection by controlled frustration of total internal reflection
Coope, Robin J N, Whitehead, Lorne A, Kotlicki, Andrzej
Published in Applied optics (2004) (01.09.2002)
Published in Applied optics (2004) (01.09.2002)
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