Comprehensive Cell Surface Protein Profiling Identifies Specific Markers of Human Naive and Primed Pluripotent States
Collier, Amanda J., Panula, Sarita P., Schell, John Paul, Chovanec, Peter, Plaza Reyes, Alvaro, Petropoulos, Sophie, Corcoran, Anne E., Walker, Rachael, Douagi, Iyadh, Lanner, Fredrik, Rugg-Gunn, Peter J.
Published in Cell stem cell (01.06.2017)
Published in Cell stem cell (01.06.2017)
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Journal Article
Comparative Principles of DNA Methylation Reprogramming during Human and Mouse In Vitro Primordial Germ Cell Specification
von Meyenn, Ferdinand, Berrens, Rebecca V., Andrews, Simon, Santos, Fátima, Collier, Amanda J., Krueger, Felix, Osorno, Rodrigo, Dean, Wendy, Rugg-Gunn, Peter J., Reik, Wolf
Published in Developmental cell (10.10.2016)
Published in Developmental cell (10.10.2016)
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Journal Article
Deletion of the Polycomb-Group Protein EZH2 Leads to Compromised Self-Renewal and Differentiation Defects in Human Embryonic Stem Cells
Collinson, Adam, Collier, Amanda J., Morgan, Natasha P., Sienerth, Arnold R., Chandra, Tamir, Andrews, Simon, Rugg-Gunn, Peter J.
Published in Cell reports (Cambridge) (06.12.2016)
Published in Cell reports (Cambridge) (06.12.2016)
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Journal Article
Species-specific regulation of XIST by the JPX/FTX orthologs
Rosspopoff, Olga, Cazottes, Emmanuel, Huret, Christophe, Loda, Agnese, Collier, Amanda J, Casanova, Miguel, Rugg-Gunn, Peter J, Heard, Edith, Ouimette, Jean-François, Rougeulle, Claire
Published in Nucleic acids research (21.03.2023)
Published in Nucleic acids research (21.03.2023)
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Journal Article
Widespread reorganisation of pluripotent factor binding and gene regulatory interactions between human pluripotent states
Chovanec, Peter, Collier, Amanda J., Krueger, Christel, Várnai, Csilla, Semprich, Claudia I., Schoenfelder, Stefan, Corcoran, Anne E., Rugg-Gunn, Peter J.
Published in Nature communications (07.04.2021)
Published in Nature communications (07.04.2021)
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Journal Article
Global reorganisation of cis -regulatory units upon lineage commitment of human embryonic stem cells
Freire-Pritchett, Paula, Schoenfelder, Stefan, Várnai, Csilla, Wingett, Steven W, Cairns, Jonathan, Collier, Amanda J, García-Vílchez, Raquel, Furlan-Magaril, Mayra, Osborne, Cameron S, Fraser, Peter, Rugg-Gunn, Peter J, Spivakov, Mikhail
Published in eLife (23.03.2017)
Published in eLife (23.03.2017)
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Journal Article
TGFβ signalling is required to maintain pluripotency of human naïve pluripotent stem cells
Osnato, Anna, Brown, Stephanie, Krueger, Christel, Andrews, Simon, Collier, Amanda J, Nakanoh, Shota, Quiroga Londoño, Mariana, Wesley, Brandon T, Muraro, Daniele, Brumm, A Sophie, Niakan, Kathy K, Vallier, Ludovic, Ortmann, Daniel, Rugg-Gunn, Peter J
Published in eLife (31.08.2021)
Published in eLife (31.08.2021)
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Journal Article
Cell-Surface Proteomics Identifies Differences in Signaling and Adhesion Protein Expression between Naive and Primed Human Pluripotent Stem Cells
Wojdyla, Katarzyna, Collier, Amanda J., Fabian, Charlene, Nisi, Paola S., Biggins, Laura, Oxley, David, Rugg-Gunn, Peter J.
Published in Stem cell reports (12.05.2020)
Published in Stem cell reports (12.05.2020)
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Journal Article
The transcription factor code in iPSC reprogramming
Deng, Weixian, Jacobson, Elsie C, Collier, Amanda J, Plath, Kathrin
Published in Current opinion in genetics & development (01.10.2021)
Published in Current opinion in genetics & development (01.10.2021)
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Journal Article
XACT Noncoding RNA Competes with XIST in the Control of X Chromosome Activity during Human Early Development
Vallot, Céline, Patrat, Catherine, Collier, Amanda J., Huret, Christophe, Casanova, Miguel, Liyakat Ali, Tharvesh M., Tosolini, Matteo, Frydman, Nelly, Heard, Edith, Rugg-Gunn, Peter J., Rougeulle, Claire
Published in Cell stem cell (05.01.2017)
Published in Cell stem cell (05.01.2017)
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Journal Article
XIST directly regulates X-linked and autosomal genes in naive human pluripotent cells
Dror, Iris, Chitiashvili, Tsotne, Tan, Shawn Y X, Cano, Clara T, Sahakyan, Anna, Markaki, Yolanda, Chronis, Constantinos, Collier, Amanda J, Deng, Weixian, Liang, Guohao, Sun, Yu, Afasizheva, Anna, Miller, Jarrett, Xiao, Wen, Black, Douglas L, Ding, Fangyuan, Plath, Kathrin
Published in Cell (04.01.2024)
Published in Cell (04.01.2024)
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Journal Article
Integrated multi-omics reveal polycomb repressive complex 2 restricts human trophoblast induction
Zijlmans, Dick W., Talon, Irene, Verhelst, Sigrid, Bendall, Adam, Van Nerum, Karlien, Javali, Alok, Malcolm, Andrew A., van Knippenberg, Sam S. F. A., Biggins, Laura, To, San Kit, Janiszewski, Adrian, Admiraal, Danielle, Knops, Ruth, Corthout, Nikky, Balaton, Bradley P., Georgolopoulos, Grigorios, Panda, Amitesh, Bhanu, Natarajan V., Collier, Amanda J., Fabian, Charlene, Allsop, Ryan N., Chappell, Joel, Pham, Thi Xuan Ai, Oberhuemer, Michael, Ertekin, Cankat, Vanheer, Lotte, Athanasouli, Paraskevi, Lluis, Frederic, Deforce, Dieter, Jansen, Joop H., Garcia, Benjamin A., Vermeulen, Michiel, Rivron, Nicolas, Dhaenens, Maarten, Marks, Hendrik, Rugg-Gunn, Peter J., Pasque, Vincent
Published in Nature cell biology (01.06.2022)
Published in Nature cell biology (01.06.2022)
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Journal Article
Comparative Principles of DNA Methylation Reprogramming during Human and Mouse In Vitro Primordial Germ Cell Specification
von Meyenn, Ferdinand, Berrens, Rebecca V., Andrews, Simon, Santos, Fátima, Collier, Amanda J., Krueger, Felix, Osorno, Rodrigo, Dean, Wendy, Rugg-Gunn, Peter J., Reik, Wolf
Published in Developmental cell (05.12.2022)
Published in Developmental cell (05.12.2022)
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Journal Article
Pressure-Driven Mitochondrial Transfer Pipeline Generates Mammalian Cells of Desired Genetic Combinations and Fates
Patananan, Alexander N., Sercel, Alexander J., Wu, Ting-Hsiang, Ahsan, Fasih M., Torres, Alejandro, Kennedy, Stephanie A.L., Vandiver, Amy, Collier, Amanda J., Mehrabi, Artin, Van Lew, Jon, Zakin, Lise, Rodriguez, Noe, Sixto, Marcos, Tadros, Wael, Lazar, Adam, Sieling, Peter A., Nguyen, Thang L., Dawson, Emma R., Braas, Daniel, Golovato, Justin, Cisneros, Luis, Vaske, Charles, Plath, Kathrin, Rabizadeh, Shahrooz, Niazi, Kayvan R., Chiou, Pei-Yu, Teitell, Michael A.
Published in Cell reports (Cambridge) (29.12.2020)
Published in Cell reports (Cambridge) (29.12.2020)
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Journal Article
TGFβ superfamily signaling regulates the state of human stem cell pluripotency and capacity to create well-structured telencephalic organoids
Watanabe, Momoko, Buth, Jessie E., Haney, Jillian R., Vishlaghi, Neda, Turcios, Felix, Elahi, Lubayna S., Gu, Wen, Pearson, Caroline A., Kurdian, Arinnae, Baliaouri, Natella V., Collier, Amanda J., Miranda, Osvaldo A., Dunn, Natassia, Chen, Di, Sabri, Shan, Torre-Ubieta, Luis de la, Clark, Amander T., Plath, Kathrin, Christofk, Heather R., Kornblum, Harley I., Gandal, Michael J., Novitch, Bennett G.
Published in Stem cell reports (11.10.2022)
Published in Stem cell reports (11.10.2022)
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Journal Article
Genome-wide screening identifies Polycomb repressive complex 1.3 as an essential regulator of human naïve pluripotent cell reprogramming
Collier, Amanda J, Bendall, Adam, Fabian, Charlene, Malcolm, Andrew A, Tilgner, Katarzyna, Semprich, Claudia I, Wojdyla, Katarzyna, Nisi, Paola Serena, Kishore, Kamal, Roamio Franklin, Valar Nila, Mirshekar-Syahkal, Bahar, D'Santos, Clive, Plath, Kathrin, Yusa, Kosuke, Rugg-Gunn, Peter J
Published in Science advances (25.03.2022)
Published in Science advances (25.03.2022)
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Journal Article
TGF[beta] signalling is required to maintain pluripotency of human naive pluripotent stem cells
Osnato, Anna, Brown, Stephanie, Krueger, Christel, Andrews, Simon, Collier, Amanda J, Nakanoh, Shota, Quiroga Londoño, Mariana, Wesley, Brandon T, Muraro, Daniele, Brumm, A Sophie, Niakan, Kathy K, Vallier, Ludovic, Ortmann, Daniel, Rugg-Gunn, Peter J
Published in eLife (31.08.2021)
Published in eLife (31.08.2021)
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Journal Article
TGFβ signalling is required to maintain pluripotency of human naïve pluripotent stem cells
Osnato, Anna, Brown, Stephanie, Krueger, Christel, Andrews, Simon, Collier, Amanda J, Nakanoh, Shota, Mariana Quiroga Londoño, Wesley, Brandon T, Muraro, Daniele, Brumm, Sophie, Niakan, Kathy, Vallier, Ludovic, Ortmann, Daniel, Rugg-Gunn, Peter J
Published in bioRxiv (11.07.2021)
Published in bioRxiv (11.07.2021)
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Paper
TGFβ superfamily signaling regulates the state of human stem cell pluripotency and competency to create telencephalic organoids
Watanabe, Momoko, Haney, Jillian R, Vishlaghi, Neda, Turcios, Felix, Buth, Jessie E, Gu, Wen, Collier, Amanda J, Miranda, Osvaldo A, Chen, Di, Sabri, Shan, Clark, Amander T, Plath, Kathrin, Christofk, Heather R, Gandal, Michael J, Novitch, Bennett G
Published in bioRxiv (13.12.2019)
Published in bioRxiv (13.12.2019)
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