Multiple wheat genomes reveal global variation in modern breeding
Walkowiak, Sean, Gao, Liangliang, Monat, Cecile, Haberer, Georg, Kassa, Mulualem T, Brinton, Jemima, Ramirez-Gonzalez, Ricardo H, Kolodziej, Markus C, Delorean, Emily, Thambugala, Dinushika, Klymiuk, Valentyna, Byrns, Brook, Gundlach, Heidrun, Bandi, Venkat, Siri, Jorge Nunez, Nilsen, Kirby, Aquino, Catharine, Himmelbach, Axel, Copetti, Dario, Ban, Tomohiro, Venturini, Luca, Bevan, Michael, Clavijo, Bernardo, Koo, Dal-Hoe, Ens, Jennifer, Wiebe, Krystalee, N'Diaye, Amidou, Fritz, Allen K, Gutwin, Carl, Fiebig, Anne, Fosker, Christine, Fu, Bin Xiao, Accinelli, Gonzalo Garcia, Gardner, Keith A, Fradgley, Nick, Gutierrez-Gonzalez, Juan, Halstead-Nussloch, Gwyneth, Hatakeyama, Masaomi, Koh, Chu Shin, Deek, Jasline, Costamagna, Alejandro C, Fobert, Pierre, Heavens, Darren, Kanamori, Hiroyuki, Kawaura, Kanako, Kobayashi, Fuminori, Krasileva, Ksenia, Kuo, Tony, McKenzie, Neil, Murata, Kazuki, Nabeka, Yusuke, Paape, Timothy, Padmarasu, Sudharsan, Percival-Alwyn, Lawrence, Kagale, Sateesh, Scholz, Uwe, Sese, Jun, Juliana, Philomin, Singh, Ravi, Shimizu-Inatsugi, Rie, Swarbreck, David, Cockram, James, Budak, Hikmet, Tameshige, Toshiaki, Tanaka, Tsuyoshi, Tsuji, Hiroyuki, Wright, Jonathan, Wu, Jianzhong, Steuernagel, Burkhard, Small, Ian, Cloutier, Sylvie, Keeble-Gagnère, Gabriel, Muehlbauer, Gary, Tibbets, Josquin, Nasuda, Shuhei, Melonek, Joanna, Hucl, Pierre J, Sharpe, Andrew G, Clark, Matthew, Legg, Erik, Bharti, Arvind, Langridge, Peter, Hall, Anthony, Uauy, Cristobal, Mascher, Martin, Krattinger, Simon G, Handa, Hirokazu, Shimizu, Kentaro K, Distelfeld, Assaf, Chalmers, Ken, Keller, Beat, Mayer, Klaus F X, Poland, Jesse, Stein, Nils, McCartney, Curt A, Spannagl, Manuel, Wicker, Thomas, Pozniak, Curtis J
Published in Nature (London) (10.12.2020)
Published in Nature (London) (10.12.2020)
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Genetic Structure of the Norwegian Parastagonospora nodorum Population
Lin, Min, Ficke, Andrea, Cockram, James, Lillemo, Morten
Published in Frontiers in microbiology (16.06.2020)
Published in Frontiers in microbiology (16.06.2020)
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Global agricultural intensification during climate change: a role for genomics
Abberton, Michael, Batley, Jacqueline, Bentley, Alison, Bryant, John, Cai, Hongwei, Cockram, James, Costa de Oliveira, Antonio, Cseke, Leland J, Dempewolf, Hannes, De Pace, Ciro, Edwards, David, Gepts, Paul, Greenland, Andy, Hall, Anthony E, Henry, Robert, Hori, Kiyosumi, Howe, Glenn Thomas, Hughes, Stephen, Humphreys, Mike, Lightfoot, David, Marshall, Athole, Mayes, Sean, Nguyen, Henry T, Ogbonnaya, Francis C, Ortiz, Rodomiro, Paterson, Andrew H, Tuberosa, Roberto, Valliyodan, Babu, Varshney, Rajeev K, Yano, Masahiro
Published in Plant biotechnology journal (01.04.2016)
Published in Plant biotechnology journal (01.04.2016)
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Limited haplotype diversity underlies polygenic trait architecture across 70 years of wheat breeding
Scott, Michael F, Fradgley, Nick, Bentley, Alison R, Brabbs, Thomas, Corke, Fiona, Gardner, Keith A, Horsnell, Richard, Howell, Phil, Ladejobi, Olufunmilayo, Mackay, Ian J, Mott, Richard, Cockram, James
Published in Genome Biology (06.05.2021)
Published in Genome Biology (06.05.2021)
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Outlook for coeliac disease patients: towards bread wheat with hypoimmunogenic gluten by gene editing of α- and γ-gliadin gene families
Jouanin, Aurélie, Schaart, Jan G, Boyd, Lesley A, Cockram, James, Leigh, Fiona J, Bates, Ruth, Wallington, Emma J, Visser, Richard G F, Smulders, Marinus J M
Published in BMC plant biology (01.08.2019)
Published in BMC plant biology (01.08.2019)
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Barley heads east: Genetic analyses reveal routes of spread through diverse Eurasian landscapes
Lister, Diane L, Jones, Huw, Oliveira, Hugo R, Petrie, Cameron A, Liu, Xinyi, Cockram, James, Kneale, Catherine J, Kovaleva, Olga, Jones, Martin K
Published in PloS one (18.07.2018)
Published in PloS one (18.07.2018)
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Journal Article
Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects
Kole, Chittaranjan, Muthamilarasan, Mehanathan, Henry, Robert, Edwards, David, Sharma, Rishu, Abberton, Michael, Batley, Jacqueline, Bentley, Alison, Blakeney, Michael, Bryant, John, Cai, Hongwei, Cakir, Mehmet, Cseke, Leland J, Cockram, James, de Oliveira, Antonio Costa, De Pace, Ciro, Dempewolf, Hannes, Ellison, Shelby, Gepts, Paul, Greenland, Andy, Hall, Anthony, Hori, Kiyosumi, Hughes, Stephen, Humphreys, Mike W, Iorizzo, Massimo, Ismail, Abdelbagi M, Marshall, Athole, Mayes, Sean, Nguyen, Henry T, Ogbonnaya, Francis C, Ortiz, Rodomiro, Paterson, Andrew H, Simon, Philipp W, Tohme, Joe, Tuberosa, Roberto, Valliyodan, Babu, Varshney, Rajeev K, Wullschleger, Stan D, Yano, Masahiro, Prasad, Manoj
Published in Frontiers in plant science (11.08.2015)
Published in Frontiers in plant science (11.08.2015)
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Journal Article
A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat
Adamski, Nikolai M, Borrill, Philippa, Brinton, Jemima, Harrington, Sophie A, Marchal, Clémence, Bentley, Alison R, Bovill, William D, Cattivelli, Luigi, Cockram, James, Contreras-Moreira, Bruno, Ford, Brett, Ghosh, Sreya, Harwood, Wendy, Hassani-Pak, Keywan, Hayta, Sadiye, Hickey, Lee T, Kanyuka, Kostya, King, Julie, Maccaferrri, Marco, Naamati, Guy, Pozniak, Curtis J, Ramirez-Gonzalez, Ricardo H, Sansaloni, Carolina, Trevaskis, Ben, Wingen, Luzie U, Wulff, Brande Bh, Uauy, Cristobal
Published in eLife (24.03.2020)
Published in eLife (24.03.2020)
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Journal Article
Genotypic, Developmental and Environmental Effects on the Rapidity of gs in Wheat: Impacts on Carbon Gain and Water-Use Efficiency
Faralli, Michele, Cockram, James, Ober, Eric, Wall, Shellie, Galle, Alexander, Van Rie, Jeroen, Raines, Christine, Lawson, Tracy
Published in Frontiers in plant science (17.04.2019)
Published in Frontiers in plant science (17.04.2019)
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Journal Article
Genome-wide association mapping to candidate polymorphism resolution in the unsequenced barley genome
Cockram, James, White, Jon, Zuluaga, Diana L., Smith, David, Comadran, Jordi, Macaulay, Malcolm, Luo, Zewei, Kearsey, Mike J., Werner, Peter, Harrap, David, Tapsell, Chris, Liu, Hui, Hedley, Peter E., Stein, Nils, Schulte, Daniela, Steuernagel, Burkhard, Marshall, David F., Thomas, William T. B., Ramsay, Luke, Mackay, Ian, Balding, David J., Waugh, Robbie, O'Sullivan, Donal M., Doebley, John
Published in Proceedings of the National Academy of Sciences - PNAS (14.12.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (14.12.2010)
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Journal Article
Genome dynamics explain the evolution of flowering time CCT domain gene families in the Poaceae
Cockram, James, Thiel, Thomas, Steuernagel, Burkhard, Stein, Nils, Taudien, Stefan, Bailey, Paul C, O'Sullivan, Donal M
Published in PloS one (24.09.2012)
Published in PloS one (24.09.2012)
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Modeling QTL-by-environment interactions for multi-parent populations
Li, Wenhao, Boer, Martin P., Joosen, Ronny V. L., Zheng, Chaozhi, Percival-Alwyn, Lawrence, Cockram, James, Van Eeuwijk, Fred A.
Published in Frontiers in plant science (31.07.2024)
Published in Frontiers in plant science (31.07.2024)
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Journal Article
An eight-parent multiparent advanced generation inter-cross population for winter-sown wheat: creation, properties, and validation
Mackay, Ian J, Bansept-Basler, Pauline, Barber, Toby, Bentley, Alison R, Cockram, James, Gosman, Nick, Greenland, Andy J, Horsnell, Richard, Howells, Rhian, O'Sullivan, Donal M, Rose, Gemma A, Howell, Phil J
Published in G3 : genes - genomes - genetics (01.09.2014)
Published in G3 : genes - genomes - genetics (01.09.2014)
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Journal Article
Dissecting the genetic basis of wheat blast resistance in the Brazilian wheat cultivar BR 18-Terena
Goddard, Rachel, Steed, Andrew, Chinoy, Catherine, Ferreira, Jéssica Rosset, Scheeren, Pedro Luiz, Maciel, João Leodato Nunes, Caierão, Eduardo, Torres, Gisele Abigail Montan, Consoli, Luciano, Santana, Flavio Martins, Fernandes, José Mauricio Cunha, Simmonds, James, Uauy, Cristobal, Cockram, James, Nicholson, Paul
Published in BMC plant biology (27.08.2020)
Published in BMC plant biology (27.08.2020)
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Journal Article
TEOSINTE BRANCHED1 Regulates Inflorescence Architecture and Development in Bread Wheat ( Triticum aestivum )
Dixon, Laura E., Greenwood, Julian R., Bencivenga, Stefano, Zhang, Peng, Cockram, James, Mellers, Gregory, Ramm, Kerrie, Cavanagh, Colin, Swain, Steve M., Boden, Scott A.
Published in The Plant cell (01.03.2018)
Published in The Plant cell (01.03.2018)
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Journal Article
Identification of Fusarium head blight resistance loci in two Brazilian wheat mapping populations
Goddard, Rachel, Steed, Andrew, Scheeren, Pedro Luiz, Maciel, João Leodato Nunes, Caierão, Eduardo, Torres, Gisele Abigail Montan, Consoli, Luciano, Santana, Flavio Martins, Fernandes, José Mauricio Cunha, Simmonds, James, Uauy, Cristobal, Cockram, James, Nicholson, Paul
Published in PloS one (08.03.2021)
Published in PloS one (08.03.2021)
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Journal Article
Genetic Dissection of Resistance to the Three Fungal Plant Pathogens Blumeria graminis , Zymoseptoria tritici , and Pyrenophora tritici-repentis Using a Multiparental Winter Wheat Population
Stadlmeier, Melanie, Jørgensen, Lise Nistrup, Corsi, Beatrice, Cockram, James, Hartl, Lorenz, Mohler, Volker
Published in G3 : genes - genomes - genetics (01.05.2019)
Published in G3 : genes - genomes - genetics (01.05.2019)
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Journal Article
Assessing European Wheat Sensitivities to Parastagonospora nodorum Necrotrophic Effectors and Fine-Mapping the Snn3-B1 Locus Conferring Sensitivity to the Effector SnTox3
Downie, Rowena C, Bouvet, Laura, Furuki, Eiko, Gosman, Nick, Gardner, Keith A, Mackay, Ian J, Campos Mantello, Camila, Mellers, Greg, Phan, Huyen T T, Rose, Gemma A, Tan, Kar-Chun, Oliver, Richard P, Cockram, James
Published in Frontiers in plant science (04.07.2018)
Published in Frontiers in plant science (04.07.2018)
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