Targeted CRISPR‐Cas9‐based gene knockouts in the model brown alga Ectocarpus
Badis, Yacine, Scornet, Delphine, Harada, Minori, Caillard, Céline, Godfroy, Olivier, Raphalen, Morgane, Gachon, Claire M. M., Coelho, Susana M., Motomura, Taizo, Nagasato, Chikako, Cock, J. Mark
Published in The New phytologist (01.09.2021)
Published in The New phytologist (01.09.2021)
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Journal Article
Histone modifications during the life cycle of the brown alga Ectocarpus
Bourdareau, Simon, Tirichine, Leila, Lombard, Bérangère, Loew, Damarys, Scornet, Delphine, Wu, Yue, Coelho, Susana M, Cock, J Mark
Published in Genome Biology (04.01.2021)
Published in Genome Biology (04.01.2021)
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Journal Article
Chromatin landscape associated with sexual differentiation in a UV sex determination system
Gueno, Josselin, Borg, Michael, Bourdareau, Simon, Cossard, Guillaume, Godfroy, Olivier, Lipinska, Agnieszka, Tirichine, Leila, Cock, J Mark, Coelho, Susana M
Published in Nucleic acids research (08.04.2022)
Published in Nucleic acids research (08.04.2022)
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Journal Article
Sexual dimorphism and the evolution of sex-biased gene expression in the brown alga ectocarpus
Lipinska, Agnieszka, Cormier, Alexandre, Luthringer, Rémy, Peters, Akira F, Corre, Erwan, Gachon, Claire M M, Cock, J Mark, Coelho, Susana M
Published in Molecular biology and evolution (01.06.2015)
Published in Molecular biology and evolution (01.06.2015)
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Journal Article
instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder
Baudry, Lyam, Guiglielmoni, Nadège, Marie-Nelly, Hervé, Cormier, Alexandre, Marbouty, Martial, Avia, Komlan, Mie, Yann Loe, Godfroy, Olivier, Sterck, Lieven, Cock, J. Mark, Zimmer, Christophe, Coelho, Susana M., Koszul, Romain
Published in Genome Biology (18.06.2020)
Published in Genome Biology (18.06.2020)
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Journal Article
A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp
Ahmed, Sophia, Cock, J. Mark, Pessia, Eugenie, Luthringer, Remy, Cormier, Alexandre, Robuchon, Marine, Sterck, Lieven, Peters, Akira F., Dittami, Simon M., Corre, Erwan, Valero, Myriam, Aury, Jean-Marc, Roze, Denis, Van de Peer, Yves, Bothwell, John, Marais, Gabriel A.B., Coelho, Susana M.
Published in Current biology (08.09.2014)
Published in Current biology (08.09.2014)
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Journal Article
Organelle inheritance and genome architecture variation in isogamous brown algae
Choi, Ji Won, Graf, Louis, Peters, Akira F., Cock, J. Mark, Nishitsuji, Koki, Arimoto, Asuka, Shoguchi, Eiichi, Nagasato, Chikako, Choi, Chang Geun, Yoon, Hwan Su
Published in Scientific reports (06.02.2020)
Published in Scientific reports (06.02.2020)
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Journal Article
Multiple gene movements into and out of haploid sex chromosomes
Lipinska, Agnieszka P, Toda, Nicholas R T, Heesch, Svenja, Peters, Akira F, Cock, J Mark, Coelho, Susana M
Published in Genome Biology (08.06.2017)
Published in Genome Biology (08.06.2017)
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Journal Article
Development of PCR-Based Markers to Determine the Sex of Kelps
Lipinska, Agnieszka P, Ahmed, Sophia, Peters, Akira F, Faugeron, Sylvain, Cock, J Mark, Coelho, Susana M
Published in PloS one (23.10.2015)
Published in PloS one (23.10.2015)
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Journal Article
Convergent recruitment of TALE homeodomain life cycle regulators to direct sporophyte development in land plants and brown algae
Arun, Alok, Coelho, Susana M, Peters, Akira F, Bourdareau, Simon, Pérès, Laurent, Scornet, Delphine, Strittmatter, Martina, Lipinska, Agnieszka P, Yao, Haiqin, Godfroy, Olivier, Montecinos, Gabriel J, Avia, Komlan, Macaisne, Nicolas, Troadec, Christelle, Bendahmane, Abdelhafid, Cock, J Mark
Published in eLife (15.01.2019)
Published in eLife (15.01.2019)
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Journal Article
Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history
Mazéas, Lisa, Bouguerba-Collin, Ahlem, Cock, J Mark, Denoeud, France, Godfroy, Olivier, Brillet-Guéguen, Loraine, Barbeyron, Tristan, Lipinska, Agnieszka P, Delage, Ludovic, Corre, Erwan, Drula, Elodie, Henrissat, Bernard, Czjzek, Mirjam, Terrapon, Nicolas, Hervé, Cécile
Published in BMC genomics (10.10.2024)
Published in BMC genomics (10.10.2024)
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Journal Article
Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus
Cormier, Alexandre, Avia, Komlan, Sterck, Lieven, Derrien, Thomas, Wucher, Valentin, Andres, Gwendoline, Monsoor, Misharl, Godfroy, Olivier, Lipinska, Agnieszka, Perrineau, Marie‐Mathilde, Van De Peer, Yves, Hitte, Christophe, Corre, Erwan, Coelho, Susana M., Cock, J. Mark
Published in The New phytologist (01.04.2017)
Published in The New phytologist (01.04.2017)
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Journal Article
High-density genetic map and identification of QTLs for responses to temperature and salinity stresses in the model brown alga Ectocarpus
Avia, Komlan, Coelho, Susana M., Montecinos, Gabriel J., Cormier, Alexandre, Lerck, Fiona, Mauger, Stéphane, Faugeron, Sylvain, Valero, Myriam, Cock, J. Mark, Boudry, Pierre
Published in Scientific reports (03.03.2017)
Published in Scientific reports (03.03.2017)
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Journal Article
Diversity and Evolution of Sensor Histidine Kinases in Eukaryotes
Kabbara, Samar, Hérivaux, Anaïs, Dugé de Bernonville, Thomas, Courdavault, Vincent, Clastre, Marc, Gastebois, Amandine, Osman, Marwan, Hamze, Monzer, Cock, J Mark, Schaap, Pauline, Papon, Nicolas
Published in Genome biology and evolution (01.01.2019)
Published in Genome biology and evolution (01.01.2019)
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Journal Article
The Ectocarpus IMMEDIATE UPRIGHT gene encodes a member of a novel family of cysteine-rich proteins with an unusual distribution across the eukaryotes
Macaisne, Nicolas, Liu, Fuli, Scornet, Delphine, Peters, Akira F, Lipinska, Agnieszka, Perrineau, Marie-Mathilde, Henry, Antoine, Strittmatter, Martina, Coelho, Susana M, Cock, J Mark
Published in Development (Cambridge) (01.02.2017)
Published in Development (Cambridge) (01.02.2017)
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Journal Article
Rapid turnover of life-cycle-related genes in the brown algae
Lipinska, Agnieszka P, Serrano-Serrano, Martha L, Cormier, Alexandre, Peters, Akira F, Kogame, Kazuhiro, Cock, J Mark, Coelho, Susana M
Published in Genome Biology (14.02.2019)
Published in Genome Biology (14.02.2019)
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