Computational Tools for Hydrogen–Deuterium Exchange Mass Spectrometry Data Analysis
Stofella, Michele, Grimaldi, Antonio, Smit, Jochem H., Claesen, Jürgen, Paci, Emanuele, Sobott, Frank
Published in Chemical reviews (13.11.2024)
Published in Chemical reviews (13.11.2024)
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Journal Article
Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis
Swinnen, Steve, Schaerlaekens, Kristien, Pais, Thiago, Claesen, Jürgen, Hubmann, Georg, Yang, Yudi, Demeke, Mekonnen, Foulquié-Moreno, María R, Goovaerts, Annelies, Souvereyns, Kris, Clement, Lieven, Dumortier, Françoise, Thevelein, Johan M
Published in Genome research (01.05.2012)
Published in Genome research (01.05.2012)
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MIND: A Double-Linear Model To Accurately Determine Monoisotopic Precursor Mass in High-Resolution Top-Down Proteomics
Lermyte, Frederik, Dittwald, Piotr, Claesen, Jürgen, Baggerman, Geert, Sobott, Frank, O’Connor, Peter B, Laukens, Kris, Hooyberghs, Jef, Gambin, Anna, Valkenborg, Dirk
Published in Analytical chemistry (Washington) (06.08.2019)
Published in Analytical chemistry (Washington) (06.08.2019)
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Journal Article
Fractionated irradiation of MCF7 breast cancer cells rewires a gene regulatory circuit towards a treatment‐resistant stemness phenotype
Inalegwu, Auchi, Cuypers, Bart, Claesen, Jürgen, Janssen, Ann, Coolkens, Amelie, Baatout, Sarah, Laukens, Kris, De Vos, Winnok H., Quintens, Roel
Published in Molecular oncology (01.10.2022)
Published in Molecular oncology (01.10.2022)
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Journal Article
Accurate prediction of metagenome-assembled genome completeness by MAGISTA, a random forest model built on alignment-free intra-bin statistics
Goussarov, Gleb, Claesen, Jürgen, Mysara, Mohamed, Cleenwerck, Ilse, Leys, Natalie, Vandamme, Peter, Van Houdt, Rob
Published in Environmental microbiome (05.03.2022)
Published in Environmental microbiome (05.03.2022)
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Unveiling the Molecular Mechanism of Trastuzumab Resistance in SKBR3 and BT474 Cell Lines for HER2 Positive Breast Cancer
Kokot, Anna, Gadakh, Sachin, Saha, Indrajit, Gajda, Ewa, Łaźniewski, Michał, Rakshit, Somnath, Sengupta, Kaustav, Mollah, Ayatullah Faruk, Denkiewicz, Michał, Górczak, Katarzyna, Claesen, Jürgen, Burzykowski, Tomasz, Plewczynski, Dariusz
Published in Current Issues in Molecular Biology (01.03.2024)
Published in Current Issues in Molecular Biology (01.03.2024)
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The Effects of Combined Exposure to Simulated Microgravity, Ionizing Radiation, and Cortisol on the In Vitro Wound Healing Process
Radstake, Wilhelmina E, Gautam, Kiran, Miranda, Silvana, Vermeesen, Randy, Tabury, Kevin, Rehnberg, Emil, Buset, Jasmine, Janssen, Ann, Leysen, Liselotte, Neefs, Mieke, Verslegers, Mieke, Claesen, Jürgen, van Goethem, Marc-Jan, Weber, Uli, Fournier, Claudia, Parisi, Alessio, Brandenburg, Sytze, Durante, Marco, Baselet, Bjorn, Baatout, Sarah
Published in Cells (Basel, Switzerland) (07.01.2023)
Published in Cells (Basel, Switzerland) (07.01.2023)
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Gene Expression Signature Differentiates Histology But Not Progression Status of Early-Stage NSCLC
Charkiewicz, Radoslaw, Niklinski, Jacek, Claesen, Jürgen, Sulewska, Anetta, Kozlowski, Miroslaw, Michalska-Falkowska, Anna, Reszec, Joanna, Moniuszko, Marcin, Naumnik, Wojciech, Niklinska, Wieslawa
Published in Translational oncology (01.06.2017)
Published in Translational oncology (01.06.2017)
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Simultaneous mapping of multiple gene loci with pooled segregants
Claesen, Jürgen, Clement, Lieven, Shkedy, Ziv, Foulquié-Moreno, Maria R, Burzykowski, Tomasz
Published in PloS one (18.02.2013)
Published in PloS one (18.02.2013)
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Journal Article
Deuteros 2.0: peptide-level significance testing of data from hydrogen deuterium exchange mass spectrometry
Lau, Andy M, Claesen, Jürgen, Hansen, Kjetil, Politis, Argyris
Published in Bioinformatics (19.04.2021)
Published in Bioinformatics (19.04.2021)
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Journal Article
The isotope distribution: A rose with thorns
Claesen, Jürgen, Rockwood, Alan, Gorshkov, Mikhail, Valkenborg, Dirk
Published in Mass spectrometry reviews (06.02.2023)
Published in Mass spectrometry reviews (06.02.2023)
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Journal Article
De novo prediction of the elemental composition of peptides and proteins based on a single mass
Claesen, Jürgen, Valkenborg, Dirk, Burzykowski, Tomasz
Published in Journal of mass spectrometry. (01.08.2020)
Published in Journal of mass spectrometry. (01.08.2020)
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Benchmarking short-, long- and hybrid-read assemblers for metagenome sequencing of complex microbial communities
Goussarov, Gleb, Mysara, Mohamed, Cleenwerck, Ilse, Claesen, Jürgen, Leys, Natalie, Vandamme, Peter, Van Houdt, Rob
Published in Microbiology (Society for General Microbiology) (25.06.2024)
Published in Microbiology (Society for General Microbiology) (25.06.2024)
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Journal Article
Soil microbial community structure and functionality changes in response to long‐term metal and radionuclide pollution
Rogiers, Tom, Claesen, Jürgen, Van Gompel, Axel, Vanhoudt, Nathalie, Mysara, Mohamed, Williamson, Adam, Leys, Natalie, Van Houdt, Rob, Boon, Nico, Mijnendonckx, Kristel
Published in Environmental microbiology (01.03.2021)
Published in Environmental microbiology (01.03.2021)
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