Critical review of conformational B-cell epitope prediction methods
Cia, Gabriel, Pucci, Fabrizio, Rooman, Marianne
Published in Briefings in bioinformatics (19.01.2023)
Published in Briefings in bioinformatics (19.01.2023)
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Journal Article
FiTMuSiC: leveraging structural and (co)evolutionary data for protein fitness prediction
Tsishyn, Matsvei, Cia, Gabriel, Hermans, Pauline, Kwasigroch, Jean, Rooman, Marianne, Pucci, Fabrizio
Published in Human genomics (16.04.2024)
Published in Human genomics (16.04.2024)
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Journal Article
Critical review of conformational B-cell epitope prediction methods
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Journal Article
SpikePro: a webserver to predict the fitness of SARS-CoV-2 variants
Cia, Gabriel, Kwasigroch, Jean Marc, Rooman, Marianne, Pucci, Fabrizio
Published in Bioinformatics (Oxford, England) (15.09.2022)
Published in Bioinformatics (Oxford, England) (15.09.2022)
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Journal Article
pyScoMotif: discovery of similar 3D structural motifs across proteins
Cia, Gabriel, Kwasigroch, Jean, Stamatopoulos, Basile, Rooman, Marianne, Pucci, Fabrizio
Published in Bioinformatics advances (05.01.2023)
Published in Bioinformatics advances (05.01.2023)
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Journal Article
Assessing predictions on fitness effects of missense variants in HMBS in CAGI6
Zhang, Jing, Kinch, Lisa, Katsonis, Panagiotis, Lichtarge, Olivier, Jagota, Milind, Song, Yun S, Sun, Yuanfei, Shen, Yang, Kuru, Nurdan, Dereli, Onur, Adebali, Ogun, Alladin, Muttaqi Ahmad, Pal, Debnath, Capriotti, Emidio, Turina, Maria Paola, Savojardo, Castrense, Martelli, Pier Luigi, Babbi, Giulia, Casadio, Rita, Pucci, Fabrizio, Rooman, Marianne, Cia, Gabriel, Tsishyn, Matsvei, Strokach, Alexey, Hu, Zhiqiang, van Loggerenberg, Warren, Roth, Frederick P, Radivojac, Predrag, Brenner, Steven E, Cong, Qian, Grishin, Nick V
Published in Human genetics (07.08.2024)
Published in Human genetics (07.08.2024)
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Journal Article
Critical assessment of missense variant effect predictors on disease-relevant variant data
Rastogi, Ruchir, Chung, Ryan, Li, Sindy, Li, Chang, Lee, Kyoungyeul, Woo, Junwoo, Kim, Dong-Wook, Keum, Changwon, Babbi, Giulia, Martelli, Pier Luigi, Savojardo, Castrense, Casadio, Rita, Chennen, Kirsley, Weber, Thomas, Poch, Olivier, Ancien, François, Cia, Gabriel, Pucci, Fabrizio, Raimondi, Daniele, Vranken, Wim, Rooman, Marianne, Marquet, Céline, Olenyi, Tobias, Rost, Burkhard, Andreoletti, Gaia, Kamandula, Akash, Peng, Yisu, Bakolitsa, Constantina, Mort, Matthew, Cooper, David N, Bergquist, Timothy, Pejaver, Vikas, Liu, Xiaoming, Radivojac, Predrag, Brenner, Steven E, Ioannidis, Nilah M
Published in bioRxiv : the preprint server for biology (08.06.2024)
Published in bioRxiv : the preprint server for biology (08.06.2024)
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Journal Article
Evaluation of enzyme activity predictions for variants of unknown significance in Arylsulfatase A
Jain, Shantanu, Trinidad, Marena, Nguyen, Thanh Binh, Jones, Kaiya, Neto, Santiago Diaz, Ge, Fang, Glagovsky, Ailin, Jones, Cameron, Moran, Giankaleb, Wang, Boqi, Rahimi, Kobra, Çalıcı, Sümeyra Zeynep, Cedillo, Luis R, Berardelli, Silvia, Özden, Buse, Chen, Ken, Katsonis, Panagiotis, Williams, Amanda, Lichtarge, Olivier, Rana, Sadhna, Pradhan, Swatantra, Srinivasan, Rajgopal, Sajeed, Rakshanda, Joshi, Dinesh, Faraggi, Eshel, Jernigan, Robert, Kloczkowski, Andrzej, Xu, Jierui, Song, Zigang, Özkan, Selen, Padilla, Natàlia, de la Cruz, Xavier, Acuna-Hidalgo, Rocio, Grafmüller, Andrea, Jiménez Barrón, Laura T, Manfredi, Matteo, Savojardo, Castrense, Babbi, Giulia, Martelli, Pier Luigi, Casadio, Rita, Sun, Yuanfei, Zhu, Shaowen, Shen, Yang, Pucci, Fabrizio, Rooman, Marianne, Cia, Gabriel, Raimondi, Daniele, Hermans, Pauline, Kwee, Sofia, Chen, Ella, Astore, Courtney, Kamandula, Akash, Pejaver, Vikas, Ramola, Rashika, Velyunskiy, Michelle, Zeiberg, Daniel, Mishra, Reet, Sterling, Teague, Goldstein, Jennifer L, Lugo-Martinez, Jose, Kazi, Sufyan, Li, Sindy, Long, Kinsey, Brenner, Steven E, Bakolitsa, Constantina, Radivojac, Predrag, Suhr, Dean, Suhr, Teryn, Clark, Wyatt T
Published in bioRxiv (17.06.2024)
Published in bioRxiv (17.06.2024)
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