Detection of DNA base modifications by deep recurrent neural network on Oxford Nanopore sequencing data
Liu, Qian, Fang, Li, Yu, Guoliang, Wang, Depeng, Xiao, Chuan-Le, Wang, Kai
Published in Nature communications (04.06.2019)
Published in Nature communications (04.06.2019)
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Analyzing Energy Materials by Cryogenic Electron Microscopy
Ren, Xiao‐Chuan, Zhang, Xue‐Qiang, Xu, Rui, Huang, Jia‐Qi, Zhang, Qiang
Published in Advanced materials (Weinheim) (01.06.2020)
Published in Advanced materials (Weinheim) (01.06.2020)
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Efficient assembly of nanopore reads via highly accurate and intact error correction
Chen, Ying, Nie, Fan, Xie, Shang-Qian, Zheng, Ying-Feng, Dai, Qi, Bray, Thomas, Wang, Yao-Xin, Xing, Jian-Feng, Huang, Zhi-Jian, Wang, De-Peng, He, Li-Juan, Luo, Feng, Wang, Jian-Xin, Liu, Yi-Zhi, Xiao, Chuan-Le
Published in Nature communications (04.01.2021)
Published in Nature communications (04.01.2021)
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MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads
Xiao, Chuan-Le, Chen, Ying, Xie, Shang-Qian, Chen, Kai-Ning, Wang, Yan, Han, Yue, Luo, Feng, Xie, Zhi
Published in Nature methods (01.11.2017)
Published in Nature methods (01.11.2017)
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DeepSignal: detecting DNA methylation state from Nanopore sequencing reads using deep-learning
Ni, Peng, Huang, Neng, Zhang, Zhi, Wang, De-Peng, Liang, Fan, Miao, Yu, Xiao, Chuan-Le, Luo, Feng, Wang, Jianxin
Published in Bioinformatics (01.11.2019)
Published in Bioinformatics (01.11.2019)
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Genome-wide detection of cytosine methylations in plant from Nanopore data using deep learning
Ni, Peng, Huang, Neng, Nie, Fan, Zhang, Jun, Zhang, Zhi, Wu, Bo, Bai, Lu, Liu, Wende, Xiao, Chuan-Le, Luo, Feng, Wang, Jianxin
Published in Nature communications (13.10.2021)
Published in Nature communications (13.10.2021)
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An aneurysm‐specific preconditioning technique for the acceleration of Newton‐Krylov method with application in the simulation of blood flows
Liu, Yingzhi, Qi, Fenfen, Cai, Xiao‐Chuan
Published in International journal for numerical methods in biomedical engineering (01.12.2023)
Published in International journal for numerical methods in biomedical engineering (01.12.2023)
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Simulation of unsteady blood flows in a patient‐specific compliant pulmonary artery with a highly parallel monolithically coupled fluid‐structure interaction algorithm
Kong, Fande, Kheyfets, Vitaly, Finol, Ender, Cai, Xiao‐Chuan
Published in International journal for numerical methods in biomedical engineering (01.07.2019)
Published in International journal for numerical methods in biomedical engineering (01.07.2019)
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