Algorithms to model single gene, single chromosome, and whole genome copy number changes jointly in tumor phylogenetics
Chowdhury, Salim Akhter, Shackney, Stanley E, Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schäffer, Alejandro A, Schwartz, Russell
Published in PLoS computational biology (01.07.2014)
Published in PLoS computational biology (01.07.2014)
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FISHtrees 3.0: Tumor Phylogenetics Using a Ploidy Probe
Gertz, E Michael, Chowdhury, Salim Akhter, Lee, Woei-Jyh, Wangsa, Darawalee, Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schwartz, Russell, Schäffer, Alejandro A
Published in PloS one (30.06.2016)
Published in PloS one (30.06.2016)
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Phylogenetic analysis of multiple FISH markers in oral tongue squamous cell carcinoma suggests that a diverse distribution of copy number changes is associated with poor prognosis
Wangsa, Darawalee, Chowdhury, Salim Akhter, Ryott, Michael, Gertz, E. Michael, Elmberger, Göran, Auer, Gert, Åvall Lundqvist, Elisabeth, Küffer, Stefan, Ströbel, Philipp, Schäffer, Alejandro A., Schwartz, Russell, Munck‐Wikland, Eva, Ried, Thomas, Heselmeyer‐Haddad, Kerstin
Published in International journal of cancer (01.01.2016)
Published in International journal of cancer (01.01.2016)
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Inferring models of multiscale copy number evolution for single-tumor phylogenetics
Chowdhury, Salim Akhter, Gertz, E Michael, Wangsa, Darawalee, Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schäffer, Alejandro A, Schwartz, Russell
Published in Bioinformatics (Oxford, England) (15.06.2015)
Published in Bioinformatics (Oxford, England) (15.06.2015)
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Phylogenetic analysis of multiprobe fluorescence in situ hybridization data from tumor cell populations
Chowdhury, Salim Akhter, Shackney, Stanley E, Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schäffer, Alejandro A, Schwartz, Russell
Published in Bioinformatics (01.07.2013)
Published in Bioinformatics (01.07.2013)
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Journal Article
Algorithms to Model Single Gene, Single Chromosome, and Whole Genome Copy Number Changes Jointly in Tumor Phylogenetics: e1003740
Chowdhury, Salim Akhter, Shackney, Stanley E, Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schaeffer, Alejandro A, Schwartz, Russell
Published in PLoS computational biology (01.07.2014)
Published in PLoS computational biology (01.07.2014)
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Journal Article
Phylogenetic analysis of multiple FISH markers in oral tongue squamous cell carcinoma suggests that a diverse distribution of copy number changes is associated with poor prognosis: Phylogenetic Analysis of FISH Markers in Oral Tongue Cancer
Wangsa, Darawalee, Chowdhury, Salim Akhter, Ryott, Michael, Gertz, E. Michael, Elmberger, Göran, Auer, Gert, Åvall Lundqvist, Elisabeth, Küffer, Stefan, Ströbel, Philipp, Schäffer, Alejandro A., Schwartz, Russell, Munck-Wikland, Eva, Ried, Thomas, Heselmeyer-Haddad, Kerstin
Published in International journal of cancer (01.01.2016)
Published in International journal of cancer (01.01.2016)
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Journal Article