Single-Cell Genetic Analysis of Ductal Carcinoma in Situ and Invasive Breast Cancer Reveals Enormous Tumor Heterogeneity yet Conserved Genomic Imbalances and Gain of MYC during Progression
Heselmeyer-Haddad, Kerstin, Berroa Garcia, Lissa Y, Bradley, Amanda, Ortiz-Melendez, Clarymar, Lee, Woei-Jyh, Christensen, Rebecca, Prindiville, Sheila A, Calzone, Kathleen A, Soballe, Peter W, Hu, Yue, Chowdhury, Salim A, Schwartz, Russell, Schäffer, Alejandro A, Ried, Thomas
Published in The American journal of pathology (01.11.2012)
Published in The American journal of pathology (01.11.2012)
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Journal Article
Network signatures of survival in glioblastoma multiforme
Patel, Vishal N, Gokulrangan, Giridharan, Chowdhury, Salim A, Chen, Yanwen, Sloan, Andrew E, Koyutürk, Mehmet, Barnholtz-Sloan, Jill, Chance, Mark R
Published in PLoS computational biology (01.09.2013)
Published in PLoS computational biology (01.09.2013)
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Journal Article
Single-Cell Genetic Analysis Reveals Insights into Clonal Development of Prostate Cancers and Indicates Loss of PTEN as a Marker of Poor Prognosis
Heselmeyer-Haddad, Kerstin M, Berroa Garcia, Lissa Y, Bradley, Amanda, Hernandez, Leanora, Hu, Yue, Habermann, Jens K, Dumke, Christoph, Thorns, Christoph, Perner, Sven, Pestova, Ekaterina, Burke, Catherine, Chowdhury, Salim A, Schwartz, Russell, Schäffer, Alejandro A, Paris, Pamela L, Ried, Thomas
Published in The American journal of pathology (01.10.2014)
Published in The American journal of pathology (01.10.2014)
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Journal Article
Subnetwork state functions define dysregulated subnetworks in cancer
Chowdhury, Salim A, Nibbe, Rod K, Chance, Mark R, Koyutürk, Mehmet
Published in Journal of computational biology (01.03.2011)
Published in Journal of computational biology (01.03.2011)
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Journal Article
Systems biology analyses of gene expression and genome wide association study data in obstructive sleep apnea
Liu, Yu, Patel, Sanjay, Nibbe, Rod, Maxwell, Sean, Chowdhury, Salim A, Koyuturk, Mehmet, Zhu, Xiaofeng, Larkin, Emma K, Buxbaum, Sarah G, Punjabi, Naresh M, Gharib, Sina A, Redline, Susan, Chance, Mark R
Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2011)
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Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2011)
Journal Article
Identifying stage-specific protein subnetworks for colorectal cancer
Erten, Sinan, Chowdhury, Salim A, Guan, Xiaowei, Nibbe, Rod K, Barnholtz-Sloan, Jill S, Chance, Mark R, Koyutürk, Mehmet
Published in BMC proceedings (13.11.2012)
Published in BMC proceedings (13.11.2012)
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Journal Article
Abstract 2182: Reconstructing evolutionary models of tumor progression from single-cell heterogeneity data
Chowdhury, Salim A., Gertz, E. Michael, Wangsa, Darawalee, Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schaeffer, Alejandro, Schwartz, Russell
Published in Cancer research (Chicago, Ill.) (01.08.2015)
Published in Cancer research (Chicago, Ill.) (01.08.2015)
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Journal Article
Abstract 5338: Inferring evolutionary models of tumor progression from single-cell heterogeneity data
Chowdhury, Salim A., Subramanian, Ayshwarya, Schäffer, Alejandro A., Shackney, Stanley E., Wangsa, Darawalee, Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schwartz, Russell
Published in Cancer research (Chicago, Ill.) (01.10.2014)
Published in Cancer research (Chicago, Ill.) (01.10.2014)
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Journal Article
Abstract 4833: Single-cell genetic analysis reveals insights into clonal development of cervical cancer and confirms TERC as an early and dominant aberration
Hernandez, Leanora S., Bradley, Amanda, Gaiser, Timo, Andersson, Sonia, Gertz, E. Michael, Chowdhury, Salim A., Schwartz, Russel, Schäffer, Alejandro, Heselmeyer-Haddad, Kerstin, Ried, Thomas
Published in Cancer research (Chicago, Ill.) (01.08.2015)
Published in Cancer research (Chicago, Ill.) (01.08.2015)
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Journal Article
Abstract 2895: Phylogenetic models of tumor progression from fluorescence in situ hybridization (FISH) data on many single cells of a solid tumor
Chowdhury, Salim A., Schäffer, Alejandro A., Shackney, Stanley E., Wangsa, Darawalee, Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schwartz, Russell
Published in Cancer research (Chicago, Ill.) (15.04.2013)
Published in Cancer research (Chicago, Ill.) (15.04.2013)
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