Application of next generation sequencing in clinical microbiology and infection prevention
Deurenberg, Ruud H., Bathoorn, Erik, Chlebowicz, Monika A., Couto, Natacha, Ferdous, Mithila, García-Cobos, Silvia, Kooistra-Smid, Anna M.D., Raangs, Erwin C., Rosema, Sigrid, Veloo, Alida C.M., Zhou, Kai, Friedrich, Alexander W., Rossen, John W.A.
Published in Journal of biotechnology (10.02.2017)
Published in Journal of biotechnology (10.02.2017)
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Core/Whole Genome Multilocus Sequence Typing and Core Genome SNP-Based Typing of OXA-48-Producing Klebsiella pneumoniae Clinical Isolates From Spain
Miro, Elisenda, Rossen, John W A, Chlebowicz, Monika A, Harmsen, Dag, Brisse, Sylvain, Passet, Virginie, Navarro, Ferran, Friedrich, Alex W, García-Cobos, S
Published in Frontiers in microbiology (31.01.2020)
Published in Frontiers in microbiology (31.01.2020)
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Evolutionary dynamics of methicillin-resistant Staphylococcus aureus within a healthcare system
Hsu, Li-Yang, Harris, Simon R, Chlebowicz, Monika A, Lindsay, Jodi A, Koh, Tse-Hsien, Krishnan, Prabha, Tan, Thean-Yen, Hon, Pei-Yun, Grubb, Warren B, Bentley, Stephen D, Parkhill, Julian, Peacock, Sharon J, Holden, Matthew T G
Published in Genome Biology (23.04.2015)
Published in Genome Biology (23.04.2015)
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Expansion of KPC-producing Klebsiella pneumoniae with various mgrB mutations giving rise to colistin resistance: the role of ISL3 on plasmids
Giordano, Cesira, Barnini, Simona, Tsioutis, Constantinos, Chlebowicz, Monika A., Scoulica, Effie V., Gikas, Achilleas, Rossen, John W., Friedrich, Alexander W., Bathoorn, Erik
Published in International journal of antimicrobial agents (01.02.2018)
Published in International journal of antimicrobial agents (01.02.2018)
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Journal Article
Revealing the Virulence Potential of Clinical and Environmental Aspergillus fumigatus Isolates Using Whole-Genome Sequencing
Puértolas-Balint, Fabiola, Rossen, John W. A., Oliveira dos Santos, Claudy, Chlebowicz, Monika M. A., Raangs, Erwin C., van Putten, Maarten L., Sola-Campoy, Pedro J., Han, Li, Schmidt, Martina, García-Cobos, Silvia
Published in Frontiers in microbiology (04.09.2019)
Published in Frontiers in microbiology (04.09.2019)
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Journal Article
Whole genome sequencing characterization of Slovenian carbapenem-resistant Klebsiella pneumoniae, including OXA-48 and NDM-1 producing outbreak isolates
Benulič, Katarina, Pirš, Mateja, Couto, Natacha, Chlebowicz, Monika, Rossen, John W A, Zorec, Tomaž Mark, Seme, Katja, Poljak, Mario, Lejko Zupanc, Tatjana, Ružić-Sabljić, Eva, Cerar, Tjaša
Published in PloS one (13.04.2020)
Published in PloS one (13.04.2020)
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Proteomics uncovers extreme heterogeneity in the Staphylococcus aureus exoproteome due to genomic plasticity and variant gene regulation
Ziebandt, Anne-Kathrin, Kusch, Harald, Degner, Marco, Jaglitz, Sarah, Sibbald, Mark J.J.B, Arends, Jan P, Chlebowicz, Monika A, Albrecht, Dirk, Pantuček, Roman, Doškar, Jiri, Ziebuhr, Wilma, Bröker, Barbara M, Hecker, Michael, van Dijl, Jan Maarten, Engelmann, Susanne
Published in Proteomics (Weinheim) (01.04.2010)
Published in Proteomics (Weinheim) (01.04.2010)
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Journal Article
Detection of a novel mcr-5.4 gene variant in hospital tap water by shotgun metagenomic sequencing
Fleres, Giuseppe, Couto, Natacha, Schuele, Leonard, Chlebowicz, Monika A, Mendes, Catarina I, van der Sluis, Luc W M, Rossen, John W A, Friedrich, Alex W, García-Cobos, Silvia
Published in Journal of antimicrobial chemotherapy (01.12.2019)
Published in Journal of antimicrobial chemotherapy (01.12.2019)
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Journal Article
Antibiotic Resistance Plasmids Cointegrated into a Megaplasmid Harboring the bla OXA-427 Carbapenemase Gene
Desmet, Stefanie, Nepal, Suruchi, van Dijl, Jan Maarten, Van Ranst, Marc, Chlebowicz, Monika A, Rossen, John W, Van Houdt, Jeroen K J, Maes, Piet, Lagrou, Katrien, Bathoorn, Erik
Published in Antimicrobial agents and chemotherapy (01.03.2018)
Published in Antimicrobial agents and chemotherapy (01.03.2018)
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Journal Article
Comprehensive Molecular Characterization of Escherichia coli Isolates from Urine Samples of Hospitalized Patients in Rio de Janeiro, Brazil
Campos, Ana Carolina C, Andrade, Nathália L, Ferdous, Mithila, Chlebowicz, Monika A, Santos, Carla C, Correal, Julio C D, Lo Ten Foe, Jerome R, Rosa, Ana Cláudia P, Damasco, Paulo V, Friedrich, Alex W, Rossen, John W A
Published in Frontiers in microbiology (16.02.2018)
Published in Frontiers in microbiology (16.02.2018)
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Journal Article
Long-read sequencing-based in silico phage typing of vancomycin-resistant Enterococcus faecium
Lisotto, Paola, Raangs, Erwin C, Couto, Natacha, Rosema, Sigrid, Lokate, Mariëtte, Zhou, Xuewei, Friedrich, Alexander W, Rossen, John W. A, Harmsen, Hermie J. M, Bathoorn, Erik, Chlebowicz-Fliss, Monika A
Published in BMC genomics (23.10.2021)
Published in BMC genomics (23.10.2021)
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Journal Article
Molecular Characterisation of Vancomycin-Resistant Enterococcus faecium Isolates Belonging to the Lineage ST117/CT24 Causing Hospital Outbreaks
Lisotto, Paola, Couto, Natacha, Rosema, Sigrid, Lokate, Mariëtte, Zhou, Xuewei, Bathoorn, Erik, Harmsen, Hermie J. M., Friedrich, Alexander W., Rossen, John W. A., Chlebowicz-Fliss, Monika A.
Published in Frontiers in microbiology (27.09.2021)
Published in Frontiers in microbiology (27.09.2021)
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Journal Article
Requirement of the agr Locus for Colony Spreading of Staphylococcus aureus
TSOMPANIDOU, Eleni, SIBBALD, Mark J. J. B, CHLEBOWICZ, Monika A, DREISBACH, Annette, WILLEM BACK, Jaap, MAARTEN VAN DIJL, Jan, BUIST, Girbe, DENHAM, Emma L
Published in Journal of Bacteriology (01.03.2011)
Published in Journal of Bacteriology (01.03.2011)
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Journal Article
Molecular Characterization of Staphylococcus aureus Isolates Transmitted between Patients with Buruli Ulcer
Amissah, Nana Ama, Chlebowicz, Monika A, Ablordey, Anthony, Sabat, Artur J, Tetteh, Caitlin S, Prah, Isaac, van der Werf, Tjip S, Friedrich, Alex W, van Dijl, Jan Maarten, Rossen, John W, Stienstra, Ymkje
Published in PLoS neglected tropical diseases (01.09.2015)
Published in PLoS neglected tropical diseases (01.09.2015)
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Journal Article
Virulence potential of Staphylococcus aureus isolates from Buruli ulcer patients
Amissah, Nana Ama, Chlebowicz, Monika A, Ablordey, Anthony, Tetteh, Caitlin S, Prah, Isaac, van der werf, Tjip S, Friedrich, Alex W, van Dijl, Jan Maarten, Stienstra, Ymkje, Rossen, John W
Published in International journal of medical microbiology (01.06.2017)
Published in International journal of medical microbiology (01.06.2017)
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There's no place like OM: Vesicular sorting and secretion of the peptidylarginine deiminase of Porphyromonas gingivalis
Gabarrini, Giorgio, Palma Medina, Laura M., Stobernack, Tim, Prins, Rianne C., du Teil Espina, Marines, Kuipers, Jeroen, Chlebowicz, Monika A., Rossen, John W. A., van Winkelhoff, Arie Jan, van Dijl, Jan Maarten
Published in Virulence (01.01.2018)
Published in Virulence (01.01.2018)
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Journal Article
Corrigendum: Comprehensive Molecular Characterization of Escherichia coli Isolates from Urine Samples of Hospitalized Patients in Rio de Janeiro, Brazil
Campos, Ana Carolina C., Andrade, Nathália L., Ferdous, Mithila, Chlebowicz, Monika A., Santos, Carla C., Correal, Julio C. D., Lo Ten Foe, Jerome R., Rosa, Ana Cláudia P., Damasco, Paulo V., Friedrich, Alex W., Rossen, John W. A.
Published in Frontiers in microbiology (30.10.2020)
Published in Frontiers in microbiology (30.10.2020)
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Journal Article
Virulence and resistance properties of E. coli isolated from urine samples of hospitalized patients in Rio de Janeiro, Brazil – The role of mobile genetic elements
da Cruz Campos, Ana Carolina, Couto, Natacha, Lucas da Silva Andrade, Nathália, Friedrich, Alex W., de Paula Rosa, Ana Cláudia, Vieira Damasco, Paulo, Chlebowicz-Fliss, Monika A., Rossen, John W.A.
Published in International journal of medical microbiology (01.12.2020)
Published in International journal of medical microbiology (01.12.2020)
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Journal Article
From the wound to the bench: exoproteome interplay between wound-colonizing Staphylococcus aureus strains and co-existing bacteria
García-Pérez, Andrea N., de Jong, Anne, Junker, Sabryna, Becher, Dörte, Chlebowicz, Monika A., Duipmans, José C., Jonkman, Marcel F., van Dijl, Jan Maarten
Published in Virulence (01.01.2018)
Published in Virulence (01.01.2018)
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Journal Article
The Staphylococcal Cassette Chromosome mec type V from Staphylococcus aureus ST398 is packaged into bacteriophage capsids
Chlebowicz, Monika A, Mašlaňová, Ivana, Kuntová, Lucie, Grundmann, Hajo, Pantůček, Roman, Doškař, Jiří, van Dijl, Jan Maarten, Buist, Girbe
Published in International journal of medical microbiology (01.07.2014)
Published in International journal of medical microbiology (01.07.2014)
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