Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas
Moncada, Reuben, Barkley, Dalia, Wagner, Florian, Chiodin, Marta, Devlin, Joseph C., Baron, Maayan, Hajdu, Cristina H., Simeone, Diane M., Yanai, Itai
Published in Nature biotechnology (01.03.2020)
Published in Nature biotechnology (01.03.2020)
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Widespread Transcriptional Scanning in the Testis Modulates Gene Evolution Rates
Xia, Bo, Yan, Yun, Baron, Maayan, Wagner, Florian, Barkley, Dalia, Chiodin, Marta, Kim, Sang Y., Keefe, David L., Alukal, Joseph P., Boeke, Jef D., Yanai, Itai
Published in Cell (23.01.2020)
Published in Cell (23.01.2020)
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Mitigating Anticipated Effects of Systematic Errors Supports Sister-Group Relationship between Xenacoelomorpha and Ambulacraria
Philippe, Hervé, Poustka, Albert J., Chiodin, Marta, Hoff, Katharina J., Dessimoz, Christophe, Tomiczek, Bartlomiej, Schiffer, Philipp H., Müller, Steven, Domman, Daryl, Horn, Matthias, Kuhl, Heiner, Timmermann, Bernd, Satoh, Noriyuki, Hikosaka-Katayama, Tomoe, Nakano, Hiroaki, Rowe, Matthew L., Elphick, Maurice R., Thomas-Chollier, Morgane, Hankeln, Thomas, Mertes, Florian, Wallberg, Andreas, Rast, Jonathan P., Copley, Richard R., Martinez, Pedro, Telford, Maximilian J.
Published in Current biology (03.06.2019)
Published in Current biology (03.06.2019)
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Author Correction: Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas
Moncada, Reuben, Barkley, Dalia, Wagner, Florian, Chiodin, Marta, Devlin, Joseph C., Baron, Maayan, Hajdu, Cristina H., Simeone, Diane M., Yanai, Itai
Published in Nature biotechnology (01.12.2020)
Published in Nature biotechnology (01.12.2020)
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Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa)
Ohdera, Aki, Ames, Cheryl L, Dikow, Rebecca B, Kayal, Ehsan, Chiodin, Marta, Busby, Ben, La, Sean, Pirro, Stacy, Collins, Allen G, Medina, Mónica, Ryan, Joseph F
Published in Gigascience (01.07.2019)
Published in Gigascience (01.07.2019)
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The nervous system of Xenacoelomorpha: a genomic perspective
Perea-Atienza, Elena, Gavilán, Brenda, Chiodin, Marta, Abril, Josep F, Hoff, Katharina J, Poustka, Albert J, Martinez, Pedro
Published in Journal of experimental biology (15.02.2015)
Published in Journal of experimental biology (15.02.2015)
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Steps towards a centralized nervous system in basal bilaterians: Insights from neurogenesis of the acoel Symsagittifera roscoffensis
Semmler, Henrike, Chiodin, Marta, Bailly, Xavier, Martinez, Pedro, Wanninger, Andreas
Published in Development, growth & differentiation (01.10.2010)
Published in Development, growth & differentiation (01.10.2010)
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Mesodermal gene expression in the acoel Isodiametra pulchra indicates a low number of mesodermal cell types and the endomesodermal origin of the gonads
Chiodin, Marta, Børve, Aina, Berezikov, Eugene, Ladurner, Peter, Martinez, Pedro, Hejnol, Andreas
Published in PloS one (06.02.2013)
Published in PloS one (06.02.2013)
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Cellular adaptation to cancer therapy along a resistance continuum
França, Gustavo S., Baron, Maayan, King, Benjamin R., Bossowski, Jozef P., Bjornberg, Alicia, Pour, Maayan, Rao, Anjali, Patel, Ayushi S., Misirlioglu, Selim, Barkley, Dalia, Tang, Kwan Ho, Dolgalev, Igor, Liberman, Deborah A., Avital, Gal, Kuperwaser, Felicia, Chiodin, Marta, Levine, Douglas A., Papagiannakopoulos, Thales, Marusyk, Andriy, Lionnet, Timothée, Yanai, Itai
Published in Nature (London) (25.07.2024)
Published in Nature (London) (25.07.2024)
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Integrating single-cell RNA-Seq with spatial transcriptomics in pancreatic ductal adenocarcinoma using multimodal intersection analysis
Moncada, Reuben, Wagner, Florian, Chiodin, Marta, Devlin, Joseph C, Baron, Maayan, Hajdu, Cristina H, Simeone, Diane M, Yanai, Itai
Published in bioRxiv (13.03.2019)
Published in bioRxiv (13.03.2019)
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