Longitudinal single-cell RNA sequencing of patient-derived primary cells reveals drug-induced infidelity in stem cell hierarchy
Sharma, Ankur, Cao, Elaine Yiqun, Kumar, Vibhor, Zhang, Xiaoqian, Leong, Hui Sun, Wong, Angeline Mei Lin, Ramakrishnan, Neeraja, Hakimullah, Muhammad, Teo, Hui Min Vivian, Chong, Fui Teen, Chia, Shumei, Thangavelu, Matan Thangavelu, Kwang, Xue Lin, Gupta, Ruta, Clark, Jonathan R, Periyasamy, Giridharan, Iyer, N Gopalakrishna, DasGupta, Ramanuj
Published in Nature communications (22.11.2018)
Published in Nature communications (22.11.2018)
Get full text
Journal Article
Predicting heterogeneity in clone-specific therapeutic vulnerabilities using single-cell transcriptomic signatures
Suphavilai, Chayaporn, Chia, Shumei, Sharma, Ankur, Tu, Lorna, Da Silva, Rafael Peres, Mongia, Aanchal, DasGupta, Ramanuj, Nagarajan, Niranjan
Published in Genome medicine (16.12.2021)
Published in Genome medicine (16.12.2021)
Get full text
Journal Article
Phenotype-driven precision oncology as a guide for clinical decisions one patient at a time
Chia, Shumei, Low, Joo-Leng, Zhang, Xiaoqian, Kwang, Xue-Lin, Chong, Fui-Teen, Sharma, Ankur, Bertrand, Denis, Toh, Shen Yon, Leong, Hui-Sun, Thangavelu, Matan T, Hwang, Jacqueline S G, Lim, Kok-Hing, Skanthakumar, Thakshayeni, Tan, Hiang-Khoon, Su, Yan, Hui Choo, Siang, Hentze, Hannes, Tan, Iain B H, Lezhava, Alexander, Tan, Patrick, Tan, Daniel S W, Periyasamy, Giridharan, Koh, Judice L Y, Gopalakrishna Iyer, N, DasGupta, Ramanuj
Published in Nature communications (05.09.2017)
Published in Nature communications (05.09.2017)
Get full text
Journal Article
An AI‐assisted integrated, scalable, single‐cell phenomic‐transcriptomic platform to elucidate intratumor heterogeneity against immune response
Tostado, Christopher P., Da Ong, Lucas Xian, Heng, Joel Jia Wei, Miccolis, Carlo, Chia, Shumei, Seow, Justine Jia Wen, Toh, Yi‐Chin, DasGupta, Ramanuj
Published in Bioengineering & translational medicine (01.03.2024)
Published in Bioengineering & translational medicine (01.03.2024)
Get full text
Journal Article
A comparative study of tumour-on-chip models with patient-derived xenografts for predicting chemotherapy efficacy in colorectal cancer patients
Ong, Louis Jun Ye, Chia, Shumei, Wong, Stephen Qi Rong, Zhang, Xiaoqian, Chua, Huiwen, Loo, Jia Min, Chua, Wei Yong, Chua, Clarinda, Tan, Emile, Hentze, Hannes, Tan, Iain Beehuat, DasGupta, Ramanuj, Toh, Yi-Chin
Published in Frontiers in bioengineering and biotechnology (16.08.2022)
Published in Frontiers in bioengineering and biotechnology (16.08.2022)
Get full text
Journal Article
Single-cell analysis of EphA clustering phenotypes to probe cancer cell heterogeneity
Ravasio, Andrea, Myaing, Myint Z, Chia, Shumei, Arora, Aditya, Sathe, Aneesh, Cao, Elaine Yiqun, Bertocchi, Cristina, Sharma, Ankur, Arasi, Bakya, Chung, Vin Yee, Greene, Adrienne C, Tan, Tuan Zea, Chen, Zhongwen, Ong, Hui Ting, Iyer, N Gopalakrishna, Huang, Ruby YunJu, DasGupta, Ramanuj, Groves, Jay T, Viasnoff, Virgile
Published in Communications biology (06.08.2020)
Published in Communications biology (06.08.2020)
Get full text
Journal Article
Author Correction: Single-cell analysis of EphA clustering phenotypes to probe cancer cell heterogeneity
Ravasio, Andrea, Myaing, Myint Z, Chia, Shumei, Arora, Aditya, Sathe, Aneesh, Cao, Elaine Yiqun, Bertocchi, Cristina, Sharma, Ankur, Arasi, Bakya, Chung, Vin Yee, Greene, Adrienne C, Tan, Tuan Zea, Chen, Zhongwen, Ong, Hui Ting, Iyer, N Gopalakrishna, Huang, Ruby YunJu, DasGupta, Ramanuj, Groves, Jay T, Viasnoff, Virgile
Published in Communications biology (06.11.2020)
Published in Communications biology (06.11.2020)
Get full text
Journal Article
Author Correction: Single-cell analysis of EphA clustering phenotypes to probe cancer cell heterogeneity
Ravasio, Andrea, Myaing, Myint Z, Chia, Shumei, Arora, Aditya, Sathe, Aneesh, Cao, Elaine Yiqun, Bertocchi, Cristina, Sharma, Ankur, Arasi, Bakya, Chung, Vin Yee, Green, Adrianne C, Tan, Tuan Zea, Chen, Zhongwen, Ong, Hui Ting, Iyer, N Gopalakrishna, Huang, Ruby YunJu, DasGupta, Ramanuj, Groves, Jay T, Viasnoff, Virgile
Published in Communications biology (07.09.2020)
Published in Communications biology (07.09.2020)
Get full text
Journal Article
Single-cell and bulk transcriptome sequencing identifies two epithelial tumor cell states and refines the consensus molecular classification of colorectal cancer
Joanito, Ignasius, Wirapati, Pratyaksha, Zhao, Nancy, Nawaz, Zahid, Yeo, Grace, Lee, Fiona, Eng, Christine L. P., Macalinao, Dominique Camat, Kahraman, Merve, Srinivasan, Harini, Lakshmanan, Vairavan, Verbandt, Sara, Tsantoulis, Petros, Gunn, Nicole, Venkatesh, Prasanna Nori, Poh, Zhong Wee, Nahar, Rahul, Oh, Hsueh Ling Janice, Loo, Jia Min, Chia, Shumei, Cheow, Lih Feng, Cheruba, Elsie, Wong, Michael Thomas, Kua, Lindsay, Chua, Clarinda, Nguyen, Andy, Golovan, Justin, Gan, Anna, Lim, Wan-Jun, Guo, Yu Amanda, Yap, Choon Kong, Tay, Brenda, Hong, Yourae, Chong, Dawn Qingqing, Chok, Aik-Yong, Park, Woong-Yang, Han, Shuting, Chang, Mei Huan, Seow-En, Isaac, Fu, Cherylin, Mathew, Ronnie, Toh, Ee-Lin, Hong, Lewis Z., Skanderup, Anders Jacobsen, DasGupta, Ramanuj, Ong, Chin-Ann Johnny, Lim, Kiat Hon, Tan, Emile K. W., Koo, Si-Lin, Leow, Wei Qiang, Tejpar, Sabine, Prabhakar, Shyam, Tan, Iain Beehuat
Published in Nature genetics (01.07.2022)
Published in Nature genetics (01.07.2022)
Get full text
Journal Article
Evolution of precision oncology-guided treatment paradigms
DasGupta, Ramanuj, Yap, Aixin, Yaqing, Elena Yong, Chia, Shumei
Published in Wiley interdisciplinary reviews. Mechanisms of disease (01.01.2023)
Published in Wiley interdisciplinary reviews. Mechanisms of disease (01.01.2023)
Get more information
Journal Article
Two high-yield complementary methods to sort cell populations by their 2D or 3D migration speed
Arora, Aditya, Niño, Jorge Luis Galeano, Myaing, Myint Zu, Chia, Shumei, Arasi, Bakya, Ravasio, Andrea, Huang, Ruby Yun-Ju, Dasgupta, Ramanuj, Biro, Maté, Viasnoff, Virgile
Published in Molecular biology of the cell (01.12.2020)
Published in Molecular biology of the cell (01.12.2020)
Get full text
Journal Article
Iron-(Fe3+)-Dependent Reactivation of Telomerase Drives Colorectal Cancers
Shanmugam, Raghuvaran, Majee, Prativa, Shi, Wei, Ozturk, Mert B., Vaiyapuri, Thamil S., Idzham, Khaireen, Raju, Anandhkumar, Shin, Seung H., Fidan, Kerem, Low, Joo-Leng, Chua, Joelle Y.H., Kong, Yap C., Qi, Ong Y., Tan, Emile, Chok, Aik Y., Seow-En, Isaac, Wee, Ian, Macalinao, Dominique C., Chong, Dawn Q., Chang, Hong Y., Lee, Fiona, Leow, Wei Q., Murata-Hori, Maki, Xiaoqian, Zhang, Shumei, Chia, Tan, Chris S.H., Dasgupta, Ramanuj, Tan, Iain B., Tergaonkar, Vinay
Published in Cancer discovery (24.07.2024)
Published in Cancer discovery (24.07.2024)
Get full text
Journal Article
Ex vivo co-culture models for immunotherapy with patient-derived tumor infiltrating lymphocytes, peripheral blood mononuclear cells and autologous patient colorectal cancer (CRC) cell lines
Tan, Si Qi, Lee, Yunqin, Lee, Fiona Yi Xin, Wang, Who-Whong, Bok, Ke Xin, Kua, Lindsay, Lim, Wan Jun, Teo, Hui Min (Vivian), Chia, Shumei, Loo, Jia Min, Yeo, Eugene Shen Ann, Tan, Wah Siew, Toh, Ee-Lin, Chua, Clarinda, Koo, Si-Lin, Toh, Yi-Chin, Biswas, Subhra Kumar, Toh, Han Chong, Dasgupta, Ramanuj, Tan, Iain Beehuat
Published in Journal of clinical oncology (20.05.2018)
Published in Journal of clinical oncology (20.05.2018)
Get full text
Journal Article
Single-cell RNA-seq unveils divergent modes of chemoresistance in squamous cell carcinoma
Sharma, Ankur, Kumar, Vibhor, Cao, Elaine Yiqun, Leong, Hui Sun, Hakimullah, Muhammad, Ramakrishnan, Neeraja, Zhang, Xiaoqian, Chong, Fui Teen, Chia, Shumei, Thangavelu, Matan Thangavelu, Wong, Angeline Mei Lin, Kwang, Xue Lin, Tan, Daniel Shao-Weng, Periyasamy, Giridharan, Gopalakrishna Iyer, N., DasGupta, Ramanuj
Published in Mechanisms of development (01.07.2017)
Published in Mechanisms of development (01.07.2017)
Get full text
Journal Article
Predicting heterogeneity in clone-specific therapeutic vulnerabilities using single-cell transcriptomic signatures
Suphavilai, Chayaporn, Chia, Shumei, Sharma, Ankur, Tu, Lorna, Rafael Peres Da Silva, Mongia, Aanchal, Dasgupta, Ramanuj, Nagarajan, Niranjan
Published in bioRxiv (24.11.2020)
Published in bioRxiv (24.11.2020)
Get full text
Paper
Single-cell analysis of EphA clustering phenotypes to probe cancer cell heterogeneity
Ravasio, Andrea, Myint Zu Myaing, Chia, Shumei, Arora, Aditya, Sathe, Aneesh, Cao, Elaine Yiqun, Bertocchi, Cristina, Sharma, Ankur, Arasi, Bakya, Chung, Vin Yee, Green, Adrianne C, Tuan Zea Tan, Chen, Zhongwen, Ong, Hui Ting, N Gopalakrishna Iyer, Huang, Ruby Yunju, Dasgupta, Ramanuj, Groves, Jay T, Viasnoff, Virgile
Published in bioRxiv (10.05.2019)
Published in bioRxiv (10.05.2019)
Get full text
Paper