Comparing phenotypic variation between inbred and outbred mice
Tuttle, Alexander H., Philip, Vivek M., Chesler, Elissa J., Mogil, Jeffrey S.
Published in Nature methods (01.12.2018)
Published in Nature methods (01.12.2018)
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Journal Article
High-Diversity Mouse Populations for Complex Traits
Saul, Michael C., Philip, Vivek M., Reinholdt, Laura G., Chesler, Elissa J.
Published in Trends in genetics (01.07.2019)
Published in Trends in genetics (01.07.2019)
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Journal Article
Reproducibility and replicability of rodent phenotyping in preclinical studies
Kafkafi, Neri, Agassi, Joseph, Chesler, Elissa J., Crabbe, John C., Crusio, Wim E., Eilam, David, Gerlai, Robert, Golani, Ilan, Gomez-Marin, Alex, Heller, Ruth, Iraqi, Fuad, Jaljuli, Iman, Karp, Natasha A., Morgan, Hugh, Nicholson, George, Pfaff, Donald W., Richter, S. Helene, Stark, Philip B., Stiedl, Oliver, Stodden, Victoria, Tarantino, Lisa M., Tucci, Valter, Valdar, William, Williams, Robert W., Würbel, Hanno, Benjamini, Yoav
Published in Neuroscience and biobehavioral reviews (01.04.2018)
Published in Neuroscience and biobehavioral reviews (01.04.2018)
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Journal Article
Host genetic control of gut microbiome composition
Bubier, Jason A., Chesler, Elissa J., Weinstock, George M.
Published in Mammalian genome (01.08.2021)
Published in Mammalian genome (01.08.2021)
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Journal Article
High-resolution genetic mapping using the Mouse Diversity outbred population
Svenson, Karen L, Gatti, Daniel M, Valdar, William, Welsh, Catherine E, Cheng, Riyan, Chesler, Elissa J, Palmer, Abraham A, McMillan, Leonard, Churchill, Gary A
Published in Genetics (Austin) (01.02.2012)
Published in Genetics (Austin) (01.02.2012)
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Journal Article
A multi-lab experimental assessment reveals that replicability can be improved by using empirical estimates of genotype-by-lab interaction
Jaljuli, Iman, Kafkafi, Neri, Giladi, Eliezer, Golani, Ilan, Gozes, Illana, Chesler, Elissa J, Bogue, Molly A, Benjamini, Yoav
Published in PLoS biology (01.05.2023)
Published in PLoS biology (01.05.2023)
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Journal Article
On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types
Zhang, Yun, Phillips, Charles A, Rogers, Gary L, Baker, Erich J, Chesler, Elissa J, Langston, Michael A
Published in BMC bioinformatics (15.04.2014)
Published in BMC bioinformatics (15.04.2014)
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Journal Article
Large-scale discovery of mouse transgenic integration sites reveals frequent structural variation and insertional mutagenesis
Goodwin, Leslie O, Splinter, Erik, Davis, Tiffany L, Urban, Rachel, He, Hao, Braun, Robert E, Chesler, Elissa J, Kumar, Vivek, van Min, Max, Ndukum, Juliet, Philip, Vivek M, Reinholdt, Laura G, Svenson, Karen, White, Jacqueline K, Sasner, Michael, Lutz, Cathleen, Murray, Stephen A
Published in Genome research (01.03.2019)
Published in Genome research (01.03.2019)
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Journal Article
The Genetics of Neuropathic Pain from Model Organisms to Clinical Application
Calvo, Margarita, Davies, Alexander J., Hébert, Harry L., Weir, Greg A., Chesler, Elissa J., Finnerup, Nanna B., Levitt, Roy C., Smith, Blair H., Neely, G. Gregory, Costigan, Michael, Bennett, David L.
Published in Neuron (Cambridge, Mass.) (20.11.2019)
Published in Neuron (Cambridge, Mass.) (20.11.2019)
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Journal Article
Mouse Phenome Database: towards a more FAIR-compliant and TRUST-worthy data repository and tool suite for phenotypes and genotypes
Bogue, Molly A, Ball, Robyn L, Philip, Vivek M, Walton, David O, Dunn, Matthew H, Kolishovski, Georgi, Lamoureux, Anna, Gerring, Matthew, Liang, Hongping, Emerson, Jake, Stearns, Tim, He, Hao, Mukherjee, Gaurab, Bluis, John, Desai, Sejal, Sundberg, Beth, Kadakkuzha, Beena, Kunde-Ramamoorthy, Govindarajan, Chesler, Elissa J
Published in Nucleic acids research (06.01.2023)
Published in Nucleic acids research (06.01.2023)
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Journal Article
Cisplatin-resistant triple-negative breast cancer subtypes: multiple mechanisms of resistance
Hill, David P, Harper, Akeena, Malcolm, Joan, McAndrews, Monica S, Mockus, Susan M, Patterson, Sara E, Reynolds, Timothy, Baker, Erich J, Bult, Carol J, Chesler, Elissa J, Blake, Judith A
Published in BMC cancer (04.11.2019)
Published in BMC cancer (04.11.2019)
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Journal Article
Collaborative Cross and Diversity Outbred data resources in the Mouse Phenome Database
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Journal Article
Book Review
Host genetic and environmental effects on mouse intestinal microbiota
Campbell, James H, Foster, Carmen M, Vishnivetskaya, Tatiana, Campbell, Alisha G, Yang, Zamin K, Wymore, Ann, Palumbo, Anthony V, Chesler, Elissa J, Podar, Mircea
Published in The ISME Journal (01.11.2012)
Published in The ISME Journal (01.11.2012)
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Journal Article
Mouse Phenome Database: a data repository and analysis suite for curated primary mouse phenotype data
Bogue, Molly A, Philip, Vivek M, Walton, David O, Grubb, Stephen C, Dunn, Matthew H, Kolishovski, Georgi, Emerson, Jake, Mukherjee, Gaurab, Stearns, Timothy, He, Hao, Sinha, Vinita, Kadakkuzha, Beena, Kunde-Ramamoorthy, Govindarajan, Chesler, Elissa J
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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Journal Article
Mechanistic Differences in Neuropathic Pain Modalities Revealed by Correlating Behavior with Global Expression Profiling
Cobos, Enrique J., Nickerson, Chelsea A., Gao, Fuying, Chandran, Vijayendran, Bravo-Caparrós, Inmaculada, González-Cano, Rafael, Riva, Priscilla, Andrews, Nick A., Latremoliere, Alban, Seehus, Corey R., Perazzoli, Gloria, Nieto, Francisco R., Joller, Nicole, Painter, Michio W., Ma, Chi Him Eddie, Omura, Takao, Chesler, Elissa J., Geschwind, Daniel H., Coppola, Giovanni, Rangachari, Manu, Woolf, Clifford J., Costigan, Michael
Published in Cell reports (Cambridge) (30.01.2018)
Published in Cell reports (Cambridge) (30.01.2018)
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Journal Article
Enhlink infers distal and context-specific enhancer-promoter linkages
Poirion, Olivier B, Zuo, Wulin, Spruce, Catrina, Baker, Candice N, Daigle, Sandra L, Olson, Ashley, Skelly, Daniel A, Chesler, Elissa J, Baker, Christopher L, White, Brian S
Published in Genome Biology (02.09.2024)
Published in Genome Biology (02.09.2024)
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Journal Article
Heritability of ethanol consumption and pharmacokinetics in a genetically diverse panel of collaborative cross mouse strains and their inbred founders
Bagley, Jared R., Chesler, Elissa J., Philip, Vivek M., Jentsch, James D.
Published in Alcoholism, clinical and experimental research (01.04.2021)
Published in Alcoholism, clinical and experimental research (01.04.2021)
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Journal Article
Improving the predictive power of mouse models
Pera, Martin, Greene, Andy, Cardon, Lon, Carter, Gregory W., Chesler, Elissa J., Churchill, Gary, Kumar, Vivek, Lutz, Cathleen, Munger, Steven, Murray, Steve, O’Connell, Kristen, Reinholdt, Laura, Rosenthal, Nadia A.
Published in Nature biotechnology (01.08.2024)
Published in Nature biotechnology (01.08.2024)
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Journal Article
Mouse Phenome Database: an integrative database and analysis suite for curated empirical phenotype data from laboratory mice
Bogue, Molly A, Grubb, Stephen C, Walton, David O, Philip, Vivek M, Kolishovski, Georgi, Stearns, Tim, Dunn, Matthew H, Skelly, Daniel A, Kadakkuzha, Beena, TeHennepe, Gregg, Kunde-Ramamoorthy, Govindarajan, Chesler, Elissa J
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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