MEF2D Drives Photoreceptor Development through a Genome-wide Competition for Tissue-Specific Enhancers
Andzelm, Milena M., Cherry, Timothy J., Harmin, David A., Boeke, Annabel C., Lee, Charlotte, Hemberg, Martin, Pawlyk, Basil, Malik, Athar N., Flavell, Steven W., Sandberg, Michael A., Raviola, Elio, Greenberg, Michael E.
Published in Neuron (Cambridge, Mass.) (08.04.2015)
Published in Neuron (Cambridge, Mass.) (08.04.2015)
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Gene regulatory networks controlling temporal patterning, neurogenesis, and cell-fate specification in mammalian retina
Lyu, Pin, Hoang, Thanh, Santiago, Clayton P., Thomas, Eric D., Timms, Andrew E., Appel, Haley, Gimmen, Megan, Le, Nguyet, Jiang, Lizhi, Kim, Dong Won, Chen, Siqi, Espinoza, David F., Telger, Ariel E., Weir, Kurt, Clark, Brian S., Cherry, Timothy J., Qian, Jiang, Blackshaw, Seth
Published in Cell reports (Cambridge) (16.11.2021)
Published in Cell reports (Cambridge) (16.11.2021)
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Mapping the cis-regulatory architecture of the human retina reveals noncoding genetic variation in disease
Cherry, Timothy J., Yang, Marty G., Harmin, David A., Tao, Peter, Timms, Andrew E., Bauwens, Miriam, Allikmets, Rando, Jones, Evan M., Chen, Rui, De Baere, Elfride, Greenberg, Michael E.
Published in Proceedings of the National Academy of Sciences - PNAS (21.04.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (21.04.2020)
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Cell-specific cis-regulatory elements and mechanisms of non-coding genetic disease in human retina and retinal organoids
Thomas, Eric D., Timms, Andrew E., Giles, Sarah, Harkins-Perry, Sarah, Lyu, Pin, Hoang, Thanh, Qian, Jiang, Jackson, Victoria E., Bahlo, Melanie, Blackshaw, Seth, Friedlander, Martin, Eade, Kevin, Cherry, Timothy J.
Published in Developmental cell (28.03.2022)
Published in Developmental cell (28.03.2022)
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ABCA4-associated disease as a model for missing heritability in autosomal recessive disorders: novel noncoding splice, cis-regulatory, structural, and recurrent hypomorphic variants
Bauwens, Miriam, Garanto, Alejandro, Sangermano, Riccardo, Naessens, Sarah, Weisschuh, Nicole, De Zaeytijd, Julie, Khan, Mubeen, Sadler, Françoise, Balikova, Irina, Van Cauwenbergh, Caroline, Rosseel, Toon, Bauwens, Jim, De Leeneer, Kim, De Jaegere, Sarah, Van Laethem, Thalia, De Vries, Meindert, Carss, Keren, Arno, Gavin, Fakin, Ana, Webster, Andrew R., de Ravel de l’Argentière, Thomy J. L., Sznajer, Yves, Vuylsteke, Marnik, Kohl, Susanne, Wissinger, Bernd, Cherry, Timothy, Collin, Rob W. J., Cremers, Frans P. M., Leroy, Bart P., De Baere, Elfride
Published in Genetics in medicine (01.08.2019)
Published in Genetics in medicine (01.08.2019)
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NeuroD factors regulate cell fate and neurite stratification in the developing retina
Cherry, Timothy J, Wang, Sui, Bormuth, Ingo, Schwab, Markus, Olson, James, Cepko, Constance L
Published in The Journal of neuroscience (18.05.2011)
Published in The Journal of neuroscience (18.05.2011)
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Two novel non-coding single nucleotide variants in the DNase1 hypersensitivity site of PRDM13 causing North Carolina macular dystrophy in Korea
Seo, Yuri, Joo, Kwangsic, Lee, Junwon, Diaz, Amber, Jang, Sohyun, Cherry, Timothy J, Bujakowska, Kinga M, Han, Jinu, Woo, Se Joon, Small, Kent W
Published in Molecular vision (19.02.2024)
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Published in Molecular vision (19.02.2024)
Journal Article
Chromatin Environment and Cellular Context Specify Compensatory Activity of Paralogous MEF2 Transcription Factors
Majidi, Shahriyar P., Reddy, Naveen C., Moore, Michael J., Chen, Hao, Yamada, Tomoko, Andzelm, Milena M., Cherry, Timothy J., Hu, Linda S., Greenberg, Michael E., Bonni, Azad
Published in Cell reports (Cambridge) (12.11.2019)
Published in Cell reports (Cambridge) (12.11.2019)
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Journal Article
Contribution of noncoding pathogenic variants to RPGRIP1-mediated inherited retinal degeneration
Jamshidi, Farzad, Place, Emily M., Mehrotra, Sudeep, Navarro-Gomez, Daniel, Maher, Mathew, Branham, Kari E., Valkanas, Elise, Cherry, Timothy J., Lek, Monkol, MacArthur, Daniel, Pierce, Eric A., Bujakowska, Kinga M.
Published in Genetics in medicine (01.03.2019)
Published in Genetics in medicine (01.03.2019)
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Journal Article
Mapping the genomic landscape of inherited retinal disease genes prioritizes genes prone to coding and noncoding copy-number variations
Van Schil, Kristof, Naessens, Sarah, Van de Sompele, Stijn, Carron, Marjolein, Aslanidis, Alexander, Van Cauwenbergh, Caroline, Mayer, Anja K, Van Heetvelde, Mattias, Bauwens, Miriam, Verdin, Hannah, Coppieters, Frauke, Greenberg, Michael E, Yang, Marty G, Karlstetter, Marcus, Langmann, Thomas, De Preter, Katleen, Kohl, Susanne, Cherry, Timothy J, Leroy, Bart P, De Baere, Elfride
Published in Genetics in medicine (01.02.2018)
Published in Genetics in medicine (01.02.2018)
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Journal Article
Early Asymmetry of Gene Transcription in Embryonic Human Left and Right Cerebral Cortex
Sun, Tao, Patoine, Christina, Abu-Khalil, Amir, Visvader, Jane, Sum, Eleanor, Cherry, Timothy J, Orkin, Stuart H, Geschwind, Daniel H, Walsh, Christopher A
Published in Science (American Association for the Advancement of Science) (17.06.2005)
Published in Science (American Association for the Advancement of Science) (17.06.2005)
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Lipid Nanoparticle-Mediated Delivery of mRNA Into the Mouse and Human Retina and Other Ocular Tissues
Chambers, Cheri Z, Soo, Gillian L, Engel, Abbi L, Glass, Ian A, Frassetto, Andrea, Martini, Paolo G V, Cherry, Timothy J
Published in Translational vision science & technology (01.07.2024)
Published in Translational vision science & technology (01.07.2024)
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Journal Article
Machine Learning Prediction of Non-Coding Variant Impact in Human Retinal cis-Regulatory Elements
VandenBosch, Leah S, Luu, Kelsey, Timms, Andrew E, Challam, Shriya, Wu, Yue, Lee, Aaron Y, Cherry, Timothy J
Published in Translational vision science & technology (01.04.2022)
Published in Translational vision science & technology (01.04.2022)
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Journal Article
Correction: Mapping the genomic landscape of inherited retinal disease genes prioritizes genes prone to coding and noncoding copy-number variations
Van Schil, Kristof, Naessens, Sarah, Van de Sompele, Stijn, Carron, Marjolein, Aslanidis, Alexander, Van Cauwenbergh, Caroline, Mayer, Anja K., Van Heetvelde, Mattias, Bauwens, Miriam, Verdin, Hannah, Coppieters, Frauke, Greenberg, Michael E., Yang, Marty G., Karlstetter, Marcus, Langmann, Thomas, De Preter, Katleen, Kohl, Susanne, Cherry, Timothy J., Leroy, Bart P., De Baere, Elfride
Published in Genetics in medicine (01.08.2019)
Published in Genetics in medicine (01.08.2019)
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Journal Article
Etiological heterogeneity of familial periventricular heterotopia and hydrocephalus
Sheen, Volney L, Basel-Vanagaite, Lina, Goodman, Jean R, Scheffer, Ingrid E, Bodell, Adria, Ganesh, Vijay S, Ravenscroft, Robert, Hill, Robert S, Cherry, Timothy J, Shugart, Yin Y, Barkovich, James, Straussberg, Rachel, Walsh, Christopher A
Published in Brain & development (Tokyo. 1979) (01.08.2004)
Published in Brain & development (Tokyo. 1979) (01.08.2004)
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