Gene expression based inference of cancer drug sensitivity
Chawla, Smriti, Rockstroh, Anja, Lehman, Melanie, Ratther, Ellca, Jain, Atishay, Anand, Anuneet, Gupta, Apoorva, Bhattacharya, Namrata, Poonia, Sarita, Rai, Priyadarshini, Das, Nirjhar, Majumdar, Angshul, Jayadeva, Ahuja, Gaurav, Hollier, Brett G., Nelson, Colleen C., Sengupta, Debarka
Published in Nature communications (27.09.2022)
Published in Nature communications (27.09.2022)
Get full text
Journal Article
Molecular signature comprising 11 platelet-genes enables accurate blood-based diagnosis of NSCLC
Goswami, Chitrita, Chawla, Smriti, Thakral, Deepshi, Pant, Himanshu, Verma, Pramod, Malik, Prabhat Singh, Jayadeva, Gupta, Ritu, Ahuja, Gaurav, Sengupta, Debarka
Published in BMC genomics (27.10.2020)
Published in BMC genomics (27.10.2020)
Get full text
Journal Article
Correction to: Molecular signature comprising 11 platelet-genes enables accurate blood-based diagnosis of NSCLC
Goswami, Chitrita, Chawla, Smriti, Thakral, Deepshi, Pant, Himanshu, Verma, Pramod, Malik, Prabhat Singh, Jayadeva, Gupta, Ritu, Ahuja, Gaurav, Sengupta, Debarka
Published in BMC genomics (08.12.2020)
Published in BMC genomics (08.12.2020)
Get full text
Journal Article
Microfluidic live tracking and transcriptomics of cancer-immune cell doublets link intercellular proximity and gene regulation
Flores, Bianca C. T., Chawla, Smriti, Ma, Ning, Sanada, Chad, Kujur, Praveen Kumar, Yeung, Rudy, Bellon, Margot B., Hukari, Kyle, Fowler, Brian, Lynch, Mark, Chinen, Ludmilla T. D., Ramalingam, Naveen, Sengupta, Debarka, Jeffrey, Stefanie S.
Published in Communications biology (12.11.2022)
Published in Communications biology (12.11.2022)
Get full text
Journal Article
UniPath: a uniform approach for pathway and gene-set based analysis of heterogeneity in single-cell epigenome and transcriptome profiles
Chawla, Smriti, Samydurai, Sudhagar, Kong, Say Li, Wu, Zhengwei, Wang, Zhenxun, TAM, Wai Leong, Sengupta, Debarka, Kumar, Vibhor
Published in Nucleic acids research (22.02.2021)
Published in Nucleic acids research (22.02.2021)
Get full text
Journal Article
Literature mining discerns latent disease–gene relationships
Rai, Priyadarshini, Jain, Atishay, Kumar, Shivani, Sharma, Divya, Jha, Neha, Chawla, Smriti, Raj, Abhijit, Gupta, Apoorva, Poonia, Sarita, Majumdar, Angshul, Chakraborty, Tanmoy, Ahuja, Gaurav, Sengupta, Debarka
Published in Bioinformatics (Oxford, England) (29.03.2024)
Published in Bioinformatics (Oxford, England) (29.03.2024)
Get full text
Journal Article
Associating pathways with diseases using single-cell expression profiles and making inferences about potential drugs
Sharma, Madhu, Jha, Indra Prakash, Chawla, Smriti, Pandey, Neetesh, Chandra, Omkar, Mishra, Shreya, Kumar, Vibhor
Published in Briefings in bioinformatics (18.07.2022)
Published in Briefings in bioinformatics (18.07.2022)
Get full text
Journal Article
Matching queried single-cell open-chromatin profiles to large pools of single-cell transcriptomes and epigenomes for reference supported analysis
Mishra, Shreya, Pandey, Neetesh, Chawla, Smriti, Sharma, Madhu, Chandra, Omkar, Jha, Indra Prakash, SenGupta, Debarka, Natarajan, Kedar Nath, Kumar, Vibhor
Published in Genome research (01.02.2023)
Published in Genome research (01.02.2023)
Get full text
Journal Article
Economic Impact and Challenges in Waste Management
Rajadurai, M, Chawla, Smriti, Satheesh, M Amarnath
Published in Journal of pharmaceutical sciences and research (01.03.2021)
Get full text
Published in Journal of pharmaceutical sciences and research (01.03.2021)
Journal Article
Algorithm Visualization: Bridging the Gap between Theory and Practice
Chawla, Smriti
Published in International journal for research in applied science and engineering technology (30.06.2024)
Published in International journal for research in applied science and engineering technology (30.06.2024)
Get full text
Journal Article
Marker-free characterization of full-length transcriptomes of single live circulating tumor cells
Poonia, Sarita, Goel, Anurag, Chawla, Smriti, Bhattacharya, Namrata, Rai, Priyadarshini, Lee, Yi Fang, Yap, Yoon Sim, West, Jay, Bhagat, Ali Asgar, Tayal, Juhi, Mehta, Anurag, Ahuja, Gaurav, Majumdar, Angshul, Ramalingam, Naveen, Sengupta, Debarka
Published in Genome research (01.01.2023)
Published in Genome research (01.01.2023)
Get full text
Journal Article
Marker-free characterization of full-length transcriptomes of single live circulating tumor cells
Poonia, Sarita, Goel, Anurag, Chawla, Smriti, Bhattacharya, Namrata, Rai, Priyadarshini, Lee, Yi Fang, Yap, Yoon Sim, West, Jay, Bhagat, Ali Asgar, Tayal, Juhi, Mehta, Anurag, Ahuja, Gaurav, Majumdar, Angshul, Ramalingam, Naveen, Sengupta, Debarka
Published in Genome research (01.01.2023)
Published in Genome research (01.01.2023)
Get full text
Journal Article
UniPath: a uniform approach for pathway and gene-set based analysis of heterogeneity in single-cell epigenome and transcriptome profiles
Chawla, Smriti, Samydurai, Sudhagar, Kong, Say Li, Wu, Zhengwei, Wang, Zhenxun, Tam, Wai Leong, Sengupta, Debarka, Kumar, Vibhor
Published in Nucleic acids research (22.02.2021)
Published in Nucleic acids research (22.02.2021)
Get full text
Journal Article
UniPath: A uniform approach for pathway and gene-set based analysis of heterogeneity in single-cell epigenome and transcriptome profiles
Chawla, Smriti, Samydurai, Sudhagar, Say Li Kong, Wang, Zhenxun, Wai Leong Tam, Sengupta, Debarka, Kumar, Vibhor
Published in bioRxiv (24.03.2020)
Published in bioRxiv (24.03.2020)
Get full text
Paper
Latent representation of single-cell transcriptomes enables algebraic operations on cellular phenotypes
Sengupta, Debarka, Nelson, Colleen C, Bhattacharya, Namrata, Rockstroh, Anja, Roquilly, Antoine, Hollier, Brett, Ahuja, Gaurav, Kumar, Himanshu, Poschmann, Jeremie, Lehman, Melanie, Sam Koshy Thomas, Deshpande, Sanket Suhas, Chawla, Smriti, Solomon, Pierre, Fourgeux, Cynthia
Published in bioRxiv (30.12.2022)
Published in bioRxiv (30.12.2022)
Get full text
Paper
Marker–free characterization of single live circulating tumor cell full–length transcriptomes
Poonia, Sarita, Goel, Anurag, Chawla, Smriti, Bhattacharya, Namrata, Rai, Priyadarshini, Yi Fang Lee, Yoon Sim Yap, West, Jay, Ali Asgar Bhagat, Tayal, Juhi Juhi, Mehta, Anurag, Ahuja, Gaurav, Majumdar, Angshul, Ramalingam, Naveen, Sengupta, Debarka
Published in bioRxiv (19.11.2021)
Published in bioRxiv (19.11.2021)
Get full text
Paper
Gene expression based inference of drug resistance in cancer
Chawla, Smriti, Rockstroh, Anja, Lehman, Melanie, Rather, Ellca, Jain, Atishay, Anuneet Anand, Gupta, Apoorva, Bhattacharya, Namrata, Poonia, Sarita, Rai, Priyadarshini, Das, Nirjhar, Majumdar, Angshul, Jayadeva, Jayadeva, Ahuja, Gaurav, Hollier, Brett G, Nelson, Colleen C, Sengupta, Debarka
Published in bioRxiv (19.11.2021)
Published in bioRxiv (19.11.2021)
Get full text
Paper