Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection
Garcia-Ruiz, Hernan, Takeda, Atsushi, Chapman, Elisabeth J, Sullivan, Christopher M, Fahlgren, Noah, Brempelis, Katherine J, Carrington, James C
Published in The Plant cell (01.02.2010)
Published in The Plant cell (01.02.2010)
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Journal Article
Hypocotyl transcriptome reveals auxin regulation of growth-promoting genes through GA-dependent and -independent pathways
Chapman, Elisabeth J, Greenham, Kathleen, Castillejo, Cristina, Sartor, Ryan, Bialy, Agniezska, Sun, Tai-Ping, Estelle, Mark
Published in PloS one (09.05.2012)
Published in PloS one (09.05.2012)
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Journal Article
High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes
Fahlgren, Noah, Howell, Miya D, Kasschau, Kristin D, Chapman, Elisabeth J, Sullivan, Christopher M, Cumbie, Jason S, Givan, Scott A, Law, Theresa F, Grant, Sarah R, Dangl, Jeffery L, Carrington, James C
Published in PloS one (14.02.2007)
Published in PloS one (14.02.2007)
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Journal Article
Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids
Ha, Misook, Lu, Jie, Tian, Lu, Ramachandran, Vanitharani, Kasschau, Kristin D, Chapman, Elisabeth J, Carrington, James C, Chen, Xuemei, Wang, Xiu-Jie, Chen, Z. Jeffrey
Published in Proceedings of the National Academy of Sciences - PNAS (20.10.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (20.10.2009)
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Journal Article
Specificity of ARGONAUTE7-miR390 Interaction and Dual Functionality in TAS3 Trans-Acting siRNA Formation
Montgomery, Taiowa A., Howell, Miya D., Cuperus, Josh T., Li, Dawei, Hansen, Jesse E., Alexander, Amanda L., Chapman, Elisabeth J., Fahlgren, Noah, Allen, Edwards, Carrington, James C.
Published in Cell (04.04.2008)
Published in Cell (04.04.2008)
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Journal Article
MicroRNA Gene Evolution in Arabidopsis lyrata and Arabidopsis thaliana
Fahlgren, Noah, Jogdeo, Sanjuro, Kasschau, Kristin D, Sullivan, Christopher M, Chapman, Elisabeth J, Laubinger, Sascha, Smith, Lisa M, Dasenko, Mark, Givan, Scott A, Weigel, Detlef, Carrington, James C
Published in The Plant cell (01.04.2010)
Published in The Plant cell (01.04.2010)
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Journal Article
Genome-wide profiling and analysis of Arabidopsis siRNAs
Kasschau, Kristin D, Fahlgren, Noah, Chapman, Elisabeth J, Sullivan, Christopher M, Cumbie, Jason S, Givan, Scott A, Carrington, James C
Published in PLoS biology (01.03.2007)
Published in PLoS biology (01.03.2007)
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Journal Article
Small RNA binding is a common strategy to suppress RNA silencing by several viral suppressors
Lakatos, L, Csorba, T, Pantaleo, V, Chapman, E.J, Carrington, J.C, Liu, Y.P, Dolja, V.V, Fernández Calvino, L, López-Moya, J.J, Burgyán, J
Published in The EMBO journal (21.06.2006)
Published in The EMBO journal (21.06.2006)
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Journal Article
Phytophthora Have Distinct Endogenous Small RNA Populations That Include Short Interfering and microRNAs
Fahlgren, Noah, Bollmann, Stephanie R, Kasschau, Kristin D, Cuperus, Josh T, Press, Caroline M, Sullivan, Christopher M, Chapman, Elisabeth J, Hoyer, J. Steen, Gilbert, Kerrigan B, Grünwald, Niklaus J, Carrington, James C, Margis, Rogerio
Published in PloS one (21.10.2013)
Published in PloS one (21.10.2013)
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Journal Article
Computational and analytical framework for small RNA profiling by high-throughput sequencing
Fahlgren, Noah, Sullivan, Christopher M, Kasschau, Kristin D, Chapman, Elisabeth J, Cumbie, Jason S, Montgomery, Taiowa A, Gilbert, Sunny D, Dasenko, Mark, Backman, Tyler W H, Givan, Scott A, Carrington, James C
Published in RNA (Cambridge) (01.05.2009)
Published in RNA (Cambridge) (01.05.2009)
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Journal Article
Genome-Wide Analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 Pathway in Arabidopsis Reveals Dependency on miRNA- and tasiRNA-Directed Targeting
Howell, Miya D, Fahlgren, Noah, Chapman, Elisabeth J, Cumbie, Jason S, Sullivan, Christopher M, Givan, Scott A, Kasschau, Kristin D, Carrington, James C
Published in The Plant cell (01.03.2007)
Published in The Plant cell (01.03.2007)
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Journal Article
microRNA regulation of fruit growth
José Ripoll, Juan, Bailey, Lindsay J, Mai, Quynh-Anh, Wu, Scott L, Hon, Cindy T, Chapman, Elisabeth J, Ditta, Gary S, Estelle, Mark, Yanofsky, Martin F
Published in Nature plants (30.03.2015)
Published in Nature plants (30.03.2015)
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Journal Article
Transgenically expressed viral RNA silencing suppressors interfere with microRNA methylation in Arabidopsis
Yu, Bin, Chapman, Elisabeth J., Yang, Zhiyong, Carrington, James C., Chen, Xuemei
Published in FEBS letters (29.05.2006)
Published in FEBS letters (29.05.2006)
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Journal Article
Update of ASRP: the Arabidopsis Small RNA Project database
Backman, Tyler W.H, Sullivan, Christopher M, Cumbie, Jason S, Miller, Zachary A, Chapman, Elisabeth J, Fahlgren, Noah, Givan, Scott A, Carrington, James C, Kasschau, Kristin D
Published in Nucleic acids research (01.01.2008)
Published in Nucleic acids research (01.01.2008)
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Journal Article
Diverse suppressors of RNA silencing enhance agroinfection by a viral replicon
Chiba, Marin, Reed, Jonathan C., Prokhnevsky, Alexey I., Chapman, Elisabeth J., Mawassi, Munir, Koonin, Eugene V., Carrington, James C., Dolja, Valerian V.
Published in Virology (New York, N.Y.) (01.03.2006)
Published in Virology (New York, N.Y.) (01.03.2006)
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Journal Article
Soil properties associated with organic matter-mediated suppression of bean root rot in field soil amended with fresh and composted paper mill residuals
Rotenberg, Dorith, Wells, Ana Jiménez, Chapman, Elisabeth J., Whitfield, Anna E., Goodman, Robert M., Cooperband, Leslie R.
Published in Soil biology & biochemistry (01.11.2007)
Published in Soil biology & biochemistry (01.11.2007)
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