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Genomic Maps of Long Noncoding RNA Occupancy Reveal Principles of RNA-Chromatin Interactions
Chu, Ci, Qu, Kun, Zhong, Franklin L., Artandi, Steven E., Chang, Howard Y.
Published in Molecular cell (18.11.2011)
Published in Molecular cell (18.11.2011)
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ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis
Granja, Jeffrey M., Corces, M. Ryan, Pierce, Sarah E., Bagdatli, S. Tansu, Choudhry, Hani, Chang, Howard Y., Greenleaf, William J.
Published in Nature genetics (01.03.2021)
Published in Nature genetics (01.03.2021)
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Systematic Discovery of Xist RNA Binding Proteins
Chu, Ci, Zhang, Qiangfeng Cliff, da Rocha, Simão Teixeira, Flynn, Ryan A., Bharadwaj, Maheetha, Calabrese, J. Mauro, Magnuson, Terry, Heard, Edith, Chang, Howard Y.
Published in Cell (09.04.2015)
Published in Cell (09.04.2015)
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Atlas of Subcellular RNA Localization Revealed by APEX-Seq
Fazal, Furqan M., Han, Shuo, Parker, Kevin R., Kaewsapsak, Pornchai, Xu, Jin, Boettiger, Alistair N., Chang, Howard Y., Ting, Alice Y.
Published in Cell (11.07.2019)
Published in Cell (11.07.2019)
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Engineering circular RNA for enhanced protein production
Chen, Robert, Wang, Sean K., Belk, Julia A., Amaya, Laura, Li, Zhijian, Cardenas, Angel, Abe, Brian T., Chen, Chun-Kan, Wender, Paul A., Chang, Howard Y.
Published in Nature biotechnology (01.02.2023)
Published in Nature biotechnology (01.02.2023)
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Extrachromosomal DNA: An Emerging Hallmark in Human Cancer
Wu, Sihan, Bafna, Vineet, Chang, Howard Y, Mischel, Paul S
Published in Annual review of pathology (24.01.2022)
Published in Annual review of pathology (24.01.2022)
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HiChIP: efficient and sensitive analysis of protein-directed genome architecture
Mumbach, Maxwell R, Rubin, Adam J, Flynn, Ryan A, Dai, Chao, Khavari, Paul A, Greenleaf, William J, Chang, Howard Y
Published in Nature methods (01.11.2016)
Published in Nature methods (01.11.2016)
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Chromatin and gene-regulatory dynamics of the developing human cerebral cortex at single-cell resolution
Trevino, Alexandro E., Müller, Fabian, Andersen, Jimena, Sundaram, Laksshman, Kathiria, Arwa, Shcherbina, Anna, Farh, Kyle, Chang, Howard Y., Pașca, Anca M., Kundaje, Anshul, Pașca, Sergiu P., Greenleaf, William J.
Published in Cell (16.09.2021)
Published in Cell (16.09.2021)
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Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
Buenrostro, Jason D, Giresi, Paul G, Zaba, Lisa C, Chang, Howard Y, Greenleaf, William J
Published in Nature methods (01.12.2013)
Published in Nature methods (01.12.2013)
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Long Intergenic Noncoding RNAs: New Links in Cancer Progression
Tsai, Miao-Chih, Spitale, Robert C., Chang, Howard Y.
Published in Cancer research (Chicago, Ill.) (01.01.2011)
Published in Cancer research (Chicago, Ill.) (01.01.2011)
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