Comparison between 16S rRNA and shotgun sequencing data for the taxonomic characterization of the gut microbiota
Durazzi, Francesco, Sala, Claudia, Castellani, Gastone, Manfreda, Gerardo, Remondini, Daniel, De Cesare, Alessandra
Published in Scientific reports (04.02.2021)
Published in Scientific reports (04.02.2021)
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Journal Article
Listeria monocytogenes Sequence Types 121 and 14 Repeatedly Isolated Within One Year of Sampling in a Rabbit Meat Processing Plant: Persistence and Ecophysiology
Pasquali, Frédérique, Palma, Federica, Guillier, Laurent, Lucchi, Alex, De Cesare, Alessandra, Manfreda, Gerardo
Published in Frontiers in microbiology (29.03.2018)
Published in Frontiers in microbiology (29.03.2018)
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Journal Article
A multi-omics approach to elucidate the mechanisms of action of a dietary muramidase administered to broiler chickens
Brugaletta, Giorgio, De Cesare, Alessandra, Laghi, Luca, Manfreda, Gerardo, Zampiga, Marco, Oliveri, Chiara, Pérez-Calvo, Estefanía, Litta, Gilberto, Lolli, Susanna, Sirri, Federico
Published in Scientific reports (01.04.2022)
Published in Scientific reports (01.04.2022)
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Journal Article
Salmonella control in poultry flocks and its public health impact
Koutsoumanis, Kostas, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Dewulf, Jeroen, Hald, Tine, Michel, Virginie, Niskanen, Taina, Ricci, Antonia, Snary, Emma, Boelaert, Frank, Messens, Winy, Davies, Robert
Published in EFSA journal (01.02.2019)
Published in EFSA journal (01.02.2019)
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Journal Article
Whole genome sequencing for typing and characterisation of Listeria monocytogenes isolated in a rabbit meat processing plant
Palma, Federica, Pasquali, Frédérique, Lucchi, Alex, De Cesare, Alessandra, Manfreda, Gerardo
Published in Italian journal of food safety (28.09.2017)
Published in Italian journal of food safety (28.09.2017)
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Journal Article
BSE risk posed by ruminant collagen and gelatine derived from bones
Koutsoumanis, Konstantinos, Allende, Ana, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Adkin, Amie, Andreoletti, Olivier, Griffin, John, Lanfranchi, Barbara, Ortiz‐Pelaez, Angel, Ordonez, Avelino Alvarez
Published in EFSA journal (01.07.2024)
Published in EFSA journal (01.07.2024)
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Journal Article
Evaluation of alternative methods of tunnel composting (submitted by the European Composting Network) II
Koutsoumanis, Konstantinos, Allende, Ana, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Skandamis, Panagiotis, Ru, Giuseppe, Simmons, Marion, De Cesare, Alessandra, Escamez, Pablo Fernandez, Suffredini, Elisabetta, Ortiz‐Pelaez, Angel, Ordonez, Avelino Alvarez
Published in EFSA journal (01.04.2024)
Published in EFSA journal (01.04.2024)
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Journal Article
Application of shotgun metagenomics to smoked salmon experimentally spiked: Comparison between sequencing and microbiological data using different bioinformatic approaches
Cesare, Alessandra De, Oliveri, Chiara, Lucchi, Alex, Pasquali, Frederique, Manfreda, Gerardo
Published in Italian journal of food safety (05.12.2019)
Published in Italian journal of food safety (05.12.2019)
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Journal Article
Whole genome sequencing based typing and characterisation of Shiga-toxin producing Escherichia coli strains belonging to O157 and O26 serotypes and isolated in dairy farms
Pasquali, Frederique, Palma, Federica, Trevisani, Marcello, Parisi, Antonio, Lucchi, Alex, Cesare, Alessandra De, Manfreda, Gerardo
Published in Italian journal of food safety (31.12.2018)
Published in Italian journal of food safety (31.12.2018)
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Journal Article
Microbiota analysis and microbiological hazard assessment in poultry carcasses from conventional and antibiotic free farms
Cesare, Alessandra De, Parisi, Antonio, Lucchi, Alex, Capozzi, Loredana, Bianco, Angela, Pasquali, Frederique, Manfreda, Gerardo
Published in Italian journal of food safety (31.12.2018)
Published in Italian journal of food safety (31.12.2018)
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Journal Article
Effect of dietary supplementation with Lactobacillus acidophilus D2/CSL (CECT 4529) on caecum microbioma and productive performance in broiler chickens
De Cesare, Alessandra, Sirri, Federico, Manfreda, Gerardo, Moniaci, Paola, Giardini, Alberto, Zampiga, Marco, Meluzzi, Adele
Published in PloS one (04.05.2017)
Published in PloS one (04.05.2017)
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Journal Article
Evaluation of an alternative method for production of biodiesel from processed fats derived from Category 1, 2 and 3 animal by‐products (submitted by College Proteins)
Koutsoumanis, Konstantinos, Allende, Ana, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Andréoletti, Olivier, Escámez, Pablo Fernández, Griffin, John, Spiropoulos, John, Ashe, Sean, Ortiz‐Peláez, Angel, Alvarez‐Ordóñez, Avelino
Published in EFSA journal (01.04.2020)
Published in EFSA journal (01.04.2020)
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Journal Article
Effect of Lactobacillus acidophilus D2/CSL (CECT 4529) supplementation in drinking water on chicken crop and caeca microbiome
De Cesare, Alessandra, Sala, Claudia, Castellani, Gastone, Astolfi, Annalisa, Indio, Valentina, Giardini, Alberto, Manfreda, Gerardo
Published in PloS one (01.01.2020)
Published in PloS one (01.01.2020)
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Journal Article
Systematic review on microbiome-related nutritional interventions interfering with the colonization of foodborne pathogens in broiler gut to prevent contamination of poultry meat
Mekonnen, Yitagele Terefe, Savini, Federica, Indio, Valentina, Seguino, Alessandro, Giacometti, Federica, Serraino, Andrea, Candela, Marco, De Cesare, Alessandra
Published in Poultry science (01.05.2024)
Published in Poultry science (01.05.2024)
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Journal Article
Scientific Opinion on the update of the list of QPS‐recommended biological agents intentionally added to food or feed as notified to EFSA (2017–2019)
Koutsoumanis, Kostas, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Maradona, Miguel Prieto, Querol, Amparo, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barizzone, Fulvio, Correia, Sandra, Herman, Lieve
Published in EFSA journal (01.02.2020)
Published in EFSA journal (01.02.2020)
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Journal Article
Genomic features of Klebsiella isolates from artisanal ready-to-eat food production facilities
Crippa, Cecilia, Pasquali, Frédérique, Rodrigues, Carla, De Cesare, Alessandra, Lucchi, Alex, Gambi, Lucia, Manfreda, Gerardo, Brisse, Sylvain, Palma, Federica
Published in Scientific reports (06.07.2023)
Published in Scientific reports (06.07.2023)
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Journal Article
Research note: The resistome of commensal Escherichia coli isolated from broiler carcasses “produced without the use of antibiotics”a
Gambi, Lucia, Crippa, Cecilia, Lucchi, Alex, De Cesare, Alessandra, Parisi, Antonio, Manfreda, Gerardo, Pasquali, Frédérique
Published in Poultry science (01.04.2022)
Published in Poultry science (01.04.2022)
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Journal Article
Pathogenicity assessment of Shiga toxin‐producing Escherichia coli (STEC) and the public health risk posed by contamination of food with STEC
Koutsoumanis, Kostas, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bover‐Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Jenkins, Claire, Monteiro Pires, Sara, Morabito, Stefano, Niskanen, Taina, Scheutz, Flemming, da Silva Felício, Maria Teresa, Messens, Winy, Bolton, Declan
Published in EFSA journal (01.01.2020)
Published in EFSA journal (01.01.2020)
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