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Tubular cell and keratinocyte single-cell transcriptomics applied to lupus nephritis reveal type I IFN and fibrosis relevant pathways
Der, Evan, Suryawanshi, Hemant, Morozov, Pavel, Kustagi, Manjunath, Goilav, Beatrice, Ranabothu, Saritha, Izmirly, Peter, Clancy, Robert, Belmont, H. Michael, Koenigsberg, Mordecai, Mokrzycki, Michele, Rominieki, Helen, Graham, Jay A., Rocca, Juan P., Bornkamp, Nicole, Jordan, Nicole, Schulte, Emma, Wu, Ming, Pullman, James, Slowikowski, Kamil, Raychaudhuri, Soumya, Guthridge, Joel, James, Judith, Buyon, Jill, Tuschl, Thomas, Putterman, Chaim
Published in Nature immunology (01.07.2019)
Published in Nature immunology (01.07.2019)
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Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis
Bae, Taejeong, Tomasini, Livia, Mariani, Jessica, Zhou, Bo, Roychowdhury, Tanmoy, Franjic, Daniel, Pletikos, Mihovil, Pattni, Reenal, Chen, Bo-Juen, Venturini, Elisa, Riley-Gillis, Bridget, Sestan, Nenad, Urban, Alexander E., Abyzov, Alexej, Vaccarino, Flora M.
Published in Science (American Association for the Advancement of Science) (02.02.2018)
Published in Science (American Association for the Advancement of Science) (02.02.2018)
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Human bone marrow hematopoietic stem cells are increased in frequency and myeloid-biased with age
Pang, Wendy W, Price, Elizabeth A, Sahoo, Debashis, Beerman, Isabel, Maloney, William J, Rossi, Derrick J, Schrier, Stanley L, Weissman, Irving L
Published in Proceedings of the National Academy of Sciences - PNAS (13.12.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (13.12.2011)
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Clock-like mutational processes in human somatic cells
Alexandrov, Ludmil B, Jones, Philip H, Wedge, David C, Sale, Julian E, Campbell, Peter J, Nik-Zainal, Serena, Stratton, Michael R
Published in Nature genetics (01.12.2015)
Published in Nature genetics (01.12.2015)
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Visceral and subcutaneous fat have different origins and evidence supports a mesothelial source
Chau, You-Ying, Bandiera, Roberto, Serrels, Alan, Martínez-Estrada, Ofelia M., Qing, Wei, Lee, Martin, Slight, Joan, Thornburn, Anna, Berry, Rachel, McHaffie, Sophie, Stimson, Roland H., Walker, Brian R., Chapuli, Ramon Muñoz, Schedl, Andreas, Hastie, Nick
Published in Nature cell biology (01.04.2014)
Published in Nature cell biology (01.04.2014)
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Early and multiple origins of metastatic lineages within primary tumors
Zhao, Zi-Ming, Zhao, Bixiao, Bai, Yalai, Iamarino, Atila, Gaffney, Stephen G., Schlessinger, Joseph, Lifton, Richard P., Rimm, David L., Townsend, Jeffrey P.
Published in Proceedings of the National Academy of Sciences - PNAS (23.02.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (23.02.2016)
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Circular RNA differential expression in blood cell populations and exploration of circRNA deregulation in pediatric acute lymphoblastic leukemia
Gaffo, Enrico, Boldrin, Elena, Dal Molin, Anna, Bresolin, Silvia, Bonizzato, Annagiulia, Trentin, Luca, Frasson, Chiara, Debatin, Klaus-Michael, Meyer, Lueder H., te Kronnie, Geertruij, Bortoluzzi, Stefania
Published in Scientific reports (11.10.2019)
Published in Scientific reports (11.10.2019)
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Spatiotemporal variation of mammalian protein complex stoichiometries
Ori, Alessandro, Iskar, Murat, Buczak, Katarzyna, Kastritis, Panagiotis, Parca, Luca, Andrés-Pons, Amparo, Singer, Stephan, Bork, Peer, Beck, Martin
Published in Genome Biology (14.03.2016)
Published in Genome Biology (14.03.2016)
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How Variable Clones Build an Invariant Retina
He, Jie, Zhang, Gen, Almeida, Alexandra D., Cayouette, Michel, Simons, Benjamin D., Harris, William A.
Published in Neuron (Cambridge, Mass.) (06.09.2012)
Published in Neuron (Cambridge, Mass.) (06.09.2012)
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Intrinsically disordered domain of transcription factor TCF-1 is required for T cell developmental fidelity
Goldman, Naomi, Chandra, Aditi, Johnson, Isabelle, Sullivan, Matthew A., Patil, Abhijeet R., Vanderbeck, Ashley, Jay, Atishay, Zhou, Yeqiao, Ferrari, Emily K., Mayne, Leland, Aguilan, Jennifer, Xue, Hai-Hui, Faryabi, Robert B., John Wherry, E., Sidoli, Simone, Maillard, Ivan, Vahedi, Golnaz
Published in Nature immunology (01.10.2023)
Published in Nature immunology (01.10.2023)
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Single‐cell transcriptomics uncovers an instructive T‐cell receptor role in adult γδ T‐cell lineage commitment
Scaramuzzino, Sara, Potier, Delphine, Ordioni, Robin, Grenot, Pierre, Payet‐Bornet, Dominique, Luche, Hervé, Malissen, Bernard
Published in The EMBO journal (01.03.2022)
Published in The EMBO journal (01.03.2022)
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MLL oncoprotein levels influence leukemia lineage identities
Janssens, Derek H., Duran, Melodie, Otto, Dominik J., Wu, Weifang, Xu, Yiling, Kirkey, Danielle, Mullighan, Charles G., Yi, Joanna S., Meshinchi, Soheil, Sarthy, Jay F., Ahmad, Kami, Henikoff, Steven
Published in Nature communications (29.10.2024)
Published in Nature communications (29.10.2024)
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Accelerated hematopoietic mitotic aging measured by DNA methylation, blood cell lineage, and Parkinson’s disease
Paul, Kimberly C, Binder, Alexandra M, Horvath, Steve, Kusters, Cynthia, Yan, Qi, Rosario, Irish Del, Yu, Yu, Bronstein, Jeff, Ritz, Beate
Published in BMC genomics (26.09.2021)
Published in BMC genomics (26.09.2021)
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The bone marrow hematopoietic niche and its adaptation to infection
Gomes, Ana Cordeiro, Saraiva, Margarida, Gomes, Maria Salomé
Published in Seminars in cell & developmental biology (01.04.2021)
Published in Seminars in cell & developmental biology (01.04.2021)
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Inflammatory status might direct ILC and NK cells to IL-17 expressing ILC3 and NK subsets in Behcet's disease
Gelmez, Metin Yusuf, Cinar, Suzan, Cetin, Esin Aktas, Ozcit-Gürel, Gulce, Babuna-Kobaner, Goncagul, Erdugan, Murat, Gul, Ahmet, Akdag-Kose, Afet, Deniz, Gunnur
Published in Immunology letters (01.07.2021)
Published in Immunology letters (01.07.2021)
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Tnni3k alleles influence ventricular mononuclear diploid cardiomyocyte frequency
Gan, Peiheng, Patterson, Michaela, Velasquez, Alexa, Wang, Kristy, Tian, Di, Windle, Jolene J., Tao, Ge, Judge, Daniel P., Makita, Takako, Park, Thomas J., Sucov, Henry M.
Published in PLoS genetics (07.10.2019)
Published in PLoS genetics (07.10.2019)
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Cell-type Dependent Alzheimer's Disease Phenotypes: Probing the Biology of Selective Neuronal Vulnerability
Muratore, Christina R., Zhou, Constance, Liao, Meichen, Fernandez, Marty A., Taylor, Walter M., Lagomarsino, Valentina N., Pearse, Richard V., Rice, Heather C., Negri, Joseph M., He, Amy, Srikanth, Priya, Callahan, Dana G., Shin, Taehwan, Zhou, Monica, Bennett, David A., Noggle, Scott, Love, J. Christopher, Selkoe, Dennis J., Young-Pearse, Tracy L.
Published in Stem cell reports (12.12.2017)
Published in Stem cell reports (12.12.2017)
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Molecular features of hepatosplenic T-cell lymphoma unravels potential novel therapeutic targets
Travert, Marion, Huang, Yenlin, de Leval, Laurence, Martin-Garcia, Nadine, Delfau-Larue, Marie-Helene, Berger, Françoise, Bosq, Jacques, Brière, Josette, Soulier, Jean, MacIntyre, Elizabeth, Marafioti, Teresa, de Reyniès, Aurélien, Gaulard, Philippe
Published in Blood (14.06.2012)
Published in Blood (14.06.2012)
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