Pan-cancer study detects genetic risk variants and shared genetic basis in two large cohorts
Rashkin, Sara R., Graff, Rebecca E., Kachuri, Linda, Thai, Khanh K., Alexeeff, Stacey E., Blatchins, Maruta A., Cavazos, Taylor B., Corley, Douglas A., Emami, Nima C., Hoffman, Joshua D., Jorgenson, Eric, Kushi, Lawrence H., Meyers, Travis J., Van Den Eeden, Stephen K., Ziv, Elad, Habel, Laurel A., Hoffmann, Thomas J., Sakoda, Lori C., Witte, John S.
Published in Nature communications (04.09.2020)
Published in Nature communications (04.09.2020)
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Journal Article
The landscape of host genetic factors involved in immune response to common viral infections
Kachuri, Linda, Francis, Stephen S, Morrison, Maike L, Wendt, George A, Bossé, Yohan, Cavazos, Taylor B, Rashkin, Sara R, Ziv, Elad, Witte, John S
Published in Genome medicine (27.10.2020)
Published in Genome medicine (27.10.2020)
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Journal Article
Cross-cancer evaluation of polygenic risk scores for 16 cancer types in two large cohorts
Graff, Rebecca E., Cavazos, Taylor B., Thai, Khanh K., Kachuri, Linda, Rashkin, Sara R., Hoffman, Joshua D., Alexeeff, Stacey E., Blatchins, Maruta, Meyers, Travis J., Leong, Lancelote, Tai, Caroline G., Emami, Nima C., Corley, Douglas A., Kushi, Lawrence H., Ziv, Elad, Van Den Eeden, Stephen K., Jorgenson, Eric, Hoffmann, Thomas J., Habel, Laurel A., Witte, John S., Sakoda, Lori C.
Published in Nature communications (12.02.2021)
Published in Nature communications (12.02.2021)
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Journal Article
Assessment of genetic susceptibility to multiple primary cancers through whole-exome sequencing in two large multi-ancestry studies
Cavazos, Taylor B, Kachuri, Linda, Graff, Rebecca E, Nierenberg, Jovia L, Thai, Khanh K, Alexeeff, Stacey, Van Den Eeden, Stephen, Corley, Douglas A, Kushi, Lawrence H, Hoffmann, Thomas J, Ziv, Elad, Habel, Laurel A, Jorgenson, Eric, Sakoda, Lori C, Witte, John S
Published in BMC medicine (06.10.2022)
Published in BMC medicine (06.10.2022)
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Journal Article
A Large-Scale Association Study Detects Novel Rare Variants, Risk Genes, Functional Elements, and Polygenic Architecture of Prostate Cancer Susceptibility
Emami, Nima C, Cavazos, Taylor B, Rashkin, Sara R, Cario, Clinton L, Graff, Rebecca E, Tai, Caroline G, Mefford, Joel A, Kachuri, Linda, Wan, Eunice, Wong, Simon, Aaronson, David, Presti, Joseph, Habel, Laurel A, Shan, Jun, Ranatunga, Dilrini K, Chao, Chun R, Ghai, Nirupa R, Jorgenson, Eric, Sakoda, Lori C, Kvale, Mark N, Kwok, Pui-Yan, Schaefer, Catherine, Risch, Neil, Hoffmann, Thomas J, Van Den Eeden, Stephen K, Witte, John S
Published in Cancer research (Chicago, Ill.) (01.04.2021)
Published in Cancer research (Chicago, Ill.) (01.04.2021)
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Journal Article
The landscape of host genetic factors involved in immune response to common viral infections
Kachuri, Linda, Francis, Stephen S, Morrison, Maike, Wendt, George A, Bossé, Yohan, Cavazos, Taylor B, Rashkin, Sara R, Ziv, Elad, Witte, John S
Published in medRxiv : the preprint server for health sciences (05.09.2020)
Published in medRxiv : the preprint server for health sciences (05.09.2020)
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Journal Article
Consensus molecular subtypes and orphan non-coding RNAs in colorectal cancer
Wang, Jeffrey, Karimzadeh, Mehran, Cavazos, Taylor B., Barzi, Afsaneh, Wang, Kathleen, Hanna, Rose, Arensdorf, Patrick, Chau, Kimberly H., Li, Helen, Goodarzi, Hani, Fish, Lisa, Hormozdiari, Fereydoun, Alipanahi, Babak
Published in Journal of clinical oncology (01.06.2023)
Published in Journal of clinical oncology (01.06.2023)
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Journal Article
Detection of early-stage cancers using circulating orphan non-coding RNAs in blood
Karimzadeh, Mehran, Wang, Jeffrey, Cavazos, Taylor B., Schwartzberg, Lee S., Multhaup, Michael, Ku, Jeremy, Zhao, Xuan, Wang, Jieyang, Wang, Kathleen, Hanna, Rose, Arensdorf, Patrick, Chau, Kimberly H, Li, Helen, Goodarzi, Hani, Fish, Lisa, Hormozdiari, Fereydoun, Alipanahi, Babak
Published in Journal of clinical oncology (01.06.2023)
Published in Journal of clinical oncology (01.06.2023)
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Journal Article
Harnessing cell-free orphan non-coding RNAs as a predictive measure of long-term survival in neoadjuvant breast cancer therapy
Cavazos, Taylor B., Karimzadeh, Mehran, Momen-Roknabadi, Amir, Hirst, Gillian L., Brown Swigart, Lamorna, Yau, Christina, Nguyen, Dang, Huang, Alice, Chen, Selina, Hanna, Rose, Krishnan, Akshaya, Hartwig, Anna, Yen, Jennifer, Acerbi, Irene, Hormozdiari, Fereydoun, Heditsian, Diane, Esserman, Laura, van 't Veer, Laura, Goodarzi, Hani, Alipanahi, Babak
Published in Journal of clinical oncology (01.06.2024)
Published in Journal of clinical oncology (01.06.2024)
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Journal Article
Identification of Novel Susceptibility Loci and Genes for Prostate Cancer Risk: A Transcriptome-Wide Association Study in Over 140,000 European Descendants
Wu, Lang, Wang, Jifeng, Cai, Qiuyin, Cavazos, Taylor B, Emami, Nima C, Long, Jirong, Shu, Xiao-Ou, Lu, Yingchang, Guo, Xingyi, Bauer, Joshua A, Pasaniuc, Bogdan, Penney, Kathryn L, Freedman, Matthew L, Kote-Jarai, Zsofia, Witte, John S, Haiman, Christopher A, Eeles, Rosalind A, Zheng, Wei
Published in Cancer research (Chicago, Ill.) (01.07.2019)
Published in Cancer research (Chicago, Ill.) (01.07.2019)
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Journal Article
Abstract P1-05-18: Orphan non-coding RNAs for early detection of breast cancer with liquid biopsy
Cavazos, Taylor B., Wang, Jeffrey, Afolabi, Oluwadamilare I., Huang, Alice, Lam, Dung Ngoc, Kilinc, Seda, Wang, Jieyang, Fish, Lisa, Zhao, Xuan, Pohl, Andy, Li, Helen, Chau, Kimberly H., Arensdorf, Patrick A., Hormozdiari, Fereydoun, Goodarzi, Hani, Alipanahi, Babak
Published in Cancer research (Chicago, Ill.) (01.03.2023)
Published in Cancer research (Chicago, Ill.) (01.03.2023)
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Journal Article
Abstract 1446: Genetic risk factors for the development of multiple primary cancers
Nierenberg, Jovia L., Kachuri, Linda, Cavazos, Taylor B., Graff, Rebecca E., Hoffmann, Thomas J., Zhang, Jie, Alexeeff, Stacey, Habel, Laurel, Corley, Douglas, Van Den Eeden, Stephen, Ziv, Elad, Sakoda, Lori C., Witte, John S.
Published in Cancer research (Chicago, Ill.) (15.06.2022)
Published in Cancer research (Chicago, Ill.) (15.06.2022)
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Journal Article
Abstract 3678: Beyond detection: AI-based classification of breast cancer invasiveness using cell-free orphan non-coding RNAs
Karimzadeh, Mehran, Cavazos, Taylor B., Chen, Nae-Chyun, Tbeileh, Noura K., Siegel, David, Momen-Roknabadi, Amir, Yen, Jennifer, Ku, Jeremy, Chen, Selina, Corti, Diana, Huang, Alice, Nguyen, Dang, Hanna, Rose, Lam, Ti, Kilinc, Seda, Murzynowski, Philip, Wang, Jieyang, Zhao, Xuan, Pohl, Andy, Behsaz, Babak, Li, Helen, Fish, Lisa, Chau, Kim H., Francis, Marra S., Veer, Laura J. Van't, Esserman, Laura J., Arensdorf, Patrick A., Goodarzi, Hani, Hormozdiari, Fereydoun, Alipanahi, Babak
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Journal Article
Abstract 5711: Blood-based early detection of non-small cell lung cancer using orphan noncoding RNAs
Karimzadeh, Mehran, Wang, Jeffrey, Sababi, Aiden, Afolabi, Oluwadamilare I., Lam, Dung Ngoc, Huang, Alice, Corti, Diana R., Garcia, Kristle C., Kilinc, Seda, Zhao, Xuan, Wang, Jieyang, Cavazos, Taylor B., Arensdorf, Patrick, Chau, Kimberly H., Li, Helen, Goodarzi, Hani, Fish, Lisa, Hormozdiari, Fereydoun, Alipanahi, Babak
Published in Cancer research (Chicago, Ill.) (04.04.2023)
Published in Cancer research (Chicago, Ill.) (04.04.2023)
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Journal Article
Cross-Cancer Evaluation of Polygenic Risk Scores for 17 Cancer Types in Two Large Cohorts
Graff, Rebecca E, Cavazos, Taylor B, Thai, Khanh K, Kachuri, Linda, Rashkin, Sara R, Hoffman, Joshua D, Alexeeff, Stacey E, Maruta Blatchins, Meyers, Travis J, Leong, Lancelote, Tai, Caroline G, Emami, Nima C, Corley, Douglas A, Kushi, Lawrence H, Ziv, Elad, Stephen K Van Den Eeden, Jorgenson, Eric, Hoffmann, Thomas J, Habel, Laurel A, Witte, John S, Sakoda, Lori C
Published in bioRxiv (26.03.2020)
Published in bioRxiv (26.03.2020)
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Paper
Association Study of Over 200,000 Subjects Detects Novel Rare Variants, Functional Elements, and Polygenic Architecture of Prostate Cancer Susceptibility
Emami, Nima C, Cavazos, Taylor B, Rashkin, Sara R, Cario, Clinton L, Graff, Rebecca E, Tai, Caroline G, Mefford, Joel A, Kachuri, Linda, Wan, Eunice, Wong, Simon, Aaronson, David S, Presti, Joseph, Habel, Laurel A, Shan, Jun, Ranatunga, Dilrini K, Chao, Chun R, Ghai, Nirupa R, Jorgenson, Eric, Sakoda, Lori C, Kvale, Mark N, Pui-Yan Kwok, Schaefer, Catherine, Risch, Neil, Hoffmann, Thomas J, Stephen K Van Den Eeden, Witte, John S
Published in bioRxiv (12.02.2020)
Published in bioRxiv (12.02.2020)
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Paper
Robust Sequence Determinants of α-Synuclein Toxicity in Yeast Implicate Membrane Binding
Newberry, Robert W, Taylor Arhar, Costello, Jean, Hartoularos, George C, Maxwell, Alison M, Zun Zar Chi Naing, Pittman, Maureen, Reddy, Nishith R, Schwarz, Daniel M C, Wassarman, Douglas R, Wu, Taia S, Barrero, Daniel, Caggiano, Christa, Catching, Adam, Cavazos, Taylor B, Estes, Laurel S, Faust, Bryan, Fink, Elissa A, Goldman, Miriam A, Gomez, Yessica K, Gordon, M Grace, Gunsalus, Laura M, Hoppe, Nick, Jaime-Garza, Maru, Johnson, Matthew C, Jones, Matthew G, Kung, Andrew F, Lopez, Kyle E, Lumpe, Jared, Calla Martyn, Mccarthy, Elizabeth E, Miller-Vedam, Lakshmi E, Navarro, Erik J, Aji Palar, Pellegrino, Jenna, Saylor, Wren, Stephens, Christina A, Strickland, Jack, Torosyan, Hayarpi, Wankowicz, Stephanie A, Wong, Daniel R, Wong, Garrett, Redding, Sy, Chow, Eric D, Degrado, William F, Kampmann, Martin
Published in bioRxiv (03.05.2020)
Published in bioRxiv (03.05.2020)
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