Dire wolves were the last of an ancient New World canid lineage
Perri, Angela R, Mitchell, Kieren J, Mouton, Alice, Álvarez-Carretero, Sandra, Hulme-Beaman, Ardern, Haile, James, Jamieson, Alexandra, Meachen, Julie, Lin, Audrey T, Schubert, Blaine W, Ameen, Carly, Antipina, Ekaterina E, Bover, Pere, Brace, Selina, Carmagnini, Alberto, Carøe, Christian, Samaniego Castruita, Jose A, Chatters, James C, Dobney, Keith, Dos Reis, Mario, Evin, Allowen, Gaubert, Philippe, Gopalakrishnan, Shyam, Gower, Graham, Heiniger, Holly, Helgen, Kristofer M, Kapp, Josh, Kosintsev, Pavel A, Linderholm, Anna, Ozga, Andrew T, Presslee, Samantha, Salis, Alexander T, Saremi, Nedda F, Shew, Colin, Skerry, Katherine, Taranenko, Dmitry E, Thompson, Mary, Sablin, Mikhail V, Kuzmin, Yaroslav V, Collins, Matthew J, Sinding, Mikkel-Holger S, Gilbert, M Thomas P, Stone, Anne C, Shapiro, Beth, Van Valkenburgh, Blaire, Wayne, Robert K, Larson, Greger, Cooper, Alan, Frantz, Laurent A F
Published in Nature (London) (04.03.2021)
Published in Nature (London) (04.03.2021)
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The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics
Gopalakrishnan, Shyam, Samaniego Castruita, Jose A, Sinding, Mikkel-Holger S, Kuderna, Lukas F K, Räikkönen, Jannikke, Petersen, Bent, Sicheritz-Ponten, Thomas, Larson, Greger, Orlando, Ludovic, Marques-Bonet, Tomas, Hansen, Anders J, Dalén, Love, Gilbert, M Thomas P
Published in BMC genomics (29.06.2017)
Published in BMC genomics (29.06.2017)
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Interspecific Gene Flow Shaped the Evolution of the Genus Canis
Gopalakrishnan, Shyam, Sinding, Mikkel-Holger S., Ramos-Madrigal, Jazmín, Niemann, Jonas, Samaniego Castruita, Jose A., Vieira, Filipe G., Carøe, Christian, Montero, Marc de Manuel, Kuderna, Lukas, Serres, Aitor, González-Basallote, Víctor Manuel, Liu, Yan-Hu, Wang, Guo-Dong, Marques-Bonet, Tomas, Mirarab, Siavash, Fernandes, Carlos, Gaubert, Philippe, Koepfli, Klaus-Peter, Budd, Jane, Rueness, Eli Knispel, Sillero, Claudio, Heide-Jørgensen, Mads Peter, Petersen, Bent, Sicheritz-Ponten, Thomas, Bachmann, Lutz, Wiig, Øystein, Hansen, Anders J., Gilbert, M. Thomas P.
Published in Current biology (05.11.2018)
Published in Current biology (05.11.2018)
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Ancient DNA suggests modern wolves trace their origin to a Late Pleistocene expansion from Beringia
Loog, Liisa, Thalmann, Olaf, Sinding, Mikkel‐Holger S., Schuenemann, Verena J., Perri, Angela, Germonpré, Mietje, Bocherens, Herve, Witt, Kelsey E., Samaniego Castruita, Jose A., Velasco, Marcela S., Lundstrøm, Inge K. C., Wales, Nathan, Sonet, Gontran, Frantz, Laurent, Schroeder, Hannes, Budd, Jane, Jimenez, Elodie‐Laure, Fedorov, Sergey, Gasparyan, Boris, Kandel, Andrew W., Lázničková‐Galetová, Martina, Napierala, Hannes, Uerpmann, Hans‐Peter, Nikolskiy, Pavel A., Pavlova, Elena Y., Pitulko, Vladimir V., Herzig, Karl‐Heinz, Malhi, Ripan S., Willerslev, Eske, Hansen, Anders J., Dobney, Keith, Gilbert, M. Thomas P., Krause, Johannes, Larson, Greger, Eriksson, Anders, Manica, Andrea
Published in Molecular ecology (01.05.2020)
Published in Molecular ecology (01.05.2020)
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Population genomics of grey wolves and wolf-like canids in North America
Sinding, Mikkel-Holger S, Gopalakrishan, Shyam, Vieira, Filipe G, Samaniego Castruita, Jose A, Raundrup, Katrine, Heide Jørgensen, Mads Peter, Meldgaard, Morten, Petersen, Bent, Sicheritz-Ponten, Thomas, Mikkelsen, Johan Brus, Marquard-Petersen, Ulf, Dietz, Rune, Sonne, Christian, Dalén, Love, Bachmann, Lutz, Wiig, Øystein, Hansen, Anders J, Gilbert, M Thomas P
Published in PLoS genetics (12.11.2018)
Published in PLoS genetics (12.11.2018)
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An ‛Aukward' Tale: A Genetic Approach to Discover the Whereabouts of the Last Great Auks
Thomas, Jessica E, Carvalho, Gary R, Haile, James, Martin, Michael D, Castruita, Jose A Samaniego, Niemann, Jonas, Sinding, Mikkel-Holger S, Sandoval-Velasco, Marcela, Rawlence, Nicolas J, Fuller, Errol, Fjeldså, Jon, Hofreiter, Michael, Stewart, John R, Gilbert, M Thomas P, Knapp, Michael
Published in Genes (15.06.2017)
Published in Genes (15.06.2017)
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Interspecific Gene Flow Shaped the Evolution of the Genus Canis
Gopalakrishnan, Shyam, Sinding, Mikkel-Holger S., Ramos-Madrigal, Jazmín, Niemann, Jonas, Samaniego Castruita, Jose A., Vieira, Filipe G., Carøe, Christian, de Manuel Montero, Marc, Kuderna, Lukas, Serres, Aitor, González-Basallote, Víctor Manuel, Liu, Yan-Hu, Wang, Guo-Dong, Marques-Bonet, Tomas, Mirarab, Siavash, Fernandes, Carlos, Gaubert, Philippe, Koepfli, Klaus-Peter, Budd, Jane, Rueness, Eli Knispel, Sillero, Claudio, Heide-Jørgensen, Mads Peter, Petersen, Bent, Sicheritz-Ponten, Thomas, Bachmann, Lutz, Wiig, Øystein, Hansen, Anders J., Gilbert, M. Thomas P.
Published in Current biology (02.12.2019)
Published in Current biology (02.12.2019)
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Genomic analysis of 600 vancomycin-resistant Enterococcus faecium reveals a high prevalence of ST80 and spread of similar vanA regions via IS1216E and plasmid transfer in diverse genetic lineages in Ireland
Egan, Sarah A., Kavanagh, Nicole L., Shore, Anna C., Mollerup, Sarah, Samaniego Castruita, José A., O’Connell, Brian, McManus, Brenda A., Brennan, Grainne I., Pinholt, Mette, Westh, Henrik, Coleman, David C.
Published in Journal of antimicrobial chemotherapy (02.02.2022)
Published in Journal of antimicrobial chemotherapy (02.02.2022)
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Journal Article
Arctic-adapted dogs emerged at the Pleistocene-Holocene transition
Sinding, Mikkel-Holger S, Gopalakrishnan, Shyam, Ramos-Madrigal, Jazmín, de Manuel, Marc, Pitulko, Vladimir V, Kuderna, Lukas, Feuerborn, Tatiana R, Frantz, Laurent A F, Vieira, Filipe G, Niemann, Jonas, Samaniego Castruita, Jose A, Carøe, Christian, Andersen-Ranberg, Emilie U, Jordan, Peter D, Pavlova, Elena Y, Nikolskiy, Pavel A, Kasparov, Aleksei K, Ivanova, Varvara V, Willerslev, Eske, Skoglund, Pontus, Fredholm, Merete, Wennerberg, Sanne Eline, Heide-Jørgensen, Mads Peter, Dietz, Rune, Sonne, Christian, Meldgaard, Morten, Dalén, Love, Larson, Greger, Petersen, Bent, Sicheritz-Pontén, Thomas, Bachmann, Lutz, Wiig, Øystein, Marques-Bonet, Tomas, Hansen, Anders J, Gilbert, M Thomas P
Published in Science (American Association for the Advancement of Science) (26.06.2020)
Published in Science (American Association for the Advancement of Science) (26.06.2020)
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Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages
Ramos-Madrigal, Jazmín, Sinding, Mikkel-Holger S., Carøe, Christian, Mak, Sarah S.T., Niemann, Jonas, Samaniego Castruita, José A., Fedorov, Sergey, Kandyba, Alexander, Germonpré, Mietje, Bocherens, Hervé, Feuerborn, Tatiana R., Pitulko, Vladimir V., Pavlova, Elena Y., Nikolskiy, Pavel A., Kasparov, Aleksei K., Ivanova, Varvara V., Larson, Greger, Frantz, Laurent A.F., Willerslev, Eske, Meldgaard, Morten, Petersen, Bent, Sicheritz-Ponten, Thomas, Bachmann, Lutz, Wiig, Øystein, Hansen, Anders J., Gilbert, M. Thomas P., Gopalakrishnan, Shyam
Published in Current biology (11.01.2021)
Published in Current biology (11.01.2021)
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Demographic reconstruction from ancient DNA supports rapid extinction of the great auk
Thomas, Jessica E, Carvalho, Gary R, Haile, James, Rawlence, Nicolas J, Martin, Michael D, Ho, Simon Yw, Sigfússon, Arnór Þ, Jósefsson, Vigfús A, Frederiksen, Morten, Linnebjerg, Jannie F, Samaniego Castruita, Jose A, Niemann, Jonas, Sinding, Mikkel-Holger S, Sandoval-Velasco, Marcela, Soares, André Er, Lacy, Robert, Barilaro, Christina, Best, Juila, Brandis, Dirk, Cavallo, Chiara, Elorza, Mikelo, Garrett, Kimball L, Groot, Maaike, Johansson, Friederike, Lifjeld, Jan T, Nilson, Göran, Serjeanston, Dale, Sweet, Paul, Fuller, Errol, Hufthammer, Anne Karin, Meldgaard, Morten, Fjeldså, Jon, Shapiro, Beth, Hofreiter, Michael, Stewart, John R, Gilbert, M Thomas P, Knapp, Michael
Published in eLife (26.11.2019)
Published in eLife (26.11.2019)
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Exploring the evolution and epidemiology of European CC1-MRSA-IV: tracking a multidrug-resistant community-associated meticillin-resistant Staphylococcus aureus clone
Earls, Megan R, Steinig, Eike J, Monecke, Stefan, Samaniego Castruita, José A, Simbeck, Alexandra, Schneider-Brachert, Wulf, Vremerǎ, Teodora, Dorneanu, Olivia S, Loncaric, Igor, Bes, Michèle, Lacoma, Alicia, Prat Aymerich, Cristina, Wernery, Ulrich, Armengol-Porta, Marc, Blomfeldt, Anita, Duchene, Sebastian, Bartels, Mette D, Ehricht, Ralf, Coleman, David C
Published in Microbial genomics (01.07.2021)
Published in Microbial genomics (01.07.2021)
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Journal Article
Arctic-adapted dogs emerged at the Pleistocene-Holocene transitiond
Sinding, Mikkel-Holger S., Gopalakrishnan, Shyam, Ramos-Madrigal, Jazmin, de Manuel, Marc, Pitulko, Vladimir V., Kuderna, Lukas, Feuerborn, Tatiana R., Frantz, Laurent A. F., Vieira, Filipe G., Niemann, Jonas, Castruita, Jose A. Samaniego, Caroe, Christian, Andersen-Ranberg, Emilie U., Jordan, Peter D., Pavlova, Elena Y., Nikolskiy, Pavel A., Kasparov, Aleksei K., Ivanova, Varvara V., Willerslev, Eske, Skoglund, Pontus, Fredholm, Merete, Wennerberg, Sanne Eline, Heide-Jorgensen, Mads Peter, Dietz, Rune, Sonne, Christian, Meldgaard, Morten, Dalen, Love, Larson, Greger, Petersen, Bent, Sicheritz-Ponten, Thomas, Bachmann, Lutz, Wiig, Oystein, Marques-Bonet, Tomas, Hansen, Anders J., Gilbert, M. Thomas P.
Published in Science (American Association for the Advancement of Science) (26.06.2020)
Published in Science (American Association for the Advancement of Science) (26.06.2020)
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Journal Article
Genomic analysis of 600 vancomycin-resistant Enterococcus faecium reveals a high prevalence of ST80 and spread of similar vanA regions via IS 1216E and plasmid transfer in diverse genetic lineages in Ireland
Egan, Sarah A., Kavanagh, Nicole L., Shore, Anna C., Mollerup, Sarah, Samaniego Castruita, José A., O’Connell, Brian, McManus, Brenda A., Brennan, Grainne I., Pinholt, Mette, Westh, Henrik, Coleman, David C.
Published in Journal of antimicrobial chemotherapy (02.02.2022)
Published in Journal of antimicrobial chemotherapy (02.02.2022)
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Journal Article
Genomic analysis of 600 vancomycin-resistant Enterococcus faecium reveals a high prevalence of ST80 and spread of similar vanA regions via IS1216E and plasmid transfer in diverse genetic lineages in Ireland
Egan, Sarah A, Kavanagh, Nicole L, Shore, Anna C, Mollerup, Sarah, Samaniego Castruita, José A, O'Connell, Brian, McManus, Brenda A, Brennan, Grainne I, Pinholt, Mette, Westh, Henrik, Coleman, David C
Published in Journal of antimicrobial chemotherapy (02.02.2022)
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Published in Journal of antimicrobial chemotherapy (02.02.2022)
Journal Article
Modern wolves trace their origin to a late Pleistocene expansion from Beringia
Loog, Liisa, Thalmann, Olaf, Sinding, Mikkel-Holger S, Schuenemann, Verena J, Perri, Angela, Germonpre, Mietje, Bocherens, Herve, Witt, Kelsey E, Samaniego Castruita, Jose A, Velasco, Marcela S, Lundstrom, Inge K C, Wales, Nathan, Sonet, Gontran, Frantz, Laurent, Schroeder, Hannes, Budd, Jane, Jimenez, Elodie-Laure, Fedorov, Sergey, Gasparyan, Boris, Kandel, Andrew W, Martina Lazni kova-Galetova, Napierala, Hannes, Hans-Peter Uerpmann, Nikolskiy, Pavel A, Pavlova, Elena Y, Pitulko, Vladimir V, Herzig, Karl-Heinz, Malhi, Ripan S, Willerslev, Eske, Hansen, Anders J, Dobney, Keith, Gilbert, M Thomas P, Krause, Johannes, Larson, Greger, Eriksson, Anders, Manica, Andrea
Published in bioRxiv (18.07.2018)
Published in bioRxiv (18.07.2018)
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