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A systematic review of natural language processing applied to radiology reports

A systematic review of natural language processing applied to radiology reports

by Casey, Arlene, Davidson, Emma, Poon, Michael, Dong, Hang, Duma, Daniel, Grivas, Andreas, Grover, Claire, Suárez-Paniagua, Víctor, Tobin, Richard, Whiteley, William, Wu, Honghan, Alex, Beatrice
Published in BMC medical informatics and decision making (03.06.2021)

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Journal Article

Ontology-driven and weakly supervised rare disease identification from clinical notes

Ontology-driven and weakly supervised rare disease identification from clinical notes

by Dong, Hang, Suárez-Paniagua, Víctor, Zhang, Huayu, Wang, Minhong, Casey, Arlene, Davidson, Emma, Chen, Jiaoyan, Alex, Beatrice, Whiteley, William, Wu, Honghan
Published in BMC medical informatics and decision making (05.05.2023)

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Journal Article

Assessing antidepressant exposure and response using UK electronic health record data

Assessing antidepressant exposure and response using UK electronic health record data

by Iveson, Matthew, Ball, Emily, Casey, Arlene, Falis, Matus, McIntosh, Andrew, Whalley, Heather
Published in International journal of population data science (10.09.2024)

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Journal Article

Improving transparency and quality assurance: Operationalising semi-automated data provenance tracking in a Trusted Research Environment

Improving transparency and quality assurance: Operationalising semi-automated data provenance tracking in a Trusted Research Environment

by O'Sullivan, Katherine, Markovic, Milan, Dymiter, Jaroslaw, Martin, Adrian, Odo, Chinasa, Rowlands, Helen, Ciocarlan, Ana, Wilde, Katie, Casey, Arlene
Published in International journal of population data science (10.09.2024)

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Journal Article

The reporting quality of natural language processing studies: systematic review of studies of radiology reports

The reporting quality of natural language processing studies: systematic review of studies of radiology reports

by Davidson, Emma M, Poon, Michael T C, Casey, Arlene, Grivas, Andreas, Duma, Daniel, Dong, Hang, Suárez-Paniagua, Víctor, Grover, Claire, Tobin, Richard, Whalley, Heather, Wu, Honghan, Alex, Beatrice, Whiteley, William
Published in BMC medical imaging (02.10.2021)

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Journal Article

FLAP : a framework for linking free-text addresses to the Ordnance Survey Unique Property Reference Number database

FLAP : a framework for linking free-text addresses to the Ordnance Survey Unique Property Reference Number database

by Zhang, Huayu, Casey, Arlene, Guellil, Imane, Suárez-Paniagua, Víctor, MacRae, Clare, Marwick, Charis, Wu, Honghan, Guthrie, Bruce, Alex, Beatrice
Published in Frontiers in digital health (28.11.2023)

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Journal Article

Understanding the performance and reliability of NLP tools: a comparison of four NLP tools predicting stroke phenotypes in radiology reports

Understanding the performance and reliability of NLP tools: a comparison of four NLP tools predicting stroke phenotypes in radiology reports

by Casey, Arlene, Davidson, Emma, Grover, Claire, Tobin, Richard, Grivas, Andreas, Zhang, Huayu, Schrempf, Patrick, O'Neil, Alison Q, Lee, Liam, Walsh, Michael, Pellie, Freya, Ferguson, Karen, Cvoro, Vera, Wu, Honghan, Whalley, Heather, Mair, Grant, Whiteley, William, Alex, Beatrice
Published in Frontiers in digital health (28.09.2023)

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Journal Article

Plague Dot Text: Text mining and annotation of outbreak reports of the Third Plague Pandemic (1894-1952)

Plague Dot Text: Text mining and annotation of outbreak reports of the Third Plague Pandemic (1894-1952)

by Casey, Arlene, Bennett, Mike, Tobin, Richard, Grover, Claire, Walker, Iona, Engelmann, Lukas, Alex, Beatrice
Published in Journal of data mining and digital humanities (20.01.2021)

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Journal Article

Plague Dot Text: Text mining and annotation of outbreak reports of the Third Plague Pandemic (1894-1952)

Plague Dot Text: Text mining and annotation of outbreak reports of the Third Plague Pandemic (1894-1952)

by Arlene Casey, Mike Bennett, Richard Tobin, Claire Grover, Iona Walker, Lukas Engelmann, Beatrice Alex
Published in Journal of data mining and digital humanities (01.01.2021)

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Journal Article

LitCrit : exploring intentions as a basis for automated feedback on Related Work

LitCrit : exploring intentions as a basis for automated feedback on Related Work

by Casey, Arlene Jane
Year of Publication 2020

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Dissertation

Infusing clinical knowledge into tokenisers for language models

Infusing clinical knowledge into tokenisers for language models

by Hasan, Abul, Wu, Jinge, Nguyen, Quang Ngoc, Andres, Salomé, Guellil, Imane, Zhang, Huayu, Casey, Arlene, Alex, Beatrice, Guthrie, Bruce, Wu, Honghan
Year of Publication 20.06.2024

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Journal Article

Ontology-Driven and Weakly Supervised Rare Disease Identification from Clinical Notes

Ontology-Driven and Weakly Supervised Rare Disease Identification from Clinical Notes

by Dong, Hang, Suárez-Paniagua, Víctor, Zhang, Huayu, Wang, Minhong, Casey, Arlene, Davidson, Emma, Chen, Jiaoyan, Alex, Beatrice, Whiteley, William, Wu, Honghan
Published in arXiv.org (03.05.2023)

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Paper Journal Article

Plague Dot Text: Text mining and annotation of outbreak reports of the Third Plague Pandemic (1894-1952)

Plague Dot Text: Text mining and annotation of outbreak reports of the Third Plague Pandemic (1894-1952)

by Casey, Arlene, Bennett, Mike, Tobin, Richard, Grover, Claire, Walker, Iona, Engelmann, Lukas, Alex, Beatrice
Published in arXiv.org (11.01.2021)

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Paper Journal Article

A Systematic Review of Natural Language Processing Applied to Radiology Reports

A Systematic Review of Natural Language Processing Applied to Radiology Reports

by Casey, Arlene, Davidson, Emma, Poon, Michael, Dong, Hang, Duma, Daniel, Grivas, Andreas, Grover, Claire, Suárez-Paniagua, Víctor, Tobin, Richard, Whiteley, William, Wu, Honghan, Alex, Beatrice
Published in arXiv.org (18.02.2021)

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Paper Journal Article

Infusing clinical knowledge into tokenisers for language models

Infusing clinical knowledge into tokenisers for language models

by Hasan, Abul, Wu, Jinge, Nguyen, Quang Ngoc, Salomé Andres, Guellil, Imane, Zhang, Huayu, Casey, Arlene, Alex, Beatrice, Guthrie, Bruce, Wu, Honghan
Published in arXiv.org (20.06.2024)

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Paper

Fast Handwritten Digit Recognition with Multilayer Ensemble Extreme Learning Machine

Fast Handwritten Digit Recognition with Multilayer Ensemble Extreme Learning Machine

by Ghodrati Noushahr, Hossein, Ahmadi, Samad, Casey, Arlene
Published in Research and Development in Intelligent Systems XXXII

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Book Chapter

A Comparative Analysis of Ranking Methods in a Hybrid Filter-Wrapper Model for Feature Selection in DNA Microarrays

A Comparative Analysis of Ranking Methods in a Hybrid Filter-Wrapper Model for Feature Selection in DNA Microarrays

by Fahy, Conor, Ahmadi, Samad, Casey, Arlene
Published in Research and Development in Intelligent Systems XXXII

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Book Chapter