Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines
Wang, Li, Kainulainen, Markus H., Jiang, Nannan, Di, Han, Bonenfant, Gaston, Mills, Lisa, Currier, Michael, Shrivastava-Ranjan, Punya, Calderon, Brenda M., Sheth, Mili, Mann, Brian R., Hossain, Jaber, Lin, Xudong, Lester, Sandra, Pusch, Elizabeth A., Jones, Joyce, Cui, Dan, Chatterjee, Payel, Jenks, M. Harley, Morantz, Esther K., Larson, Gloria P., Hatta, Masato, Harcourt, Jennifer L., Tamin, Azaibi, Li, Yan, Tao, Ying, Zhao, Kun, Lacek, Kristine, Burroughs, Ashley, Wang, Wei, Wilson, Malania, Wong, Terianne, Park, So Hee, Tong, Suxiang, Barnes, John R., Tenforde, Mark W., Self, Wesley H., Shapiro, Nathan I., Exline, Matthew C., Files, D. Clark, Gibbs, Kevin W., Hager, David N., Patel, Manish, Halpin, Alison L., McMullan, Laura K., Lee, Justin S., Xia, Hongjie, Xie, Xuping, Shi, Pei-Yong, Davis, C. Todd, Spiropoulou, Christina F., Thornburg, Natalie J., Oberste, M. Steven, Dugan, Vivien G., Wentworth, David E., Zhou, Bin
Published in Nature communications (27.07.2022)
Published in Nature communications (27.07.2022)
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Journal Article
NeXML: Rich, Extensible, and Verifiable Representation of Comparative Data and Metadata
Vos, Rutger A., Balhoff, James P., Caravas, Jason A., Holder, Mark T., Lapp, Hilmar, Maddison, Wayne P., Midford, Peter E., Priyam, Anurag, Sukumaran, Jeet, Xia, Xuhua, Stoltzfus, Arlin
Published in Systematic biology (01.07.2012)
Published in Systematic biology (01.07.2012)
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Journal Article
Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1
Mercante, Jeffrey W, Caravas, Jason A, Ishaq, Maliha K, Kozak-Muiznieks, Natalia A, Raphael, Brian H, Winchell, Jonas M
Published in PloS one (18.10.2018)
Published in PloS one (18.10.2018)
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Journal Article
Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants
Diaz, Maureen H, Desai, Heta P, Morrison, Shatavia S, Benitez, Alvaro J, Wolff, Bernard J, Caravas, Jason, Read, Timothy D, Dean, Deborah, Winchell, Jonas M
Published in PloS one (14.04.2017)
Published in PloS one (14.04.2017)
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Journal Article
BIO::Phylo-phyloinformatic analysis using perl
Vos, Rutger A, Caravas, Jason, Hartmann, Klaas, Jensen, Mark A, Miller, Chase
Published in BMC bioinformatics (27.02.2011)
Published in BMC bioinformatics (27.02.2011)
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Journal Article
Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies
Kozak-Muiznieks, Natalia A., Morrison, Shatavia S., Mercante, Jeffrey W., Ishaq, Maliha K., Johnson, Taccara, Caravas, Jason, Lucas, Claressa E., Brown, Ellen, Raphael, Brian H., Winchell, Jonas M.
Published in Infection, genetics and evolution (01.04.2018)
Published in Infection, genetics and evolution (01.04.2018)
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Journal Article
Mitochondrial sequence data indicate “Vicariance by Erosion” as a mechanism of species diversification in North American Ptomaphagus (Coleoptera, Leiodidae, Cholevinae) cave beetles
Leray, Vincent L., Caravas, Jason, Friedrich, Markus, Zigler, Kirk S.
Published in Subterranean biology (2019)
Published in Subterranean biology (2019)
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Journal Article
Evidence of a Conserved Molecular Response to Selection for Increased Brain Size in Primates
Boddy, Amy M, Harrison, Peter W, Montgomery, Stephen H, Caravas, Jason A, Raghanti, Mary Ann, Phillips, Kimberley A, Mundy, Nicholas I, Wildman, Derek E
Published in Genome biology and evolution (01.03.2017)
Published in Genome biology and evolution (01.03.2017)
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Journal Article
Mashtree: a rapid comparison of whole genome sequence files
Katz, Lee, Griswold, Taylor, Morrison, Shatavia, Caravas, Jason, Zhang, Shaokang, Bakker, Henk, Deng, Xiangyu, Carleton, Heather
Published in Journal of open source software (10.12.2019)
Published in Journal of open source software (10.12.2019)
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Journal Article
Correction: Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants
Diaz, Maureen H, Desai, Heta P, Morrison, Shatavia S, Benitez, Alvaro J, Wolff, Bernard J, Caravas, Jason, Read, Timothy D, Dean, Deborah, Winchell, Jonas M
Published in PloS one (2017)
Published in PloS one (2017)
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Journal Article
Dramatic Expansion and Developmental Expression Diversification of the Methuselah Gene Family During Recent Drosophila Evolution
PATEL, MEGHNA V., HALLAL, DANA A., JONES, JEFFERY W., BRONNER, DENISE N., ZEIN, RAMI, CARAVAS, JASON, HUSAIN, ZAHABIYA, FRIEDRICH, MARKUS, VANBERKUM, MARK F.A.
Published in Journal of experimental zoology. Part B, Molecular and developmental evolution (01.07.2012)
Published in Journal of experimental zoology. Part B, Molecular and developmental evolution (01.07.2012)
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Journal Article
From PPROM to caul: The evolution of membrane rupture in mammals
Stempfle, Gregory, McGowen, Michael R., Caravas, Jason A., Wildman, Derek E.
Published in Applied & translational genomics (01.12.2013)
Published in Applied & translational genomics (01.12.2013)
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Journal Article
Episodic radiations in the fly tree of life
Wiegmann, Brian M, Trautwein, Michelle D, Winkler, Isaac S, Barr, Norman B, Kim, Jung-Wook, Lambkin, Christine, Bertone, Matthew A, Cassel, Brian K, Bayless, Keith M, Heimberg, Alysha M, Wheeler, Benjamin M, Peterson, Kevin J, Pape, Thomas, Sinclair, Bradley J, Skevington, Jeffrey H, Blagoderov, Vladimir, Caravas, Jason, Kutty, Sujatha Narayanan, Schmidt-Ott, Urs, Kampmeier, Gail E, Thompson, F. Christian, Grimaldi, David A, Beckenbach, Andrew T, Courtney, Gregory W, Friedrich, Markus, Meier, Rudolf, Yeates, David K
Published in Proceedings of the National Academy of Sciences - PNAS (05.04.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (05.04.2011)
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Journal Article
New insights from hemichordate genomes: prebilaterian origin and parallel modifications in the paired domain of the Pax gene eyegone
Friedrich, Markus, Caravas, Jason
Published in Journal of experimental zoology. Part B, Molecular and developmental evolution (15.09.2011)
Published in Journal of experimental zoology. Part B, Molecular and developmental evolution (15.09.2011)
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Journal Article
The core transcriptome of mammalian placentas and the divergence of expression with placental shape
Armstrong, Don L, McGowen, Michael R, Weckle, Amy, Pantham, Priyadarshini, Caravas, Jason, Agnew, Dalen, Benirschke, Kurt, Savage-Rumbaugh, Sue, Nevo, Eviatar, Kim, Chong J, Wagner, Gnter P, Romero, Roberto, Wildman, Derek E
Published in Placenta (Eastbourne) (01.09.2017)
Published in Placenta (Eastbourne) (01.09.2017)
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Journal Article
Phototransduction and clock gene expression in the troglobiont beetle Ptomaphagus hirtus of Mammoth cave
Friedrich, Markus, Chen, Rui, Daines, Bryce, Bao, Riyue, Caravas, Jason, Rai, Puneet K, Zagmajster, Maja, Peck, Stewart B
Published in Journal of experimental biology (01.11.2011)
Published in Journal of experimental biology (01.11.2011)
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Journal Article
Assessment of Clinical and Virological Characteristics of SARS-CoV-2 Infection Among Children Aged 0 to 4 Years and Their Household Members
Karron, Ruth A., Hetrich, Marissa K., Knoll, Maria Deloria, Schappell, Elizabeth, Meece, Jennifer, Hanson, Erika, Tong, Suxiang, Lee, Justin S., Veguilla, Vic, Dawood, Fatimah S., Council-DiBitetto, Christine, Gatto, Milena, Garcia-Quesada, Maria, Ghasri, Tina, Gormley, Amanda, Guenther, Kyley, Herbert, Kristi, Jordan, Maria, Loehr, Karen, Morsell, Jason, Oliva, Jennifer, San Mateo, Jocelyn, Smith, Khadija, Wanionek, Kimberli, Weadon, Cathleen, Woods, Suzanne, Li, Yan, Kelleher, Anna, Uehara, Anna, Tao, Ying, Zhang, Jing, Lynch, Brian, Bentz, Meghan, Burgin, Alex, Burroughs, Mark, Davis, Morgan L., Madden, Joseph C., Nobles, Sarah, Padilla, Jasmine, Sheth, Mili, Bhatra, Dhwani, Caravas, Jason, Cook, Peter, Howard, Dakota, Lacek, Kristine, Paden, Clint, Rambo-Martin, Ben, Shepard, Samuel
Published in JAMA network open (31.08.2022)
Published in JAMA network open (31.08.2022)
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