Retooling phage display with electrohydrodynamic nanomixing and nanopore sequencing
Raftery, Lyndon J, Howard, Christopher B, Grewal, Yadveer S, Vaidyanathan, Ramanathan, Jones, Martina L, Anderson, Will, Korbie, Darren, Duarte, Tania, Cao, Minh Duc, Nguyen, Son Hoang, Coin, Lachlan J. M, Mahler, Stephen M, Trau, Matt
Published in Lab on a chip (21.12.2019)
Published in Lab on a chip (21.12.2019)
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Journal Article
Ongoing human chromosome end extension revealed by analysis of BioNano and nanopore data
Shao, Haojing, Zhou, Chenxi, Cao, Minh Duc, Coin, Lachlan J. M.
Published in Scientific reports (09.11.2018)
Published in Scientific reports (09.11.2018)
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Journal Article
Emerging technologies for telemedicine
Cao, Minh Duc, Minh, Cao Duc, Shimizu, Shuji, Antoku, Yasuaki, Torata, Nobuhiro, Kudo, Kuriko, Okamura, Koji, Nakashima, Naoki, Tanaka, Masao
Published in Korean journal of radiology (01.01.2012)
Published in Korean journal of radiology (01.01.2012)
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Journal Article
Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning
Teng, Haotian, Cao, Minh Duc, Hall, Michael B, Duarte, Tania, Wang, Sheng, Coin, Lachlan J M
Published in Gigascience (01.05.2018)
Published in Gigascience (01.05.2018)
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Journal Article
Pasa: leveraging population pangenome graph to scaffold prokaryote genome assemblies
Do, Van Hoan, Nguyen, Son Hoang, Le, Duc Quang, Nguyen, Tam Thi, Nguyen, Canh Hao, Ho, Tho Huu, Vo, Nam S, Nguyen, Trang, Nguyen, Hoang Anh, Cao, Minh Duc
Published in Nucleic acids research (09.02.2024)
Published in Nucleic acids research (09.02.2024)
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Journal Article
AMRViz enables seamless genomics analysis and visualization of antimicrobial resistance
Le, Duc Quang, Nguyen, Son Hoang, Nguyen, Tam Thi, Nguyen, Canh Hao, Ho, Tho Huu, Vo, Nam S, Nguyen, Trang, Nguyen, Hoang Anh, Cao, Minh Duc
Published in BMC bioinformatics (16.05.2024)
Published in BMC bioinformatics (16.05.2024)
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Journal Article
Efficient inference of large prokaryotic pangenomes with PanTA
Le, Duc Quang, Nguyen, Tien Anh, Nguyen, Son Hoang, Nguyen, Tam Thi, Nguyen, Canh Hao, Phung, Huong Thanh, Ho, Tho Huu, Vo, Nam S, Nguyen, Trang, Nguyen, Hoang Anh, Cao, Minh Duc
Published in Genome Biology (06.08.2024)
Published in Genome Biology (06.08.2024)
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Journal Article
AMRomics: a scalable workflow to analyze large microbial genome collections
Le, Duc Quang, Nguyen, Tam Thi, Nguyen, Canh Hao, Ho, Tho Huu, Vo, Nam S, Nguyen, Trang, Nguyen, Hoang Anh, Vinh, Le Sy, Dang, Thanh Hai, Cao, Minh Duc, Nguyen, Son Hoang
Published in BMC genomics (22.07.2024)
Published in BMC genomics (22.07.2024)
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Journal Article
Inferring short tandem repeat variation from paired-end short reads
Cao, Minh Duc, Tasker, Edward, Willadsen, Kai, Imelfort, Michael, Vishwanathan, Sailaja, Sureshkumar, Sridevi, Balasubramanian, Sureshkumar, Bodén, Mikael
Published in Nucleic acids research (01.02.2014)
Published in Nucleic acids research (01.02.2014)
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Journal Article
npInv: accurate detection and genotyping of inversions using long read sub-alignment
Shao, Haojing, Ganesamoorthy, Devika, Duarte, Tania, Cao, Minh Duc, Hoggart, Clive J, Coin, Lachlan J M
Published in BMC bioinformatics (13.07.2018)
Published in BMC bioinformatics (13.07.2018)
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Journal Article
Simulating the dynamics of targeted capture sequencing with CapSim
Cao, Minh Duc, Ganesamoorthy, Devika, Zhou, Chenxi, Coin, Lachlan J M
Published in Bioinformatics (01.03.2018)
Published in Bioinformatics (01.03.2018)
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Journal Article
Real-time resolution of short-read assembly graph using ONT long reads
Nguyen, Son Hoang, Cao, Minh Duc, Coin, Lachlan J M
Published in PLoS computational biology (20.01.2021)
Published in PLoS computational biology (20.01.2021)
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Journal Article
Whole genome deep sequencing analysis of cell-free DNA in samples with low tumour content
Ganesamoorthy, Devika, Robertson, Alan James, Chen, Wenhan, Hall, Michael B, Cao, Minh Duc, Ferguson, Kaltin, Lakhani, Sunil R, Nones, Katia, Simpson, Peter T, Coin, Lachlan J M
Published in BMC cancer (20.01.2022)
Published in BMC cancer (20.01.2022)
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Journal Article
Realtime analysis and visualization of MinION sequencing data with npReader
Cao, Minh Duc, Ganesamoorthy, Devika, Cooper, Matthew A, Coin, Lachlan J M
Published in Bioinformatics (01.03.2016)
Published in Bioinformatics (01.03.2016)
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Journal Article
Octapeptin C4 and polymyxin resistance occur via distinct pathways in an epidemic XDR Klebsiella pneumoniae ST258 isolate
Pitt, Miranda E, Cao, Minh Duc, Butler, Mark S, Ramu, Soumya, Ganesamoorthy, Devika, Blaskovich, Mark A T, Coin, Lachlan J M, Cooper, Matthew A
Published in Journal of antimicrobial chemotherapy (01.03.2019)
Published in Journal of antimicrobial chemotherapy (01.03.2019)
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Journal Article
Sequencing technologies and tools for short tandem repeat variation detection
Cao, Minh Duc, Balasubramanian, Sureshkumar, Bodén, Mikael
Published in Briefings in bioinformatics (01.03.2015)
Published in Briefings in bioinformatics (01.03.2015)
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Journal Article
Real-time demultiplexing Nanopore barcoded sequencing data with npBarcode
Nguyen, Son Hoang, Duarte, Tania P S, Coin, Lachlan J M, Cao, Minh Duc
Published in Bioinformatics (Oxford, England) (15.12.2017)
Published in Bioinformatics (Oxford, England) (15.12.2017)
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