Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure
Commowick, Olivier, Istace, Audrey, Kain, Michaël, Laurent, Baptiste, Leray, Florent, Simon, Mathieu, Pop, Sorina Camarasu, Girard, Pascal, Améli, Roxana, Ferré, Jean-Christophe, Kerbrat, Anne, Tourdias, Thomas, Cervenansky, Frédéric, Glatard, Tristan, Beaumont, Jérémy, Doyle, Senan, Forbes, Florence, Knight, Jesse, Khademi, April, Mahbod, Amirreza, Wang, Chunliang, McKinley, Richard, Wagner, Franca, Muschelli, John, Sweeney, Elizabeth, Roura, Eloy, Lladó, Xavier, Santos, Michel M, Santos, Wellington P, Silva-Filho, Abel G, Tomas-Fernandez, Xavier, Urien, Hélène, Bloch, Isabelle, Valverde, Sergi, Cabezas, Mariano, Vera-Olmos, Francisco Javier, Malpica, Norberto, Guttmann, Charles, Vukusic, Sandra, Edan, Gilles, Dojat, Michel, Styner, Martin, Warfield, Simon K, Cotton, François, Barillot, Christian
Published in Scientific reports (12.09.2018)
Published in Scientific reports (12.09.2018)
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Journal Article
Multiple sclerosis lesions segmentation from multiple experts: The MICCAI 2016 challenge dataset
Commowick, Olivier, Kain, Michaël, Casey, Romain, Ameli, Roxana, Ferré, Jean-Christophe, Kerbrat, Anne, Tourdias, Thomas, Cervenansky, Frédéric, Camarasu-Pop, Sorina, Glatard, Tristan, Vukusic, Sandra, Edan, Gilles, Barillot, Christian, Dojat, Michel, Cotton, Francois
Published in NeuroImage (Orlando, Fla.) (01.12.2021)
Published in NeuroImage (Orlando, Fla.) (01.12.2021)
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MicroVIP: Microscopy image simulation on the Virtual Imaging Platform
Ahmad, Ali, Vanel, Guillaume, Camarasu-Pop, Sorina, Bonnet, Axel, Frindel, Carole, Rousseau, David
Published in SoftwareX (01.12.2021)
Published in SoftwareX (01.12.2021)
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Journal Article
The first MICCAI challenge on PET tumor segmentation
Hatt, Mathieu, Laurent, Baptiste, Ouahabi, Anouar, Fayad, Hadi, Tan, Shan, Li, Laquan, Lu, Wei, Jaouen, Vincent, Tauber, Clovis, Czakon, Jakub, Drapejkowski, Filip, Dyrka, Witold, Camarasu-Pop, Sorina, Cervenansky, Frédéric, Girard, Pascal, Glatard, Tristan, Kain, Michael, Yao, Yao, Barillot, Christian, Kirov, Assen, Visvikis, Dimitris
Published in Medical image analysis (01.02.2018)
Published in Medical image analysis (01.02.2018)
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Journal Article
A Framework for the Generation of Realistic Synthetic Cardiac Ultrasound and Magnetic Resonance Imaging Sequences From the Same Virtual Patients
Zhou, Y., Giffard-Roisin, S., De Craene, M., Camarasu-Pop, S., D'Hooge, J., Alessandrini, M., Friboulet, D., Sermesant, M., Bernard, O.
Published in IEEE transactions on medical imaging (01.03.2018)
Published in IEEE transactions on medical imaging (01.03.2018)
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Journal Article
Standardized Evaluation System for Left Ventricular Segmentation Algorithms in 3D Echocardiography
Bernard, Olivier, Bosch, Johan G., Heyde, Brecht, Alessandrini, Martino, Barbosa, Daniel, Camarasu-Pop, Sorina, Cervenansky, Frederic, Valette, Sebastien, Mirea, Oana, Bernier, Michel, Jodoin, Pierre-Marc, Domingos, Jaime Santo, Stebbing, Richard V., Keraudren, Kevin, Oktay, Ozan, Caballero, Jose, Shi, Wei, Rueckert, Daniel, Milletari, Fausto, Ahmadi, Seyed-Ahmad, Smistad, Erik, Lindseth, Frank, van Stralen, Maartje, Wang, Chen, Smedby, Orjan, Donal, Erwan, Monaghan, Mark, Papachristidis, Alex, Geleijnse, Marcel L., Galli, Elena, D'hooge, Jan
Published in IEEE transactions on medical imaging (01.04.2016)
Published in IEEE transactions on medical imaging (01.04.2016)
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Journal Article
Combining analytical modeling, realistic simulation and real experimentation for the optimization of Monte-Carlo applications on the European Grid Infrastructure
Camarasu-Pop, Sorina, Glatard, Tristan, Benoit-Cattin, Hugues
Published in Future generation computer systems (01.04.2016)
Published in Future generation computer systems (01.04.2016)
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Journal Article
A Virtual Imaging Platform for Multi-Modality Medical Image Simulation
Glatard, T., Lartizien, C., Gibaud, B., Ferreira da Silva, Rafael, Forestier, G., Cervenansky, F., Alessandrini, M., Benoit-Cattin, H., Bernard, O., Camarasu-Pop, S., Cerezo, N., Clarysse, P., Gaignard, A., Hugonnard, P., Liebgott, H., Marache, S., Marion, A., Montagnat, J., Tabary, J., Friboulet, D.
Published in IEEE transactions on medical imaging (01.01.2013)
Published in IEEE transactions on medical imaging (01.01.2013)
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Journal Article
Reproducibility of Tumor Segmentation Outcomes with a Deep Learning Model
Ligneris, Morgane Des, Bonnet, Axel, Chatelain, Yohan, Glatard, Tristan, Sdika, Michael, Vila, Gael, Wargnier-Dauchelle, Valentine, Pop, Sorina, Frindel, Carole
Published in 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI) (18.04.2023)
Published in 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI) (18.04.2023)
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Conference Proceeding
Software architectures to integrate workflow engines in science gateways
Glatard, Tristan, Rousseau, Marc-Étienne, Camarasu-Pop, Sorina, Adalat, Reza, Beck, Natacha, Das, Samir, da Silva, Rafael Ferreira, Khalili-Mahani, Najmeh, Korkhov, Vladimir, Quirion, Pierre-Olivier, Rioux, Pierre, Olabarriaga, Sílvia D., Bellec, Pierre, Evans, Alan C.
Published in Future generation computer systems (01.10.2017)
Published in Future generation computer systems (01.10.2017)
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Journal Article
Computational Reproducibility in Metabolite Quantification Applied to Short Echo Time In Vivo MR Spectroscopy
Vila, G., Bonnet, A., Chauveau, F., Gaillard, S., Durand-Dubief, F., Pop, S., Ratiney, H.
Published in 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI) (18.04.2023)
Published in 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI) (18.04.2023)
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Conference Proceeding
Monte Carlo simulation on heterogeneous distributed systems: A computing framework with parallel merging and checkpointing strategies
Camarasu-Pop, Sorina, Glatard, Tristan, da Silva, Rafael Ferreira, Gueth, Pierre, Sarrut, David, Benoit-Cattin, Hugues
Published in Future generation computer systems (01.03.2013)
Published in Future generation computer systems (01.03.2013)
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Journal Article
Boutiques: a flexible framework to integrate command-line applications in computing platforms
Glatard, Tristan, Kiar, Gregory, Aumentado-Armstrong, Tristan, Beck, Natacha, Bellec, Pierre, Bernard, Rémi, Bonnet, Axel, Brown, Shawn T, Camarasu-Pop, Sorina, Cervenansky, Frédéric, Das, Samir, Ferreira da Silva, Rafael, Flandin, Guillaume, Girard, Pascal, Gorgolewski, Krzysztof J, Guttmann, Charles R G, Hayot-Sasson, Valérie, Quirion, Pierre-Olivier, Rioux, Pierre, Rousseau, Marc-Étienne, Evans, Alan C
Published in Gigascience (01.05.2018)
Published in Gigascience (01.05.2018)
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Journal Article
Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure
Commowick, Olivier, Istace, Audrey, Kain, Michael, Baptiste, Laurent, Leray, Florent, Mathieu, Simon, Camarasu-Pop, Sorina, Girard, Pascal, Roxana Am li, Jean-Christophe Ferr, Kerbrat, Anne, Tourdias, Thomas, Fr d ric Cervenansky, Glatard, Tristan, J r my Beaumont, Doyle, Senan, bes, Florence, Knight, Jesse, Khademi, April, Mahbod, Amirreza, Wang, Chunliang, Mckinley, Richard, Wagner, Franca, Muschelli, John, Sweeney, Elizabeth, Roura, Eloy, Llado, Xavier, Santos, Michel M, Santos, Wellington P, Silva-Filho, Abel G, Tomas-Fernandez, Xavier, H l ne Urien, Bloch, Isabelle, Valverde, Sergi, Cabezas, Mariano, Vera-Olmos, Francisco Javier, Malpica, Norberto, Guttmann, Charles, Vukusic, Sandra, Edan, Gilles, Dojat, Michel, Styner, Martin, Warfield, Simon K, Cotton, Francois, Barillot, Christian
Published in bioRxiv (13.07.2018)
Published in bioRxiv (13.07.2018)
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Paper
Dynamic Partitioning of GATE Monte-Carlo Simulations on EGEE
Camarasu-Pop, Sorina, Glatard, Tristan, Mościcki, Jakub T., Benoit-Cattin, Hugues, Sarrut, David
Published in Journal of grid computing (01.06.2010)
Published in Journal of grid computing (01.06.2010)
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Journal Article
Computational Reproducibility in Metabolite Quantification Applied to Short Echo Time in Vivo MR Spectroscopy
Vila, Gaël, Bonnet, Axel, Chauveau, Fabien, Gaillard, Sophie, Durand-Dubief, Françoise, Camarasu-Pop, Sorina, Ratiney, Helene
Year of Publication 09.03.2023
Year of Publication 09.03.2023
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Journal Article