Properties of MHC class I presented peptides that enhance immunogenicity
Calis, Jorg J A, Maybeno, Matt, Greenbaum, Jason A, Weiskopf, Daniela, De Silva, Aruna D, Sette, Alessandro, Keşmir, Can, Peters, Bjoern
Published in PLoS computational biology (01.10.2013)
Published in PLoS computational biology (01.10.2013)
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Characterizing immune repertoires by high throughput sequencing: strategies and applications
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Book Review
Complex Autoinflammatory Syndrome Unveils Fundamental Principles of JAK1 Kinase Transcriptional and Biochemical Function
Gruber, Conor N., Calis, Jorg J.A., Buta, Sofija, Evrony, Gilad, Martin, Jerome C., Uhl, Skyler A., Caron, Rachel, Jarchin, Lauren, Dunkin, David, Phelps, Robert, Webb, Bryn D., Saland, Jeffrey M., Merad, Miriam, Orange, Jordan S., Mace, Emily M., Rosenberg, Brad R., Gelb, Bruce D., Bogunovic, Dusan
Published in Immunity (Cambridge, Mass.) (15.09.2020)
Published in Immunity (Cambridge, Mass.) (15.09.2020)
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Journal Article
Human ADAR1 Prevents Endogenous RNA from Triggering Translational Shutdown
Chung, Hachung, Calis, Jorg J.A., Wu, Xianfang, Sun, Tony, Yu, Yingpu, Sarbanes, Stephanie L., Dao Thi, Viet Loan, Shilvock, Abigail R., Hoffmann, H.-Heinrich, Rosenberg, Brad R., Rice, Charles M.
Published in Cell (08.02.2018)
Published in Cell (08.02.2018)
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Journal Article
Cyclin F Controls Cell-Cycle Transcriptional Outputs by Directing the Degradation of the Three Activator E2Fs
Clijsters, Linda, Hoencamp, Claire, Calis, Jorg J.A., Marzio, Antonio, Handgraaf, Shanna M., Cuitino, Maria C., Rosenberg, Brad R., Leone, Gustavo, Pagano, Michele
Published in Molecular cell (20.06.2019)
Published in Molecular cell (20.06.2019)
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Journal Article
High-throughput epitope discovery reveals frequent recognition of neo-antigens by CD4+ T cells in human melanoma
Linnemann, Carsten, van Buuren, Marit M, Bies, Laura, Verdegaal, Els M E, Schotte, Remko, Calis, Jorg J A, Behjati, Sam, Velds, Arno, Hilkmann, Henk, Atmioui, Dris el, Visser, Marten, Stratton, Michael R, Haanen, John B A G, Spits, Hergen, van der Burg, Sjoerd H, Schumacher, Ton N M
Published in Nature medicine (01.01.2015)
Published in Nature medicine (01.01.2015)
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Journal Article
Predicted indirectly recognizable HLA epitopes presented by HLA-DR correlate with the de novo development of donor-specific HLA IgG antibodies after kidney transplantation
Otten, Henny G, Calis, Jorg J.A, Keşmir, Can, van Zuilen, Arjan D, Spierings, Eric
Published in Human immunology (01.03.2013)
Published in Human immunology (01.03.2013)
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Journal Article
Transcriptome of airway neutrophils reveals an interferon response in life-threatening respiratory syncytial virus infection
Besteman, Sjanna B., Callaghan, Amie, Langedijk, Annefleur C., Hennus, Marije P., Meyaard, Linde, Mokry, Michal, Bont, Louis J., Calis, Jorg J.A.
Published in Clinical immunology (Orlando, Fla.) (01.11.2020)
Published in Clinical immunology (Orlando, Fla.) (01.11.2020)
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Journal Article
Genome-wide association analysis in dilated cardiomyopathy reveals two new players in systolic heart failure on chromosomes 3p25.1 and 22q11.23
Garnier, Sophie, Harakalova, Magdalena, Weiss, Stefan, Mokry, Michal, Regitz-Zagrosek, Vera, Hengstenberg, Christian, Cappola, Thomas P, Isnard, Richard, Arbustini, Eloisa, Cook, Stuart A, van Setten, Jessica, Calis, Jorg J A, Hakonarson, Hakon, Morley, Michael P, Stark, Klaus, Prasad, Sanjay K, Li, Jin, O'Regan, Declan P, Grasso, Maurizia, Müller-Nurasyid, Martina, Meitinger, Thomas, Empana, Jean-Philippe, Strauch, Konstantin, Waldenberger, Melanie, Marguiles, Kenneth B, Seidman, Christine E, Kararigas, Georgios, Meder, Benjamin, Haas, Jan, Boutouyrie, Pierre, Lacolley, Patrick, Jouven, Xavier, Erdmann, Jeanette, Blankenberg, Stefan, Wichter, Thomas, Ruppert, Volker, Tavazzi, Luigi, Dubourg, Olivier, Roizes, Gérard, Dorent, Richard, de Groote, Pascal, Fauchier, Laurent, Trochu, Jean-Noël, Aupetit, Jean-François, Bilinska, Zofia T, Germain, Marine, Völker, Uwe, Hemerich, Daiane, Raji, Ibticem, Bacq-Daian, Delphine, Proust, Carole, Remior, Paloma, Gomez-Bueno, Manuel, Lehnert, Kristin, Maas, Renee, Olaso, Robert, Saripella, Ganapathi Varma, Felix, Stephan B, McGinn, Steven, Duboscq-Bidot, Laëtitia, van Mil, Alain, Besse, Céline, Fontaine, Vincent, Blanché, Hélène, Ader, Flavie, Keating, Brendan, Curjol, Angélique, Boland, Anne, Komajda, Michel, Cambien, François, Deleuze, Jean-François, Dörr, Marcus, Asselbergs, Folkert W, Villard, Eric, Trégouët, David-Alexandre, Charron, Philippe
Published in European heart journal (21.05.2021)
Published in European heart journal (21.05.2021)
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Recombinant Interleukin‐1 Receptor Antagonist Is an Effective First‐Line Treatment Strategy in New‐Onset Systemic Juvenile Idiopathic Arthritis, Irrespective of HLA‐DRB1 Background and IL1RN Variants
Erkens, Remco G. A., Calis, Jorg J. A., Verwoerd, Anouk, De Roock, Sytze, Ter Haar, Nienke M., Den Engelsman, Gerda, Van der Veken, Lars T., Ernst, Robert F., Van Deutekom, Hanneke W. M., Pickering, Alex, Scholman, Rianne C., Jansen, Marc H. A., Swart, Joost F., Sinha, Rashmi, Roth, Johannes, Schulert, Grant S., Grom, Alexei A., Van Loosdregt, Jorg, Vastert, Sebastiaan J.
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.01.2024)
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.01.2024)
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Developmental programming in human umbilical cord vein endothelial cells following fetal growth restriction
Terstappen, Fieke, Calis, Jorg J A, Paauw, Nina D, Joles, Jaap A, van Rijn, Bas B, Mokry, Michal, Plösch, Torsten, Lely, A Titia
Published in Clinical epigenetics (30.11.2020)
Published in Clinical epigenetics (30.11.2020)
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Journal Article
Human Plaque Myofibroblasts to Study Mechanisms of Atherosclerosis
Buono, Michele F, Benavente, Ernest Diez, Slenders, Lotte, Methorst, Daisey, Tessels, Daniëlle, Mili, Eloi, Finger, Roxy, Kapteijn, Daniek, Daniels, Mark, van den Dungen, Noortje A M, Calis, Jorg J A, Mol, Barend M, de Borst, Gert J, de Kleijn, Dominique P V, Pasterkamp, Gerard, den Ruijter, Hester M, Mokry, Michal
Published in Journal of the American Heart Association (07.11.2023)
Published in Journal of the American Heart Association (07.11.2023)
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Journal Article
N6-methyladenosine promotes TNF mRNA degradation in CD4+ T lymphocytes
van Vroonhoven, Ellen C N, Picavet, Lucas W, Scholman, Rianne C, Sijbers, Lyanne J P M, Kievit, Corlinda R E, van den Dungen, Noortje A M, Mokry, Michal, Evers, Anouk, Lebbink, Robert J, Mocholi, Enric, Coffer, Paul J, Calis, Jorg J A, Vastert, Sebastiaan J, van Loosdregt, Jorg
Published in Journal of leukocyte biology (01.10.2024)
Published in Journal of leukocyte biology (01.10.2024)
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Journal Article
Exploratory Study of Predicted Indirectly ReCognizable HLA Epitopes in Mismatched Hematopoietic Cell Transplantations
Geneugelijk, Kirsten, Thus, Kirsten A, van Deutekom, Hanneke W M, Calis, Jorg J A, Borst, Eric, Keşmir, Can, Oudshoorn, Machteld, van der Holt, Bronno, Meijer, Ellen, Zeerleder, Sacha, de Groot, Marco R, von dem Borne, Peter A, Schaap, Nicolaas, Cornelissen, Jan, Kuball, Jürgen, Spierings, Eric
Published in Frontiers in immunology (24.04.2019)
Published in Frontiers in immunology (24.04.2019)
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Journal Article
MHC class I molecules exploit the low G+C content of pathogen genomes for enhanced presentation
Calis, Jorg J.A, Sanchez-Perez, Gabino F, Keşmir, Can
Published in European journal of immunology (01.10.2010)
Published in European journal of immunology (01.10.2010)
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Journal Article
N 6 -Methyladenosine Directly Regulates CD40L Expression in CD4 + T Lymphocytes
van Vroonhoven, Ellen C N, Picavet, Lucas W, Scholman, Rianne C, van den Dungen, Noortje A M, Mokry, Michal, Evers, Anouk, Lebbink, Robert J, Calis, Jorg J A, Vastert, Sebastiaan J, van Loosdregt, Jorg
Published in Biology (Basel, Switzerland) (14.07.2023)
Published in Biology (Basel, Switzerland) (14.07.2023)
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