Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato
Alonge, Michael, Wang, Xingang, Benoit, Matthias, Soyk, Sebastian, Pereira, Lara, Zhang, Lei, Suresh, Hamsini, Ramakrishnan, Srividya, Maumus, Florian, Ciren, Danielle, Levy, Yuval, Harel, Tom Hai, Shalev-Schlosser, Gili, Amsellem, Ziva, Razifard, Hamid, Caicedo, Ana L., Tieman, Denise M., Klee, Harry, Kirsche, Melanie, Aganezov, Sergey, Ranallo-Benavidez, T. Rhyker, Lemmon, Zachary H., Kim, Jennifer, Robitaille, Gina, Kramer, Melissa, Goodwin, Sara, McCombie, W. Richard, Hutton, Samuel, Van Eck, Joyce, Gillis, Jesse, Eshed, Yuval, Sedlazeck, Fritz J., van der Knaap, Esther, Schatz, Michael C., Lippman, Zachary B.
Published in Cell (09.07.2020)
Published in Cell (09.07.2020)
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Genomic Evidence for Complex Domestication History of the Cultivated Tomato in Latin America
Razifard, Hamid, Ramos, Alexis, Della Valle, Audrey L, Bodary, Cooper, Goetz, Erika, Manser, Elizabeth J, Li, Xiang, Zhang, Lei, Visa, Sofia, Tieman, Denise, van der Knaap, Esther, Caicedo, Ana L
Published in Molecular biology and evolution (01.04.2020)
Published in Molecular biology and evolution (01.04.2020)
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Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure
Gordon, Sean P., Contreras-Moreira, Bruno, Woods, Daniel P., Des Marais, David L., Burgess, Diane, Shu, Shengqiang, Stritt, Christoph, Roulin, Anne C., Schackwitz, Wendy, Tyler, Ludmila, Martin, Joel, Lipzen, Anna, Dochy, Niklas, Phillips, Jeremy, Barry, Kerrie, Geuten, Koen, Budak, Hikmet, Juenger, Thomas E., Amasino, Richard, Caicedo, Ana L., Goodstein, David, Davidson, Patrick, Mur, Luis A. J., Figueroa, Melania, Freeling, Michael, Catalan, Pilar, Vogel, John P.
Published in Nature communications (19.12.2017)
Published in Nature communications (19.12.2017)
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All roads lead to weediness: Patterns of genomic divergence reveal extensive recurrent weedy rice origins from South Asian Oryza
Huang, Zhongyun, Young, Nelson D., Reagon, Michael, Hyma, Katie E., Olsen, Kenneth M., Jia, Yulin, Caicedo, Ana L.
Published in Molecular ecology (01.06.2017)
Published in Molecular ecology (01.06.2017)
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Impact of Herbicide-Resistant Rice Technology on Phenotypic Diversity and Population Structure of United States Weedy Rice
Burgos, Nilda Roma, Singh, Vijay, Tseng, Te Ming, Black, Howard, Young, Nelson D, Huang, Zhongyun, Hyma, Katie E, Gealy, David R, Caicedo, Ana L
Published in Plant physiology (Bethesda) (01.11.2014)
Published in Plant physiology (Bethesda) (01.11.2014)
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Extent of Linkage Disequilibrium in Rice (Oryza sativa L.)
Mather, K.A, Caicedo, A.L, Polato, N.R, Olsen, K.M, McCouch, S, Purugganan, M.D
Published in Genetics (Austin) (01.12.2007)
Published in Genetics (Austin) (01.12.2007)
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Call of the wild rice: Oryza rufipogon shapes weedy rice evolution in Southeast Asia
Vigueira, Cynthia C., Qi, Xinshuai, Song, Beng‐Kah, Li, Lin‐Feng, Caicedo, Ana L., Jia, Yulin, Olsen, Kenneth M.
Published in Evolutionary applications (01.01.2019)
Published in Evolutionary applications (01.01.2019)
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Brachypodium as a model for the grasses: today and the future
Brkljacic, Jelena, Grotewold, Erich, Scholl, Randy, Mockler, Todd, Garvin, David F, Vain, Philippe, Brutnell, Thomas, Sibout, Richard, Bevan, Michael, Budak, Hikmet, Caicedo, Ana L, Gao, Caixia, Gu, Yong, Hazen, Samuel P, Holt, Ben F. III, Vogel, John P
Published in Plant physiology (Bethesda) (01.09.2011)
Published in Plant physiology (Bethesda) (01.09.2011)
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Epistatic interaction between Arabidopsis FRI and FLC flowering time genes generates a latitudinal cline in a life history trait
Caicedo, A.L, Stinchcombe, J.R, Olsen, K.M, Schmitt, J, Purugganan, M.D
Published in Proceedings of the National Academy of Sciences - PNAS (02.11.2004)
Published in Proceedings of the National Academy of Sciences - PNAS (02.11.2004)
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Genome-wide patterns of nucleotide polymorphism in domesticated rice
Caicedo, Ana L, Williamson, Scott H, Hernandez, Ryan D, Boyko, Adam, Fledel-Alon, Adi, York, Thomas L, Polato, Nicholas R, Olsen, Kenneth M, Nielsen, Rasmus, McCouch, Susan R, Bustamante, Carlos D, Purugganan, Michael D
Published in PLoS genetics (01.09.2007)
Published in PLoS genetics (01.09.2007)
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Simulation and Exergoeconomic Analysis of a Trigeneration System Based on Biofuels from Spent Coffee Grounds
Tinoco Caicedo, Diana L., Santos Torres, Myrian, Mero-Benavides, Medelyne, Patiño Lopez, Oscar, Lozano Medina, Alexis, Blanco Marigorta, Ana M.
Published in Energies (Basel) (01.02.2023)
Published in Energies (Basel) (01.02.2023)
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Selection Under Domestication: Evidence for a Sweep in the Rice Waxy Genomic Region
Olsen, Kenneth M, Caicedo, Ana L, Polato, Nicholas, McClung, Anna, McCouch, Susan, Purugganan, Michael D
Published in Genetics (Austin) (01.06.2006)
Published in Genetics (Austin) (01.06.2006)
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Molecular evolution of shattering loci in U.S. weedy rice
Thurber, Carrie S, Reagon, Michael, Gross, Briana L, Olsen, Kenneth M, Jia, Yulin, Caicedo, Ana L
Published in Molecular ecology (01.08.2010)
Published in Molecular ecology (01.08.2010)
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Genomic patterns of nucleotide diversity in divergent populations of U.S. weedy rice
Reagon, Michael, Thurber, Carrie S, Gross, Briana L, Olsen, Kenneth M, Jia, Yulin, Caicedo, Ana L
Published in BMC evolutionary biology (15.06.2010)
Published in BMC evolutionary biology (15.06.2010)
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QTL Analysis for Resistance to Blast Disease in U.S. Weedy Rice
Liu, Yan, Qi, Xinshuai, Gealy, Dave R, Olsen, Kenneth M, Caicedo, Ana L, Jia, Yulin
Published in Molecular plant-microbe interactions (01.07.2015)
Published in Molecular plant-microbe interactions (01.07.2015)
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Kidney transplantation for end-stage renal disease in lupus nephritis, a very safe procedure: a single Latin American transplant center experience
Naranjo-Escobar, J, Manzi, E, Posada, J G, Mesa, L, Echeverri, G J, Duran, C, Schweneiberg, J, Caicedo, L A, Villegas, J I, Tobón, G J
Published in Lupus (01.10.2017)
Published in Lupus (01.10.2017)
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