Search Results - "Caaveiro, Jose M. M." :: K.UTB vyhledávací portál | TBU Library Retrieval Portal

Selective and reversible modification of kinase cysteines with chlorofluoroacetamides

Selective and reversible modification of kinase cysteines with chlorofluoroacetamides

by Shindo, Naoya, Fuchida, Hirokazu, Sato, Mami, Watari, Kosuke, Shibata, Tomohiro, Kuwata, Keiko, Miura, Chizuru, Okamoto, Kei, Hatsuyama, Yuji, Tokunaga, Keisuke, Sakamoto, Seiichi, Morimoto, Satoshi, Abe, Yoshito, Shiroishi, Mitsunori, Caaveiro, Jose M M, Ueda, Tadashi, Tamura, Tomonori, Matsunaga, Naoya, Nakao, Takaharu, Koyanagi, Satoru, Ohdo, Shigehiro, Yamaguchi, Yasuchika, Hamachi, Itaru, Ono, Mayumi, Ojida, Akio
Published in Nature chemical biology (01.03.2019)

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Affinity improvement of a therapeutic antibody by structure-based computational design: generation of electrostatic interactions in the transition state stabilizes the antibody-antigen complex

Affinity improvement of a therapeutic antibody by structure-based computational design: generation of electrostatic interactions in the transition state stabilizes the antibody-antigen complex

by Kiyoshi, Masato, Caaveiro, Jose M M, Miura, Eri, Nagatoishi, Satoru, Nakakido, Makoto, Soga, Shinji, Shirai, Hiroki, Kawabata, Shigeki, Tsumoto, Kouhei
Published in PloS one (27.01.2014)

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Structural basis for the recognition of human hemoglobin by the heme-acquisition protein Shr from Streptococcus pyogenes

Structural basis for the recognition of human hemoglobin by the heme-acquisition protein Shr from Streptococcus pyogenes

by Senoo, Akinobu, Hoshino, Masato, Shiomi, Toshiki, Nakakido, Makoto, Nagatoishi, Satoru, Kuroda, Daisuke, Nakagawa, Ichiro, Tame, Jeremy R H, Caaveiro, Jose M M, Tsumoto, Kouhei
Published in Scientific reports (05.03.2024)

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Structural analysis of Fc/FcγR complexes: a blueprint for antibody design

Structural analysis of Fc/FcγR complexes: a blueprint for antibody design

by Caaveiro, Jose M. M., Kiyoshi, Masato, Tsumoto, Kouhei
Published in Immunological reviews (01.11.2015)

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Discovery and Optimization of Inhibitors of the Parkinson’s Disease Associated Protein DJ‑1

Discovery and Optimization of Inhibitors of the Parkinson’s Disease Associated Protein DJ‑1

by Tashiro, Shinya, Caaveiro, Jose M. M, Nakakido, Makoto, Tanabe, Aki, Nagatoishi, Satoru, Tamura, Yasushi, Matsuda, Noriyuki, Liu, Dali, Hoang, Quyen Q, Tsumoto, Kouhei
Published in ACS chemical biology (21.09.2018)

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Bidirectional Transformation of a Metamorphic Protein between the Water-Soluble and Transmembrane Native States

Bidirectional Transformation of a Metamorphic Protein between the Water-Soluble and Transmembrane Native States

by Tanaka, Koji, Caaveiro, Jose M. M, Tsumoto, Kouhei
Published in Biochemistry (Easton) (24.11.2015)

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Haemolytic actinoporins interact with carbohydrates using their lipid-binding module

Haemolytic actinoporins interact with carbohydrates using their lipid-binding module

by Tanaka, Koji, Caaveiro, Jose M. M., Morante, Koldo, Tsumoto, Kouhei
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (05.08.2017)

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Molecular basis for thermal stability and affinity in a VHH: Contribution of the framework region and its influence in the conformation of the CDR3

Molecular basis for thermal stability and affinity in a VHH: Contribution of the framework region and its influence in the conformation of the CDR3

by Kinoshita, Seisho, Nakakido, Makoto, Mori, Chinatsu, Kuroda, Daisuke, Caaveiro, Jose M.M., Tsumoto, Kouhei
Published in Protein science (01.11.2022)

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Glycosylation of IgG-Fc: a molecular perspective

Glycosylation of IgG-Fc: a molecular perspective

by Kiyoshi, Masato, Tsumoto, Kouhei, Ishii-Watabe, Akiko, Caaveiro, Jose M M
Published in International immunology (01.07.2017)

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Tyrosine Sulfation Restricts the Conformational Ensemble of a Flexible Peptide, Strengthening the Binding Affinity for an Antibody

Tyrosine Sulfation Restricts the Conformational Ensemble of a Flexible Peptide, Strengthening the Binding Affinity for an Antibody

by Miyanabe, Kazuhiro, Yamashita, Takefumi, Abe, Yoshito, Akiba, Hiroki, Takamatsu, Yuichiro, Nakakido, Makoto, Hamakubo, Takao, Ueda, Tadashi, Caaveiro, Jose M. M, Tsumoto, Kouhei
Published in Biochemistry (Easton) (17.07.2018)

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Differential Effect of Membrane Composition on the Pore-Forming Ability of Four Different Sea Anemone Actinoporins

Differential Effect of Membrane Composition on the Pore-Forming Ability of Four Different Sea Anemone Actinoporins

by García-Linares, Sara, Rivera-de-Torre, Esperanza, Morante, Koldo, Tsumoto, Kouhei, Caaveiro, Jose M. M, Gavilanes, José G, Slotte, J. Peter, Martínez-del-Pozo, Álvaro
Published in Biochemistry (Easton) (06.12.2016)

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Discovery of Chlorofluoroacetamide-Based Covalent Inhibitors for Severe Acute Respiratory Syndrome Coronavirus 2 3CL Protease

Discovery of Chlorofluoroacetamide-Based Covalent Inhibitors for Severe Acute Respiratory Syndrome Coronavirus 2 3CL Protease

by Hirose, Yuya, Shindo, Naoya, Mori, Makiko, Onitsuka, Satsuki, Isogai, Hikaru, Hamada, Rui, Hiramoto, Tadanari, Ochi, Jinta, Takahashi, Daisuke, Ueda, Tadashi, Caaveiro, Jose M. M., Yoshida, Yuya, Ohdo, Shigehiro, Matsunaga, Naoya, Toba, Shinsuke, Sasaki, Michihito, Orba, Yasuko, Sawa, Hirofumi, Sato, Akihiko, Kawanishi, Eiji, Ojida, Akio
Published in Journal of medicinal chemistry (27.10.2022)

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Structural and Thermodynamic Basis of Epitope Binding by Neutralizing and Nonneutralizing Forms of the Anti-HIV-1 Antibody 4E10

Structural and Thermodynamic Basis of Epitope Binding by Neutralizing and Nonneutralizing Forms of the Anti-HIV-1 Antibody 4E10

by Rujas, Edurne, Gulzar, Naveed, Morante, Koldo, Tsumoto, Kouhei, Scott, Jamie K, Nieva, José L, Caaveiro, Jose M M
Published in Journal of virology (01.12.2015)

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Ca2+‐induced structural changes and intramolecular interactions in N‐terminal region of diacylglycerol kinase alpha

Ca2+‐induced structural changes and intramolecular interactions in N‐terminal region of diacylglycerol kinase alpha

by Takahashi, Daisuke, Yonezawa, Kento, Okizaki, Yuki, Caaveiro, Jose M. M., Ueda, Tadashi, Shimada, Atsushi, Sakane, Fumio, Shimizu, Nobutaka
Published in Protein science (01.07.2022)

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Heme Binding Mechanism of Structurally Similar Iron-Regulated Surface Determinant Near Transporter Domains of Staphylococcus aureus Exhibiting Different Affinities for Heme

Heme Binding Mechanism of Structurally Similar Iron-Regulated Surface Determinant Near Transporter Domains of Staphylococcus aureus Exhibiting Different Affinities for Heme

by Moriwaki, Yoshitaka, Terada, Tohru, Caaveiro, Jose M. M, Takaoka, Yousuke, Hamachi, Itaru, Tsumoto, Kouhei, Shimizu, Kentaro
Published in Biochemistry (Easton) (10.12.2013)

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Computer-guided library generation applied to the optimization of single-domain antibodies

Computer-guided library generation applied to the optimization of single-domain antibodies

by Akiba, Hiroki, Tamura, Hiroko, Caaveiro, Jose M M, Tsumoto, Kouhei
Published in Protein engineering, design and selection (31.12.2019)

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Testing Geometrical Discrimination within an Enzyme Active Site: Constrained Hydrogen Bonding in the Ketosteroid Isomerase Oxyanion Hole

Testing Geometrical Discrimination within an Enzyme Active Site: Constrained Hydrogen Bonding in the Ketosteroid Isomerase Oxyanion Hole

by Sigala, Paul A, Kraut, Daniel A, Caaveiro, Jose M. M, Pybus, Brandon, Ruben, Eliza A, Ringe, Dagmar, Petsko, Gregory A, Herschlag, Daniel
Published in Journal of the American Chemical Society (15.10.2008)

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Molecular recognition of a membrane-anchored HIV-1 pan-neutralizing epitope

Molecular recognition of a membrane-anchored HIV-1 pan-neutralizing epitope

by Torralba, Johana, de la Arada, Igor, Partida-Hanon, Angélica, Rujas, Edurne, Arribas, Madalen, Insausti, Sara, Valotteau, Claire, Valle, Javier, Andreu, David, Caaveiro, José M M, Jiménez, María Angeles, Apellániz, Beatriz, Redondo-Morata, Lorena, Nieva, José L
Published in Communications biology (18.11.2022)

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Molecular Basis of Recognition of Antibacterial Porphyrins by Heme-Transporter IsdH-NEAT3 of Staphylococcus aureus

Molecular Basis of Recognition of Antibacterial Porphyrins by Heme-Transporter IsdH-NEAT3 of Staphylococcus aureus

by Moriwaki, Yoshitaka, Caaveiro, Jose M. M, Tanaka, Yoshikazu, Tsutsumi, Hiroshi, Hamachi, Itaru, Tsumoto, Kouhei
Published in Biochemistry (Easton) (30.08.2011)

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Unfolding is the driving force for mitochondrial import and degradation of the Parkinson's disease-related protein DJ-1

Unfolding is the driving force for mitochondrial import and degradation of the Parkinson's disease-related protein DJ-1

by Queliconi, Bruno Barros, Kojima, Waka, Kimura, Mayumi, Imai, Kenichiro, Udagawa, Chisato, Motono, Chie, Hirokawa, Takatsugu, Tashiro, Shinya, Caaveiro, Jose M M, Tsumoto, Kouhei, Yamano, Koji, Tanaka, Keiji, Matsuda, Noriyuki
Published in Journal of cell science (15.11.2021)

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