SwissParam: A fast force field generation tool for small organic molecules
Zoete, Vincent, Cuendet, Michel A., Grosdidier, Aurélien, Michielin, Olivier
Published in Journal of computational chemistry (01.08.2011)
Published in Journal of computational chemistry (01.08.2011)
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Journal Article
Truly privacy-preserving federated analytics for precision medicine with multiparty homomorphic encryption
Froelicher, David, Troncoso-Pastoriza, Juan R., Raisaro, Jean Louis, Cuendet, Michel A., Sousa, Joao Sa, Cho, Hyunghoon, Berger, Bonnie, Fellay, Jacques, Hubaux, Jean-Pierre
Published in Nature communications (11.10.2021)
Published in Nature communications (11.10.2021)
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Journal Article
Implementation of the CHARMM Force Field in GROMACS: Analysis of Protein Stability Effects from Correction Maps, Virtual Interaction Sites, and Water Models
Bjelkmar, Pär, Larsson, Per, Cuendet, Michel A, Hess, Berk, Lindahl, Erik
Published in Journal of chemical theory and computation (09.02.2010)
Published in Journal of chemical theory and computation (09.02.2010)
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Journal Article
Allosteric Mechanisms of Molecular Machines at the Membrane: Transport by Sodium-Coupled Symporters
LeVine, Michael V, Cuendet, Michel A, Khelashvili, George, Weinstein, Harel
Published in Chemical reviews (08.06.2016)
Published in Chemical reviews (08.06.2016)
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Journal Article
Free Energy Reconstruction from Metadynamics or Adiabatic Free Energy Dynamics Simulations
Cuendet, Michel A, Tuckerman, Mark E
Published in Journal of chemical theory and computation (12.08.2014)
Published in Journal of chemical theory and computation (12.08.2014)
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Journal Article
Transport domain unlocking sets the uptake rate of an aspartate transporter
Akyuz, Nurunisa, Georgieva, Elka R., Zhou, Zhou, Stolzenberg, Sebastian, Cuendet, Michel A., Khelashvili, George, Altman, Roger B., Terry, Daniel S., Freed, Jack H., Weinstein, Harel, Boudker, Olga, Blanchard, Scott C.
Published in Nature (London) (05.02.2015)
Published in Nature (London) (05.02.2015)
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Journal Article
Heating and flooding: a unified approach for rapid generation of free energy surfaces
Chen, Ming, Cuendet, Michel A, Tuckerman, Mark E
Published in The Journal of chemical physics (14.07.2012)
Published in The Journal of chemical physics (14.07.2012)
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Journal Article
Author Correction: Truly privacy-preserving federated analytics for precision medicine with multiparty homomorphic encryption
Froelicher, David, Troncoso-Pastoriza, Juan R., Raisaro, Jean Louis, Cuendet, Michel A., Sousa, Joao Sa, Cho, Hyunghoon, Berger, Bonnie, Fellay, Jacques, Hubaux, Jean-Pierre
Published in Nature communications (11.11.2021)
Published in Nature communications (11.11.2021)
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Journal Article
Interactive process mining of cancer treatment sequences with melanoma real-world data
Wicky, Alexandre, Gatta, Roberto, Latifyan, Sofiya, Micheli, Rita De, Gerard, Camille, Pradervand, Sylvain, Michielin, Olivier, Cuendet, Michel A
Published in Frontiers in oncology (21.03.2023)
Published in Frontiers in oncology (21.03.2023)
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Journal Article
Unusual mode of dimerization of retinitis pigmentosa-associated F220C rhodopsin
Khelashvili, George, Pillai, Anoop Narayana, Lee, Joon, Pandey, Kalpana, Payne, Alexander M., Siegel, Zarek, Cuendet, Michel A., Lewis, Tylor R., Arshavsky, Vadim Y., Broichhagen, Johannes, Levitz, Joshua, Menon, Anant K.
Published in Scientific reports (18.05.2021)
Published in Scientific reports (18.05.2021)
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Journal Article
A differential process mining analysis of COVID-19 management for cancer patients
Cuendet, Michel A, Gatta, Roberto, Wicky, Alexandre, Gerard, Camille L, Dalla-Vale, Margaux, Tavazzi, Erica, Michielin, Grégoire, Delyon, Julie, Ferahta, Nabila, Cesbron, Julien, Lofek, Sébastien, Huber, Alexandre, Jankovic, Jeremy, Demicheli, Rita, Bouchaab, Hasna, Digklia, Antonia, Obeid, Michel, Peters, Solange, Eicher, Manuela, Pradervand, Sylvain, Michielin, Olivier
Published in Frontiers in oncology (07.12.2022)
Published in Frontiers in oncology (07.12.2022)
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Journal Article
Modeling tumor size dynamics based on real‐world electronic health records and image data in advanced melanoma patients receiving immunotherapy
Courlet, Perrine, Abler, Daniel, Guidi, Monia, Girard, Pascal, Amato, Federico, Vietti Violi, Naik, Dietz, Matthieu, Guignard, Nicolas, Wicky, Alexandre, Latifyan, Sofiya, De Micheli, Rita, Jreige, Mario, Dromain, Clarisse, Csajka, Chantal, Prior, John O., Venkatakrishnan, Karthik, Michielin, Olivier, Cuendet, Michel A., Terranova, Nadia
Published in CPT: pharmacometrics and systems pharmacology (01.08.2023)
Published in CPT: pharmacometrics and systems pharmacology (01.08.2023)
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Journal Article
What Role Can Process Mining Play in Recurrent Clinical Guidelines Issues? A Position Paper
Gatta, Roberto, Vallati, Mauro, Fernandez-Llatas, Carlos, Martinez-Millana, Antonio, Orini, Stefania, Sacchi, Lucia, Lenkowicz, Jacopo, Marcos, Mar, Munoz-Gama, Jorge, Cuendet, Michel A, de Bari, Berardino, Marco-Ruiz, Luis, Stefanini, Alessandro, Valero-Ramon, Zoe, Michielin, Olivier, Lapinskas, Tomas, Montvila, Antanas, Martin, Niels, Tavazzi, Erica, Castellano, Maurizio
Published in International journal of environmental research and public health (11.09.2020)
Published in International journal of environmental research and public health (11.09.2020)
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Journal Article
Turning tumors from cold to inflamed to improve immunotherapy response
Gerard, C.L., Delyon, J., Wicky, A., Homicsko, K., Cuendet, Michel A., Michielin, O.
Published in Cancer treatment reviews (01.12.2021)
Published in Cancer treatment reviews (01.12.2021)
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Journal Article
The Allostery Landscape: Quantifying Thermodynamic Couplings in Biomolecular Systems
Cuendet, Michel A, Weinstein, Harel, LeVine, Michael V
Published in Journal of chemical theory and computation (13.12.2016)
Published in Journal of chemical theory and computation (13.12.2016)
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Journal Article