metagenetic approach to determine the diversity and distribution of cyst nematodes at the level of the country, the field and the individual
Eves‐van den Akker, Sebastian, Lilley, Catherine J, Reid, Alex, Pickup, Jon, Anderson, Eric, Cock, Peter J.A, Blaxter, Mark, Urwin, Peter E, Jones, John T, Blok, Vivian C
Published in Molecular ecology (01.12.2015)
Published in Molecular ecology (01.12.2015)
Get full text
Journal Article
The 21st annual Bioinformatics Open Source Conference (BOSC 2020, part of BCC2020) [version 1; peer review: not peer reviewed]
Harris, Nomi L, Cock, Peter J.A, Fields, Christopher J, Hokamp, Karsten, Maia, Jessica, Munoz-Torres, Monica, Taschuk, Morgan, Yehudi, Yo
Published in F1000 research (2020)
Published in F1000 research (2020)
Get full text
Journal Article
BOSC 2019, the 20th annual Bioinformatics Open Source Conference [version 1; peer review: not peer reviewed]
Harris, Nomi L, Cock, Peter J.A, Fields, Christopher J, Greshake Tzovaras, Bastian, Heuer, Michael, Hokamp, Karsten, Munoz-Torres, Monica, Peltzer, Alexander, Rieck, Bastian, Wiencko, Heather, Yehudi, Yo
Published in F1000 research (2019)
Published in F1000 research (2019)
Get full text
Journal Article
The 2018 Bioinformatics Open Source Conference (GCCBOSC 2018) [version 1; peer review: not peer reviewed]
Harris, Nomi L, Wiencko, Heather, Chapman, Brad, Cock, Peter J.A, Hokamp, Karsten, Lapp, Hilmar, Fields, Chris, Greshake Tzovaras, Bastian
Published in F1000 research (2018)
Published in F1000 research (2018)
Get full text
Journal Article
Conference Proceeding
Gene expression changes in diapause or quiescent potato cyst nematode, Globodera pallida, eggs after hydration or exposure to tomato root diffusate
Palomares-Rius, Juan Emilio, Hedley, Pete, Cock, Peter J A, Morris, Jenny A, Jones, John T, Blok, Vivian C
Published in PeerJ (San Francisco, CA) (04.02.2016)
Published in PeerJ (San Francisco, CA) (04.02.2016)
Get full text
Journal Article
The 2016 Bioinformatics Open Source Conference (BOSC) [version 1; peer review: not peer reviewed]
Harris, Nomi L, Cock, Peter J.A, Chapman, Brad, Fields, Christopher J, Hokamp, Karsten, Lapp, Hilmar, Muñoz-Torres, Monica, Wiencko, Heather
Published in F1000 research (2016)
Published in F1000 research (2016)
Get full text
Journal Article
Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus
Kikuchi, Taisei, Cotton, James A, Dalzell, Jonathan J, Hasegawa, Koichi, Kanzaki, Natsumi, McVeigh, Paul, Takanashi, Takuma, Tsai, Isheng J, Assefa, Samuel A, Cock, Peter J A, Otto, Thomas Dan, Hunt, Martin, Reid, Adam J, Sanchez-Flores, Alejandro, Tsuchihara, Kazuko, Yokoi, Toshiro, Larsson, Mattias C, Miwa, Johji, Maule, Aaron G, Sahashi, Norio, Jones, John T, Berriman, Matthew
Published in PLoS pathogens (01.09.2011)
Published in PLoS pathogens (01.09.2011)
Get full text
Journal Article
Identification and functional characterization of effectors in expressed sequence tags from various life cycle stages of the potato cyst nematode Globodera pallida
JONES, JOHN T, KUMAR, AMAR, PYLYPENKO, LILIYA A, THIRUGNANASAMBANDAM, AMARNATH, CASTELLI, LYDIA, CHAPMAN, SEAN, COCK, PETER J.A, GRENIER, ERIC, LILLEY, CATHERINE J, PHILLIPS, MARK S, BLOK, VIVIAN C
Published in Molecular plant pathology (01.11.2009)
Published in Molecular plant pathology (01.11.2009)
Get full text
Journal Article
Characterisation of the transcriptome of Aphelenchoides besseyi and identification of a GHF 45 cellulase
Kikuchi, Tiasei, Cock, Peter J.A, Helder, Johannes, Jones, John T
Published in Nematology : international journal of fundamental and applied nematological research (2014)
Published in Nematology : international journal of fundamental and applied nematological research (2014)
Get full text
Journal Article
Using Tablet for visual exploration of second-generation sequencing data
Milne, Iain, Stephen, Gordon, Bayer, Micha, Cock, Peter J A, Pritchard, Leighton, Cardle, Linda, Shaw, Paul D, Marshall, David
Published in Briefings in bioinformatics (01.03.2013)
Published in Briefings in bioinformatics (01.03.2013)
Get full text
Journal Article
Biopython: freely available Python tools for computational molecular biology and bioinformatics
Cock, Peter J. A., Antao, Tiago, Chang, Jeffrey T., Chapman, Brad A., Cox, Cymon J., Dalke, Andrew, Friedberg, Iddo, Hamelryck, Thomas, Kauff, Frank, Wilczynski, Bartek, de Hoon, Michiel J. L.
Published in Bioinformatics (01.06.2009)
Published in Bioinformatics (01.06.2009)
Get full text
Journal Article
NCBI BLAST+ integrated into Galaxy
Cock, Peter J A, Chilton, John M, Grüning, Björn, Johnson, James E, Soranzo, Nicola
Published in Gigascience (25.08.2015)
Published in Gigascience (25.08.2015)
Get full text
Journal Article
The Planemo toolkit for developing, deploying, and executing scientific data analyses in Galaxy and beyond
Bray, Simon, Chilton, John, Bernt, Matthias, Soranzo, Nicola, van den Beek, Marius, Batut, Bérénice, Rasche, Helena, Čech, Martin, Cock, Peter J A, Grüning, Björn, Nekrutenko, Anton
Published in Genome research (01.02.2023)
Published in Genome research (01.02.2023)
Get full text
Journal Article
The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence
Eves-van den Akker, Sebastian, Laetsch, Dominik R, Thorpe, Peter, Lilley, Catherine J, Danchin, Etienne G J, Da Rocha, Martine, Rancurel, Corinne, Holroyd, Nancy E, Cotton, James A, Szitenberg, Amir, Grenier, Eric, Montarry, Josselin, Mimee, Benjamin, Duceppe, Marc-Olivier, Boyes, Ian, Marvin, Jessica M C, Jones, Laura M, Yusup, Hazijah B, Lafond-Lapalme, Joël, Esquibet, Magali, Sabeh, Michael, Rott, Michael, Overmars, Hein, Finkers-Tomczak, Anna, Smant, Geert, Koutsovoulos, Georgios, Blok, Vivian, Mantelin, Sophie, Cock, Peter J A, Phillips, Wendy, Henrissat, Bernard, Urwin, Peter E, Blaxter, Mark, Jones, John T
Published in Genome Biology (10.06.2016)
Published in Genome Biology (10.06.2016)
Get full text
Journal Article
Identification and characterization of parasitism genes from the pinewood nematode Bursaphelenchus xylophilus reveals a multilayered detoxification strategy
Espada, Margarida, Silva, Ana Cláudia, Eves van den Akker, Sebastian, Cock, Peter J. A., Mota, Manuel, Jones, John T.
Published in Molecular plant pathology (01.02.2016)
Published in Molecular plant pathology (01.02.2016)
Get full text
Journal Article