Lactate induces metabolic and epigenetic reprogramming of pro‐inflammatory Th17 cells
Lopez Krol, Aleksandra, Nehring, Hannah P, Krause, Felix F, Wempe, Anne, Raifer, Hartmann, Nist, Andrea, Stiewe, Thorsten, Bertrams, Wilhelm, Schmeck, Bernd, Luu, Maik, Leister, Hanna, Chung, Ho‐Ryun, Bauer, Uta‐Maria, Adhikary, Till, Visekruna, Alexander
Published in EMBO reports (06.12.2022)
Published in EMBO reports (06.12.2022)
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IL-17A-producing CD8+ T cells promote PDAC via induction of inflammatory cancer-associated fibroblasts
Picard, Felix Simon Ruben, Lutz, Veronika, Brichkina, Anna, Neuhaus, Felix, Ruckenbrod, Teresa, Hupfer, Anna, Raifer, Hartmann, Klein, Matthias, Bopp, Tobias, Pfefferle, Petra Ina, Savai, Rajkumar, Prinz, Immo, Waisman, Ari, Moos, Sonja, Chang, Hyun-Dong, Heinrich, Stefan, Bartsch, Detlef K, Buchholz, Malte, Singh, Shiv, Tu, Mengyu, Klein, Lukas, Bauer, Christian, Liefke, Robert, Burchert, Andreas, Chung, Ho-Ryun, Mayer, Philipp, Gress, Thomas M, Lauth, Matthias, Gaida, Matthias, Huber, Magdalena
Published in Gut (01.08.2023)
Published in Gut (01.08.2023)
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reChIP-seq reveals widespread bivalency of H3K4me3 and H3K27me3 in CD4+ memory T cells
Kinkley, Sarah, Helmuth, Johannes, Polansky, Julia K., Dunkel, Ilona, Gasparoni, Gilles, Fröhler, Sebastian, Chen, Wei, Walter, Jörn, Hamann, Alf, Chung, Ho-Ryun
Published in Nature communications (17.08.2016)
Published in Nature communications (17.08.2016)
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Mass cytometry‐based identification of a unique T‐cell signature in childhood allergic asthma
Raifer, Hartmann, Schulz, Axel R., Theodorou, Johanna, Romero‐Olmedo, Addi J., Böck, Andreas, Bertrams, Wilhelm, Schmeck, Bernd T., Chung, Ho‐Ryun, Lohoff, Michael, Chang, Hyun‐Dong, Schaub, Bianca, Mei, Henrik E., Huber, Magdalena
Published in Allergy (Copenhagen) (01.01.2022)
Published in Allergy (Copenhagen) (01.01.2022)
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High-Affinity Sites Form an Interaction Network to Facilitate Spreading of the MSL Complex across the X Chromosome in Drosophila
Ramírez, Fidel, Lingg, Thomas, Toscano, Sarah, Lam, Kin Chung, Georgiev, Plamen, Chung, Ho-Ryun, Lajoie, Bryan R., de Wit, Elzo, Zhan, Ye, de Laat, Wouter, Dekker, Job, Manke, Thomas, Akhtar, Asifa
Published in Molecular cell (01.10.2015)
Published in Molecular cell (01.10.2015)
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Lasp1 regulates adherens junction dynamics and fibroblast transformation in destructive arthritis
Beckmann, Denise, Römer-Hillmann, Anja, Krause, Annika, Hansen, Uwe, Wehmeyer, Corinna, Intemann, Johanna, de Gorter, David J. J., Dankbar, Berno, Hillen, Jan, Heitzmann, Marianne, Begemann, Isabell, Galic, Milos, Weinhage, Toni, Foell, Dirk, Ai, Rizi, Kremerskothen, Joachim, Kiener, Hans P., Müller, Sylvia, Kamradt, Thomas, Schröder, Christopher, Leitão, Elsa, Horsthemke, Bernhard, Rosenstiel, Philip, Nordström, Karl, Gasparoni, Gilles, Gasparoni, Nina, Walter, Jörn, Li, Na, Yang, Xinyi, Chung, Ho-Ryun, Pavenstädt, Hermann, Lindemann, Nico, Schnittler, Hans J., Wang, Wei, Firestein, Gary S., Pap, Thomas, Korb-Pap, Adelheid
Published in Nature communications (15.06.2021)
Published in Nature communications (15.06.2021)
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Finding associations among histone modifications using sparse partial correlation networks
Lasserre, Julia, Chung, Ho-Ryun, Vingron, Martin
Published in PLoS computational biology (01.09.2013)
Published in PLoS computational biology (01.09.2013)
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Dissecting the role of toll‐like receptor 7 in pancreatic cancer
Stark, Maren, Nicolai, Marina, Tatura, Marina, Keber, Corinna U., Kaufmann, Andreas, Chung, Ho‐Ryun, Slater, Emily P., Heeschen, Christopher, Lawlor, Rita T., Scarpa, Aldo, Bartsch, Detlef K., Gress, Thomas M., Bauer, Stefan, Buchholz, Malte
Published in Cancer medicine (Malden, MA) (01.04.2023)
Published in Cancer medicine (Malden, MA) (01.04.2023)
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The effect of micrococcal nuclease digestion on nucleosome positioning data
Chung, Ho-Ryun, Dunkel, Ilona, Heise, Franziska, Linke, Christian, Krobitsch, Sylvia, Ehrenhofer-Murray, Ann E, Sperling, Silke R, Vingron, Martin
Published in PloS one (29.12.2010)
Published in PloS one (29.12.2010)
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C1q/TNF-Related Protein 3 (CTRP-3) Deficiency of Adipocytes Affects White Adipose Tissue Mass but Not Systemic CTRP-3 Concentrations
Schmid, Andreas, Roderfeld, Martin, Gehl, Jonas, Roeb, Elke, Nist, Andrea, Chung, Ho-Ryun, Stiewe, Thorsten, Karrasch, Thomas, Schäffler, Andreas
Published in International journal of molecular sciences (07.02.2021)
Published in International journal of molecular sciences (07.02.2021)
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CRUP: a comprehensive framework to predict condition-specific regulatory units
Ramisch, Anna, Heinrich, Verena, Glaser, Laura V, Fuchs, Alisa, Yang, Xinyi, Benner, Philipp, Schöpflin, Robert, Li, Na, Kinkley, Sarah, Römer-Hillmann, Anja, Longinotto, John, Heyne, Steffen, Czepukojc, Beate, Kessler, Sonja M, Kiemer, Alexandra K, Cadenas, Cristina, Arrigoni, Laura, Gasparoni, Nina, Manke, Thomas, Pap, Thomas, Pospisilik, John A, Hengstler, Jan, Walter, Jörn, Meijsing, Sebastiaan H, Chung, Ho-Ryun, Vingron, Martin
Published in Genome Biology (08.11.2019)
Published in Genome Biology (08.11.2019)
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coTRaCTE predicts co-occurring transcription factors within cell-type specific enhancers
van Bömmel, Alena, Love, Michael I, Chung, Ho-Ryun, Vingron, Martin
Published in PLoS computational biology (01.08.2018)
Published in PLoS computational biology (01.08.2018)
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Pi-seq—A customizable multichannel syringe pump for microfluidics
Czech, Tim L., Nelson, Philipp P., Thölken, Clemens, Meyer, Patrick, Hess, Timo, Chung, Ho-Ryun, Adhikary, Till
Published in HardwareX (01.06.2024)
Published in HardwareX (01.06.2024)
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Combined Focused Next-Generation Sequencing Assays to Guide Precision Oncology in Solid Tumors: A Retrospective Analysis from an Institutional Molecular Tumor Board
Tarawneh, Thomas S., Rodepeter, Fiona R., Teply-Szymanski, Julia, Ross, Petra, Koch, Vera, Thölken, Clemens, Schäfer, Jonas A., Gremke, Niklas, Mack, Hildegard I. D., Gold, Judith, Riera-Knorrenschild, Jorge, Wilhelm, Christian, Rinke, Anja, Middeke, Martin, Klemmer, Andreas, Romey, Marcel, Hattesohl, Akira, Jesinghaus, Moritz, Görg, Christian, Figiel, Jens, Chung, Ho-Ryun, Wündisch, Thomas, Neubauer, Andreas, Denkert, Carsten, Mack, Elisabeth K. M.
Published in Cancers (01.09.2022)
Published in Cancers (01.09.2022)
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EPIGENE: genome-wide transcription unit annotation using a multivariate probabilistic model of histone modifications
Sahu, Anshupa, Li, Na, Dunkel, Ilona, Chung, Ho-Ryun
Published in Epigenetics & chromatin (07.04.2020)
Published in Epigenetics & chromatin (07.04.2020)
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Epigenomic Co-localization and Co-evolution Reveal a Key Role for 5hmC as a Communication Hub in the Chromatin Network of ESCs
Juan, David, Perner, Juliane, Carrillo de Santa Pau, Enrique, Marsili, Simone, Ochoa, David, Chung, Ho-Ryun, Vingron, Martin, Rico, Daniel, Valencia, Alfonso
Published in Cell reports (Cambridge) (09.02.2016)
Published in Cell reports (Cambridge) (09.02.2016)
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Antagonistic action of Bicoid and the repressor Capicua determines the spatial limits of Drosophila head gene expression domains
Löhr, Ulrike, Chung, Ho-Ryun, Beller, Mathias, Jäckle, Herbert
Published in Proceedings of the National Academy of Sciences - PNAS (22.12.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (22.12.2009)
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