genomic basis of trophic strategy in marine bacteria
Lauro, Federico M, McDougald, Diane, Thomas, Torsten, Williams, Timothy J, Egan, Suhelen, Rice, Scott, DeMaere, Matthew Z, Ting, Lily, Ertan, Haluk, Johnson, Justin, Ferriera, Steven, Lapidus, Alla, Anderson, Iain, Kyrpides, Nikos, Munk, A. Christine, Detter, Chris, Han, Cliff S, Brown, Mark V, Robb, Frank T, Kjelleberg, Staffan, Cavicchioli, Ricardo
Published in Proceedings of the National Academy of Sciences - PNAS (15.09.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (15.09.2009)
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Journal Article
Temperature regulation of virulence factors in the pathogen Vibrio coralliilyticus
Kimes, Nikole E, Grim, Christopher J, Johnson, Wesley R, Hasan, Nur A, Tall, Ben D, Kothary, Mahendra H, Kiss, Hajnalka, Munk, A Christine, Tapia, Roxanne, Green, Lance, Detter, Chris, Bruce, David C, Brettin, Thomas S, Colwell, Rita R, Morris, Pamela J
Published in The ISME Journal (01.04.2012)
Published in The ISME Journal (01.04.2012)
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Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae
Chun, Jongsik, Grim, Christopher J, Hasan, Nur A, Lee, Je Hee, Choi, Seon Young, Haley, Bradd J, Taviani, Elisa, Jeon, Yoon-Seong, Kim, Dong Wook, Lee, Jae-Hak, Brettin, Thomas S, Bruce, David C, Challacombe, Jean F, Detter, J. Chris, Han, Cliff S, Munk, A. Christine, Chertkov, Olga, Meincke, Linda, Saunders, Elizabeth, Walters, Ronald A, Huq, Anwar, Nair, G. Balakrish, Colwell, Rita R
Published in Proceedings of the National Academy of Sciences - PNAS (08.09.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (08.09.2009)
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Journal Article
Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids
Smith, Theresa J, Hill, Karen K, Foley, Brian T, Detter, John C, Munk, A Christine, Bruce, David C, Doggett, Norman A, Smith, Leonard A, Marks, James D, Xie, Gary, Brettin, Thomas S
Published in PloS one (05.12.2007)
Published in PloS one (05.12.2007)
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Journal Article
Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species
Hasan, Nur A, Grim, Christopher J, Lipp, Erin K, Rivera, Irma N G, Chun, Jongsik, Haley, Bradd J, Taviani, Elisa, Choi, Seon Young, Hoq, Mozammel, Munk, A Christine, Brettin, Thomas S, Bruce, David, Challacombe, Jean F, Detter, J Chris, Han, Cliff S, Eisen, Jonathan A, Huq, Anwar, Colwell, Rita R
Published in Proceedings of the National Academy of Sciences - PNAS (26.05.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (26.05.2015)
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Improving genome assemblies by sequencing PCR products with PacBio
Zhang, Xiaojing, Davenport, Karen W, Gu, Wei, Daligault, Hajnalka E, Munk, A. Christine, Tashima, Hazuki, Reitenga, Krista, Green, Lance D, Han, Cliff S
Published in BioTechniques (01.07.2012)
Published in BioTechniques (01.07.2012)
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Journal Article
Genome of Polaromonas sp. Strain JS666: Insights into the Evolution of a Hydrocarbon- and Xenobiotic-Degrading Bacterium, and Features of Relevance to Biotechnology
Mattes, Timothy E, Alexander, Anne K, Richardson, Paul M, Munk, A. Christine, Han, Cliff S, Stothard, Paul, Coleman, Nicholas V
Published in Applied and Environmental Microbiology (01.10.2008)
Published in Applied and Environmental Microbiology (01.10.2008)
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Journal Article
Complete genome sequences for 35 biothreat assay-relevant bacillus species
Johnson, Shannon L, Daligault, Hajnalka E, Davenport, Karen W, Jaissle, James, Frey, Kenneth G, Ladner, Jason T, Broomall, Stacey M, Bishop-Lilly, Kimberly A, Bruce, David C, Gibbons, Henry S, Coyne, Susan R, Lo, Chien-Chi, Meincke, Linda, Munk, A Christine, Koroleva, Galina I, Rosenzweig, C Nicole, Palacios, Gustavo F, Redden, Cassie L, Minogue, Timothy D, Chain, Patrick S
Published in Genome announcements (Washington, DC) (30.04.2015)
Published in Genome announcements (Washington, DC) (30.04.2015)
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Journal Article
Genome Sequence of Streptomyces griseus Strain XylebKG-1, an Ambrosia Beetle-Associated Actinomycete
GRUBBS, Kirk J, BIEDERMANN, Peter H. W, DETTER, Chris, TAPIA, Roxanne, HAN, Cliff S, CURRIE, Cameron R, SUEN, Garret, ADAMS, Sandra M, MOELLER, Joseph A, KLASSEN, Jonathan L, GOODWIN, Lynne A, WOYKE, Tanja, CHRISTINE MUNK, A, BRUCE, David
Published in Journal of Bacteriology (01.06.2011)
Published in Journal of Bacteriology (01.06.2011)
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A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions
TUANYOK, Apichai, AUERBACH, Raymond K, PEACOCK, Sharon J, CURRIE, Bart J, KEIM, Paul, WAGNER, David M, BRETTIN, Thomas S, BRUCE, David C, MUNK, A. Christine, DETTER, J. Chris, PEARSON, Talima, HORNSTRA, Heidie, SERMSWAN, Rasana W, WUTHIEKANUN, Vanaporn
Published in Journal of Bacteriology (01.12.2007)
Published in Journal of Bacteriology (01.12.2007)
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Comparative genomics of clinical and environmental Vibrio mimicus
Hasan, Nur A., Grim, Christopher J., Haley, Bradd J., Chun, Jongsik, Alam, Munirul, Taviani, Elisa, Hoq, Mozammel, Munk, A. Christine, Saunders, Elizabeth, Brettin, Thomas S., Bruce, David C., Challacombe, Jean F., Detter, J. Chris, Han, Cliff S., Xie, Gary, Nair, G. Balakrish, Huq, Anwar, Colwell, Rita R.
Published in Proceedings of the National Academy of Sciences - PNAS (07.12.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (07.12.2010)
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Closing bacterial genomic sequence gaps with adaptor-PCR
Rogers, Yvonne C, Christine Munk, A, Meincke, Linda J, Han, Cliff S
Published in BioTechniques (01.07.2005)
Published in BioTechniques (01.07.2005)
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Journal Article
Pathogenomic Sequence Analysis of Bacillus cereus and Bacillus thuringiensis Isolates Closely Related to Bacillus anthracis
HAN, Cliff S, XIE, Gary, CLELAND, Cathy, DIMITRIJEVIC, Mira, DOGGETT, Norman A, FAWCETT, John J, GLAVINA, Tijana, GOODWIN, Lynne A, HILL, Karen K, HITCHCOCK, Penny, JACKSON, Paul J, KEIM, Paul, CHALLACOMBE, Jean F, KEWALRAMANI, Avinash Ramesh, LONGMIRE, Jon, LUCAS, Susan, MALFATTI, Stephanie, MCMURRY, Kim, MEINCKE, Linda J, MISRA, Monica, MOSEMAN, Bernice L, MUNDT, Mark, MUNK, A. Christine, ALTHERR, Michael R, OKINAKA, Richard T, PARSON-QUINTANA, B, REILLY, Lee Philip, RICHARDSON, Paul, ROBINSON, Donna L, RUBIN, Eddy, SAUNDERS, Elizabeth, TAPIA, Roxanne, TESMER, Judith G, THAYER, Nina, BHOTIKA, Smriti S, THOMPSON, Linda S, TICE, Hope, TICKNOR, Lawrence O, WILLS, Patti L, BRETTIN, Thomas S, GILNA, Paul, BRUCE, David, CAMPBELL, Connie S, CAMPBELL, Mary L, JIN CHEN, CHERTKOV, Olga
Published in Journal of Bacteriology (01.05.2006)
Published in Journal of Bacteriology (01.05.2006)
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Journal Article
Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica
Johnson, Shannon L, Daligault, Hajnalka E, Davenport, Karen W, Jaissle, James, Frey, Kenneth G, Ladner, Jason T, Broomall, Stacey M, Bishop-Lilly, Kimberly A, Bruce, David C, Coyne, Susan R, Gibbons, Henry S, Lo, Chien-Chi, Munk, A Christine, Rosenzweig, C Nicole, Koroleva, Galina I, Palacios, Gustavo F, Redden, Cassie L, Xu, Yan, Minogue, Timothy D, Chain, Patrick S
Published in Genome announcements (Washington, DC) (30.04.2015)
Published in Genome announcements (Washington, DC) (30.04.2015)
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Journal Article
Correction for Johnson et al., "Complete Genome Sequences for 35 Biothreat Assay-Relevant Bacillus Species"
Johnson, Shannon L, Daligault, Hajnalka E, Davenport, Karen W, Jaissle, James, Frey, Kenneth G, Ladner, Jason T, Broomall, Stacey M, Bishop-Lilly, Kimberly A, Bruce, David C, Gibbons, Henry S, Coyne, Susan R, Lo, Chien-Chi, Meincke, Linda, Munk, A Christine, Koroleva, Galina I, Rosenzweig, C Nicole, Palacios, Gustavo F, Redden, Cassie L, Minogue, Timothy D, Chain, Patrick S
Published in Genome announcements (Washington, DC) (18.01.2018)
Published in Genome announcements (Washington, DC) (18.01.2018)
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Complete genome sequence of Tsukamurella paurometabola type strain (no. 33)
Munk, A Christine, Lapidus, Alla, Lucas, Susan, Nolan, Matt, Tice, Hope, Cheng, Jan-Fang, Del Rio, Tijana Glavina, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Huntemann, Marcel, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Tapia, Roxanne, Han, Cliff, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D, Brettin, Thomas, Yasawong, Montri, Brambilla, Evelyne-Marie, Rohde, Manfred, Sikorski, Johannes, Göker, Markus, Detter, John C, Woyke, Tanja, Bristow, James, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter
Published in Standards in genomic sciences (01.01.2011)
Published in Standards in genomic sciences (01.01.2011)
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Journal Article
Complete genome sequence of Rhodospirillum rubrum type strain (S1T)
Munk, A. Christine, Copeland, Alex, Lucas, Susan, Lapidus, Alla, Del Rio, Tijana Glavina, Barry, Kerrie, Detter, John C., Hammon, Nancy, Israni, Sanjay, Pitluck, Sam, Brettin, Thomas, Bruce, David, Han, Cliff, Tapia, Roxanne, Gilna, Paul, Schmutz, Jeremy, Larimer, Frank, Land, Miriam, Kyrpides, Nikos C., Mavromatis, Konstantinos, Richardson, Paul, Rohde, Manfred, Göker, Markus, Klenk, Hans-Peter, Zhang, Yaoping, Roberts, Gary P., Reslewic, Susan, Schwartz, David C.
Published in Standards in genomic sciences (30.06.2011)
Published in Standards in genomic sciences (30.06.2011)
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Complete genome sequence of Allochromatium vinosum DSM 180(T)
Weissgerber, Thomas, Zigann, Renate, Bruce, David, Chang, Yun-Juan, Detter, John C, Han, Cliff, Hauser, Loren, Jeffries, Cynthia D, Land, Miriam, Munk, A Christine, Tapia, Roxanne, Dahl, Christiane
Published in Standards in genomic sciences (31.12.2011)
Published in Standards in genomic sciences (31.12.2011)
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Journal Article
Complete genome sequence of Rhodospirillum rubrum type strain (S1)
Munk, A Christine, Copeland, Alex, Lucas, Susan, Lapidus, Alla, Del Rio, Tijana Glavina, Barry, Kerrie, Detter, John C, Hammon, Nancy, Israni, Sanjay, Pitluck, Sam, Brettin, Thomas, Bruce, David, Han, Cliff, Tapia, Roxanne, Gilna, Paul, Schmutz, Jeremy, Larimer, Frank, Land, Miriam, Kyrpides, Nikos C, Mavromatis, Konstantinos, Richardson, Paul, Rohde, Manfred, Göker, Markus, Klenk, Hans-Peter, Zhang, Yaoping, Roberts, Gary P, Reslewic, Susan, Schwartz, David C
Published in Standards in genomic sciences (01.07.2011)
Published in Standards in genomic sciences (01.07.2011)
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Journal Article
Deep-sea hydrothermal vent bacteria related to human pathogenicVibriospecies
Hasan, Nur A., Grim, Christopher J., Lipp, Erin K., Rivera, Irma N. G., Chun, Jongsik, Haley, Bradd J., Taviani, Elisa, Choi, Seon Young, Hoq, Mozammel, Munk, A. Christine, Brettin, Thomas S., Bruce, David, Challacombe, Jean F., Detter, J. Chris, Han, Cliff S., Eisen, Jonathan A., Huq, Anwar, Colwell, Rita R.
Published in Proceedings of the National Academy of Sciences - PNAS (26.05.2015)
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Published in Proceedings of the National Academy of Sciences - PNAS (26.05.2015)
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