Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry
Collins, Ben C., Hunter, Christie L., Liu, Yansheng, Schilling, Birgit, Rosenberger, George, Bader, Samuel L., Chan, Daniel W., Gibson, Bradford W., Gingras, Anne-Claude, Held, Jason M., Hirayama-Kurogi, Mio, Hou, Guixue, Krisp, Christoph, Larsen, Brett, Lin, Liang, Liu, Siqi, Molloy, Mark P., Moritz, Robert L., Ohtsuki, Sumio, Schlapbach, Ralph, Selevsek, Nathalie, Thomas, Stefani N., Tzeng, Shin-Cheng, Zhang, Hui, Aebersold, Ruedi
Published in Nature communications (21.08.2017)
Published in Nature communications (21.08.2017)
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Journal Article
Generation of High-Quality SWATH ® Acquisition Data for Label-free Quantitative Proteomics Studies Using TripleTOF ® Mass Spectrometers
Schilling, Birgit, Gibson, Bradford W, Hunter, Christie L
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
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Journal Article
The Paragon Algorithm, a Next Generation Search Engine That Uses Sequence Temperature Values and Feature Probabilities to Identify Peptides from Tandem Mass Spectra
Shilov, Ignat V., Seymour, Sean L., Patel, Alpesh A., Loboda, Alex, Tang, Wilfred H., Keating, Sean P., Hunter, Christie L., Nuwaysir, Lydia M., Schaeffer, Daniel A.
Published in Molecular & cellular proteomics (01.09.2007)
Published in Molecular & cellular proteomics (01.09.2007)
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Journal Article
Mitotic deacetylase complex (MiDAC) recognizes the HIV-1 core promoter to control activated viral gene expression
Wilhelm, Emmanuelle, Poirier, Mikaël, Da Rocha, Morgane, Bédard, Mikaël, McDonald, Patrick P, Lavigne, Pierre, Hunter, Christie L, Bell, Brendan
Published in PLoS pathogens (01.05.2024)
Published in PLoS pathogens (01.05.2024)
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Journal Article
Acoustic ejection mass spectrometry empowers ultra-fast protein biomarker quantification
Van Puyvelde, Bart, Hunter, Christie L., Zhgamadze, Maxim, Savant, Sudha, Wang, Y. Oliver, Hoedt, Esthelle, Raedschelders, Koen, Pope, Matt, Huynh, Carissa A., Ramanujan, V. Krishnan, Tourtellotte, Warren, Razavi, Morteza, Anderson, N. Leigh, Martens, Geert, Deforce, Dieter, Fu, Qin, Dhaenens, Maarten, Van Eyk, Jennifer E.
Published in Nature communications (15.06.2024)
Published in Nature communications (15.06.2024)
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Journal Article
A comparison of MS/MS‐based, stable‐isotope‐labeled, quantitation performance on ESI‐quadrupole TOF and MALDI‐TOF/TOF mass spectrometers
Kuzyk, Michael A., Ohlund, Leanne B., Elliott, Monica H., Smith, Derek, Qian, Hong, Delaney, Allen, Hunter, Christie L., Borchers, Christoph H.
Published in Proteomics (Weinheim) (01.06.2009)
Published in Proteomics (Weinheim) (01.06.2009)
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Journal Article
Perspectives and opinions from scientific leaders on the evolution of data-independent acquisition for quantitative proteomics and novel biological applications
Hunter, Christie L., Bons, Joanna, Schilling, Birgit
Published in Australian journal of chemistry (19.07.2023)
Published in Australian journal of chemistry (19.07.2023)
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Journal Article
Coupled Global and Targeted Proteomics of Human Embryonic Stem Cells during Induced Differentiation
Yocum, Anastasia K., Gratsch, Theresa E., Leff, Nancy, Strahler, John R., Hunter, Christie L., Walker, Angela K., Michailidis, George, Omenn, Gilbert S., O'Shea, K. Sue, Andrews, Philip C.
Published in Molecular & cellular proteomics (01.04.2008)
Published in Molecular & cellular proteomics (01.04.2008)
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Journal Article
Localization and Quantification of Post-Translational Modifications of Proteins Using Electron Activated Dissociation Fragmentation on a Fast-Acquisition Time-of-Flight Mass Spectrometer
Bons, Joanna, Hunter, Christie L., Chupalov, Rita, Causon, Jason, Antonoplis, Alexandra, Rose, Jacob, MacLean, Brendan, Schilling, Birgit
Published in Journal of the American Society for Mass Spectrometry (04.10.2023)
Published in Journal of the American Society for Mass Spectrometry (04.10.2023)
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Journal Article
Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses
Rosenberger, George, Bludau, Isabell, Schmitt, Uwe, Heusel, Moritz, Hunter, Christie L, Liu, Yansheng, MacCoss, Michael J, MacLean, Brendan X, Nesvizhskii, Alexey I, Pedrioli, Patrick G A, Reiter, Lukas, Röst, Hannes L, Tate, Stephen, Ting, Ying S, Collins, Ben C, Aebersold, Ruedi
Published in Nature methods (01.09.2017)
Published in Nature methods (01.09.2017)
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Journal Article
Highly Reproducible Automated Proteomics Sample Preparation Workflow for Quantitative Mass Spectrometry
Fu, Qin, Kowalski, Michael P, Mastali, Mitra, Parker, Sarah J, Sobhani, Kimia, van den Broek, Irene, Hunter, Christie L, Van Eyk, Jennifer E
Published in Journal of proteome research (05.01.2018)
Published in Journal of proteome research (05.01.2018)
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Journal Article
Multiplexed, Scheduled, High-Resolution Parallel Reaction Monitoring on a Full Scan QqTOF Instrument with Integrated Data-Dependent and Targeted Mass Spectrometric Workflows
Schilling, Birgit, MacLean, Brendan, Held, Jason M, Sahu, Alexandria K, Rardin, Matthew J, Sorensen, Dylan J, Peters, Theodore, Wolfe, Alan J, Hunter, Christie L, MacCoss, Michael J, Gibson, Bradford W
Published in Analytical chemistry (Washington) (20.10.2015)
Published in Analytical chemistry (Washington) (20.10.2015)
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Journal Article
Substantial downregulation of mitochondrial and peroxisomal proteins during acute kidney injury revealed by data‐independent acquisition proteomics
Burton, Jordan B., Silva‐Barbosa, Anne, Bons, Joanna, Rose, Jacob, Pfister, Katherine, Simona, Fabia, Gandhi, Tejas, Reiter, Lukas, Bernhardt, Oliver, Hunter, Christie L., Goetzman, Eric S., Sims‐Lucas, Sunder, Schilling, Birgit
Published in Proteomics (Weinheim) (01.03.2024)
Published in Proteomics (Weinheim) (01.03.2024)
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Journal Article
Mapping Citrullinated Sites in Multiple Organs of Mice Using Hypercitrullinated Library
Fert-Bober, Justyna, Venkatraman, Vidya, Hunter, Christie L, Liu, Ruining, Crowgey, Erin L, Pandey, Rakhi, Holewinski, Ronald J, Stotland, Aleksandr, Berman, Benjamin P, Van Eyk, Jennifer E
Published in Journal of proteome research (03.05.2019)
Published in Journal of proteome research (03.05.2019)
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Journal Article
Total Chemical Synthesis of a Functional Interacting Protein Pair: The Protooncogene H-Ras and the Ras-Binding Domain of Its Effector c-Raf1
Christian F. W. Becker, Hunter, Christie L., Seidel, Ralf, Stephen B. H. Kent, Goody, Roger S., Engelhard, Martin
Published in Proceedings of the National Academy of Sciences - PNAS (29.04.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (29.04.2003)
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Journal Article
Quantitative protein determination for CYP induction via LC-MS/MS
Williamson, Brian L., Purkayastha, Subhasish, Hunter, Christie L., Nuwaysir, Lydia, Hill, James, Easterwood, LaHoma, Hill, Jeanette
Published in Proteomics (Weinheim) (01.01.2011)
Published in Proteomics (Weinheim) (01.01.2011)
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Journal Article
Introduction and Characterization of a Functionally Linked Metal Ion Binding Site at the Exposed Heme Edge of Myoglobin
Hunter, Christie L., Maurus, Robert, Mauk, Marcia R., Lee, Hung, Raven, Emma L., Tong, Harry, Nguyen, Nham, Smith, Michael, Brayer, Gary D., Mauk, A. Grant
Published in Proceedings of the National Academy of Sciences - PNAS (01.04.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (01.04.2003)
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Journal Article