Global-level population genomics reveals differential effects of geography and phylogeny on horizontal gene transfer in soil bacteria
Greenlon, Alex, Chang, Peter L., Damtew, Zehara Mohammed, Muleta, Atsede, Carrasquilla-Garcia, Noelia, Kim, Donghyun, Nguyen, Hien P., Suryawanshi, Vasantika, Krieg, Christopher P., Yadav, Sudheer Kumar, Patel, Jai Singh, Mukherjee, Arpan, Udupa, Sripada, Benjelloun, Imane, Thami-Alami, Imane, Yasin, Mohammad, Patil, Bhuvaneshwara, Singh, Sarvjeet, Sarma, Birinchi Kumar, von Wettberg, Eric J. B., Kahraman, Abdullah, Bukun, Bekir, Assefa, Fassil, Tesfaye, Kassahun, Fikre, Asnake, Cook, Douglas R.
Published in Proceedings of the National Academy of Sciences - PNAS (23.07.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (23.07.2019)
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Targeted phasing of 2–200 kilobase DNA fragments with a short-read sequencer and a single-tube linked-read library method
Mikhaylova, Veronika, Rzepka, Madison, Kawamura, Tetsuya, Xia, Yu, Chang, Peter L., Zhou, Shiguo, Paasch, Amber, Pham, Long, Modi, Naisarg, Yao, Likun, Perez-Agustin, Adrian, Pagans, Sara, Boles, T. Christian, Lei, Ming, Wang, Yong, Garcia-Bassets, Ivan, Chen, Zhoutao
Published in Scientific reports (05.04.2024)
Published in Scientific reports (05.04.2024)
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Journal Article
Somatic sex-specific transcriptome differences in Drosophila revealed by whole transcriptome sequencing
Chang, Peter L, Dunham, Joseph P, Nuzhdin, Sergey V, Arbeitman, Michelle N
Published in BMC genomics (14.07.2011)
Published in BMC genomics (14.07.2011)
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Predictive genotype-phenotype relations using genetic diversity in African yam bean (Sphenostylis stenocarpa (Hochst. ex. A. Rich) Harms)
Aina, Ademola, Garcia-Oliveira, Ana Luísa, Ilori, Christopher, Chang, Peter L, Yusuf, Muyideen, Oyatomi, Olaniyi, Abberton, Michael, Potter, Daniel
Published in BMC plant biology (20.11.2021)
Published in BMC plant biology (20.11.2021)
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Journal Article
Development of F1 hybrid population and the high-density linkage map for European aspen (Populus tremula L.) using RADseq technology
Zhigunov, Anatoly V, Ulianich, Pavel S, Lebedeva, Marina V, Chang, Peter L, Nuzhdin, Sergey V, Potokina, Elena K
Published in BMC plant biology (14.11.2017)
Published in BMC plant biology (14.11.2017)
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Journal Article
Genomic and phenotypic analysis of Vavilov’s historic landraces reveals the impact of environment and genomic islands of agronomic traits
Plekhanova, Elena, Vishnyakova, Margarita A., Bulyntsev, Sergey, Chang, Peter L., Carrasquilla-Garcia, Noelia, Negash, Kassaye, Wettberg, Eric von, Noujdina, Nina, Cook, Douglas R., Samsonova, Maria G., Nuzhdin, Sergey V.
Published in Scientific reports (06.07.2017)
Published in Scientific reports (06.07.2017)
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Journal Article
Genomic Analysis of Vavilov's Historic Chickpea Landraces Reveals Footprints of Environmental and Human Selection
Sokolkova, Alena, Bulyntsev, Sergey V, Chang, Peter L, Carrasquilla-Garcia, Noelia, Igolkina, Anna A, Noujdina, Nina V, von Wettberg, Eric, Vishnyakova, Margarita A, Cook, Douglas R, Nuzhdin, Sergey V, Samsonova, Maria G
Published in International journal of molecular sciences (31.05.2020)
Published in International journal of molecular sciences (31.05.2020)
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Journal Article
Expression of fatty acid and triacylglycerol synthesis genes in interspecific hybrids of oil palm
Ting, Ngoot-Chin, Sherbina, Katrina, Khoo, Jia-Shiun, Kamaruddin, Katialisa, Chan, Pek-Lan, Chan, Kuang-Lim, Halim, Mohd Amin Ab, Sritharan, Kandha, Yaakub, Zulkifli, Mayes, Sean, Massawe, Festo, Chang, Peter L., Nuzhdin, Sergey V., Sambanthamurthi, Ravigadevi, Singh, Rajinder
Published in Scientific reports (01.10.2020)
Published in Scientific reports (01.10.2020)
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Journal Article
Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus
Fu, Shuhua, Chang, Peter L, Friesen, Maren L, Teakle, Natasha L, Tarone, Aaron M, Sze, Sing-Hoi
Published in BMC genomics (06.06.2019)
Published in BMC genomics (06.06.2019)
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Journal Article
The brain transcriptome of the wolf spider, Schizocosa ocreata
Stribling, Daniel, Chang, Peter L, Dalton, Justin E, Conow, Christopher A, Rosenthal, Malcolm, Hebets, Eileen, Graze, Rita M, Arbeitman, Michelle N
Published in BMC research notes (23.06.2021)
Published in BMC research notes (23.06.2021)
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Journal Article
The Drosophila Post-mating Response: Gene Expression and Behavioral Changes Reveal Perdurance and Variation in Cross-Tissue Interactions
Newell, Nicole R, Ray, Surjyendu, Dalton, Justin E, Fortier, Julia C, Kao, Joyce Y, Chang, Peter L, Nuzhdin, Sergey V, Arbeitman, Michelle N
Published in G3 : genes - genomes - genetics (01.03.2020)
Published in G3 : genes - genomes - genetics (01.03.2020)
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Journal Article
The ecological genomic basis of salinity adaptation in Tunisian Medicago truncatula
Friesen, Maren L, von Wettberg, Eric J B, Badri, Mounawer, Moriuchi, Ken S, Barhoumi, Fathi, Chang, Peter L, Cuellar-Ortiz, Sonia, Cordeiro, Matilde A, Vu, Wendy T, Arraouadi, Soumaya, Djébali, Naceur, Zribi, Kais, Badri, Yazid, Porter, Stephanie S, Aouani, Mohammed Elarbi, Cook, Douglas R, Strauss, Sharon Y, Nuzhdin, Sergey V
Published in BMC genomics (22.12.2014)
Published in BMC genomics (22.12.2014)
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Journal Article
Functional Dissection of the Chickpea ( Cicer arietinum L. ) Stay-Green Phenotype Associated with Molecular Variation at an Ortholog of Mendel's I Gene for Cotyledon Color: Implications for Crop Production and Carotenoid Biofortification
Sivasakthi, Kaliamoorthy, Marques, Edward, Kalungwana, Ng'andwe, Carrasquilla-Garcia, Noelia, Chang, Peter L, Bergmann, Emily M, Bueno, Erika, Cordeiro, Matilde, Sani, Syed Gul A S, Udupa, Sripada M, Rather, Irshad A, Rouf Mir, Reyazul, Vadez, Vincent, Vandemark, George J, Gaur, Pooran M, Cook, Douglas R, Boesch, Christine, von Wettberg, Eric J B, Kholova, Jana, Penmetsa, R Varma
Published in International journal of molecular sciences (07.11.2019)
Published in International journal of molecular sciences (07.11.2019)
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Journal Article
Wolbachia is not all about sex: male-feminizing Wolbachia alters the leafhopper Zyginidia pullula transcriptome in a mainly sex-independent manner
Asgharian, Hosseinali, Chang, Peter L, Mazzoglio, Peter J, Negri, Ilaria
Published in Frontiers in microbiology (01.09.2014)
Published in Frontiers in microbiology (01.09.2014)
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Journal Article
The complete mitochondrial genome of the grooved carpet shell, Ruditapes decussatus (Bivalvia, Veneridae)
Ghiselli, Fabrizio, Milani, Liliana, Iannello, Mariangela, Procopio, Emanuele, Chang, Peter L, Nuzhdin, Sergey V, Passamonti, Marco
Published in PeerJ (San Francisco, CA) (22.08.2017)
Published in PeerJ (San Francisco, CA) (22.08.2017)
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Journal Article
Sex-specific signaling in the blood-brain barrier is required for male courtship in Drosophila
Hoxha, Valbona, Lama, Chamala, Chang, Peter L, Saurabh, Sumit, Patel, Naiya, Olate, Nicole, Dauwalder, Brigitte
Published in PLoS genetics (01.01.2013)
Published in PLoS genetics (01.01.2013)
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Journal Article
The Genetic Basis of Baculum Size and Shape Variation in Mice
Schultz, Nicholas G, Ingels, Jesse, Hillhouse, Andrew, Wardwell, Keegan, Chang, Peter L, Cheverud, James M, Lutz, Cathleen, Lu, Lu, Williams, Robert W, Dean, Matthew D
Published in G3 : genes - genomes - genetics (01.05.2016)
Published in G3 : genes - genomes - genetics (01.05.2016)
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Journal Article
Screening of heat‐tolerant Ethiopian chickpea accessions: Assessment of phenological and agromorphological traits and genomic relationships
Getahun, Tsegaye, Negash, Kassaye, Chang, Peter L., Wettberg, Eric, Carrasquilla‐Garcia, Noelia, Gaur, Pooran M., Fikre, Asnake, Haileslassie, Teklehaimanot, Cook, Douglas, Tesfaye, Kassahun
Published in Agrosystems, geosciences & environment (2021)
Published in Agrosystems, geosciences & environment (2021)
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